SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08951  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007726
Annotation
PREDICTED:_mitochondrial_chaperone_BCS1_[Plutella_xylostella]
Location in the cell
Mitochondrial   Reliability : 2.592
 

Sequence

CDS
ATGACTATCGTAGAATATATGGCTTCTTTAGCCCAAAATCCGTATTTTGGTGCAGGTTTTGGACTTTTCGGTGTAGGTGCAAGTGCAGCTATTCTACGAAAAGGATTGCAGACTTCAATGGTATTATTTAGAAGGCATTGTATGATAACCCTTGAAGTTCCATGCAGAGATAAATCCTATCAATGGCTATTACAATGGATTACACAAAAAGGAGCAAGAAAAACTCAACATCTAAGTGTCGAGACTTCTTTTGAACAAAAAGATTCTGGACAGATAAGAACTAAATACGACTTTATTCCTAGTGTTGGCCAACACTTTTTCCGATATGGTGGAACATGGATAAGAGTAGACCGTACAAGGGAACAGCAGACTTTGGACCTGCATATGGGGATACCATGGGAAACGGTAACATTAACTTCATTTGGCAGAAACAAGCAATTATATTATGGAATTCTAGAAGAAGCTAGAACAATGGCTCTCAAACAACATGAAGGTATGACAGTTATGTACACCGCAATGGGCTCTGAGTGGCGACCCTTTGGACACCCTCGTCGGCGCCGACCTATACACAGTGTAGTTCTTCGATCAGGATTAACAGAACGGATAGTTGCTGACTGTTTAGACTTCATTAATAACCCACAATGGTATACAGACCGTGGAATACCCTATAGAAGAGGCTATTTGCTTTATGGGCCACCGGGCTGCGGAAAATCTTCATTTATCATGGCATTAGCAGGAGAACTAGAATACAATATTTGTGTGCTCAACTTATCTGAACGAGGCTTAACAGATGATCGATTAAATCATTTGCTGAGTGTAGCTCCGCAACAGTCTATAATCTTACTTGAAGACATAGATGCGGCGTTTGTGTCCCGCGAGGACACGCCGACCCAGAAAGCGGCATACGAAGGTCTCAATCGCGTTACGTTTAGCGGACTGCTGAACTGTTTGGATGGCGTTGCGTCAACCGAAGCACGGATCGTCTTTATGACGACGAACTATTTGGAGAGGCTTGATCCGGCCCTGATCAGGCCAGGGCGTGTAGATATGAAAGAATACGTTGGATACTGCAACCAAGAACAGGTCGAACTAATGTTCTTAAGATTTTACAAAGGAGAAAAAGCGGCTGACCATGCTAAAACGTTTGCCGAAAAAGTAATGGAAGTAAAAAAAGAAGTCAGTCCAGCACAAATTCAAGGATACTTTATGTTTCATAAACATTCACCCCCAGAGGACGTATTGATGGATGTTAAATCAATATGGACGCTAGGATAA
Protein
MTIVEYMASLAQNPYFGAGFGLFGVGASAAILRKGLQTSMVLFRRHCMITLEVPCRDKSYQWLLQWITQKGARKTQHLSVETSFEQKDSGQIRTKYDFIPSVGQHFFRYGGTWIRVDRTREQQTLDLHMGIPWETVTLTSFGRNKQLYYGILEEARTMALKQHEGMTVMYTAMGSEWRPFGHPRRRRPIHSVVLRSGLTERIVADCLDFINNPQWYTDRGIPYRRGYLLYGPPGCGKSSFIMALAGELEYNICVLNLSERGLTDDRLNHLLSVAPQQSIILLEDIDAAFVSREDTPTQKAAYEGLNRVTFSGLLNCLDGVASTEARIVFMTTNYLERLDPALIRPGRVDMKEYVGYCNQEQVELMFLRFYKGEKAADHAKTFAEKVMEVKKEVSPAQIQGYFMFHKHSPPEDVLMDVKSIWTLG

Summary

Similarity
Belongs to the AAA ATPase family.
EMBL
BABH01002603    NWSH01000740    PCG74480.1    RSAL01000370    RVE42146.1    ODYU01007669    + More
SOQ50652.1    AGBW02008599    OWR52938.1    KQ460615    KPJ13551.1    KQ459602    KPI93307.1    NEVH01003007    PNF40850.1    KQ971342    EFA03729.1    KK852880    KDR14433.1    APGK01026292    KB740624    KB632335    ENN79957.1    ERL92797.1    GEZM01039704    JAV81279.1    AAAB01008880    EAA08672.3    GEDC01017655    JAS19643.1    CH477727    EAT36833.1    JXUM01116198    KQ565958    KXJ70494.1    AXCN02001559    AXCM01004697    ATLV01024805    KE525361    KFB51948.1    ADMH02002109    ETN58949.1    GFDL01013170    JAV21875.1    DS232266    EDS38781.1    ADTU01021804    KQ976417    KYM89785.1    KZ288310    PBC28647.1    KQ983031    KYQ48118.1    KQ980843    KYN12289.1    KK107128    QOIP01000006    EZA58377.1    RLU21279.1    GL451531    EFN79106.1    KQ981953    KYN32456.1    GL888384    EGI61874.1    KQ978062    KYM97716.1    AJVK01024878    LBMM01003210    KMQ93804.1    APCN01005034    KQ414583    KOC70783.1    JRES01001695    KNC20885.1    GECZ01013025    JAS56744.1    GAMC01001619    JAC04937.1    CP012523    ALC39204.1    CH916372    EDV98872.1    GAKP01009694    JAC49258.1    GDHF01025569    JAI26745.1    CH933807    EDW13584.1    GEBQ01020185    JAT19792.1    CH940671    EDW58192.1    KRF78172.1    KRF78173.1    CH902620    EDV32278.2    KPU73876.1    KPU73877.1    CAQQ02395036    CH954177    EDV58475.1    KQS70410.1    CM000157    EDW88759.1    KRJ98004.1    KRJ98005.1    KRJ98006.1    KQ435969    KOX67854.1    CCAG010018514    EZ422898    ADD19174.1    CH480818    EDW52371.1    CM000361    CM002910    EDX04474.1    KMY89430.1    AE014134    AY089691    AAF52876.1    AAL90429.1    AY075442    ABF85762.1    GBHO01021645    GBHO01021643    GBHO01021642    GBRD01016721    GBRD01016719    GBRD01009209    GDHC01019892    GDHC01005207    JAG21959.1    JAG21961.1    JAG21962.1    JAG49106.1    JAP98736.1    JAQ13422.1    CH379059    EAL34235.2    CH479180    EDW28353.1    KQ434826    KZC07449.1    CH964282    KRG00236.1    JXJN01020904    JXJN01024195    DS235093    EEB11853.1    GBBI01002666    JAC16046.1    ACPB03018091    OUUW01000006    SPP81589.1    CVRI01000053    CRK99824.1    GECU01025502    JAS82204.1    GECL01000401    JAP05723.1    GBGD01001714    JAC87175.1    JH431152    GFJQ02007862    JAV99107.1    KQ775960    OAD52232.1    AAAB01001641    GFWV01002263    MAA26993.1   
Pfam
PF08740   BCS1_N        + More
PF00004   AAA
Interpro
IPR027243   BCS1        + More
IPR003959   ATPase_AAA_core       
IPR014851   BCS1_N       
IPR003960   ATPase_AAA_CS       
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       
SUPFAM
SSF52540   SSF52540       
PDB
5VHS     E-value=1.87138e-14,     Score=193

Ontologies

Topology

Length:
424
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.57972
Exp number, first 60 AAs:
18.30959
Total prob of N-in:
0.80790
POSSIBLE N-term signal
sequence
inside
1  -  12
TMhelix
13  -  32
outside
33  -  424
 
 

Population Genetic Test Statistics

Pi
269.428462
Theta
192.108807
Tajima's D
1.278545
CLR
0
CSRT
0.731613419329034
Interpretation
Uncertain
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