SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08940
Pre Gene Modal
BGIBMGA007725
Annotation
PREDICTED:_uncharacterized_protein_LOC105842004_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.394 PlasmaMembrane   Reliability : 1.846
 

Sequence

CDS
ATGATGGTGCCGCTGTGGGTAGTAGACGGAGCGGAGGAGGCAGGCGAGGAGGAGAGCAGACCACGGCGGGCGCCCGCAGAGCACGCGGTGCGGTGGCGTGCAAGGCACCTAGAGCGCGTCGGGCACCTGGACAGGCGGCGCGGCGGCGGCGTGGTGGGGCGCTGGGTGCGCGCCGCAGCCGCAGGACCCGGCCGGCCCCCCCTTCGGCTTAAACCTTGCCTCTCGGTCTGCCAGCTTGTCGAACAGCACTGCCCCTACTTTCTACCGGCAGATCGTGCGCCCGCATACCCCACGCAATACGCTGGCGAACCAACCTTCTTATGTCTCGATTCACGCATTCCCGAGACTGGGGCTCAGGCGAACAAGTCCAACTACGGAAGGGAGGATTGTTGTTATTGGTATTGCGCGTCGGGGTTATGTCACAAGTGCGAGCCGGGGCTGATCGAGGCGCCGCTGCCTCGTCCTGAGCAATGCGCGGCGGTTGAGGAGCGCGTCCCCACGTGCTCGGTGCCCTATCAAGCGCCCGCCGCGGCAGCCGCTGCAAGCTCCGCCGAATCCCTGTGCCCTCTCTTACTACTCCTCGCACTCGTGCTAATAGTTATTACGGCACAATATCGGACCCGTTGGACCGCCATCACGTTTCTAGTGAATATGTGCGTTTCGAAGTTATAG
Protein
MMVPLWVVDGAEEAGEEESRPRRAPAEHAVRWRARHLERVGHLDRRRGGGVVGRWVRAAAAGPGRPPLRLKPCLSVCQLVEQHCPYFLPADRAPAYPTQYAGEPTFLCLDSRIPETGAQANKSNYGREDCCYWYCASGLCHKCEPGLIEAPLPRPEQCAAVEERVPTCSVPYQAPAAAAAASSAESLCPLLLLLALVLIVITAQYRTRWTAITFLVNMCVSKL

Summary

Ontologies

Topology

Length:
223
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.61422
Exp number, first 60 AAs:
0
Total prob of N-in:
0.08930
outside
1  -  178
TMhelix
179  -  201
inside
202  -  223
 
 

Population Genetic Test Statistics

Pi
285.361513
Theta
196.11918
Tajima's D
1.432206
CLR
0.132403
CSRT
0.768311584420779
Interpretation
Uncertain
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