Gene

KWMTBOMO08935

Annotation

PREDICTED:_lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]

Location

Bomo_Chr15(+):8424374-8427944      View in EpiBrowser

Transcription factor

zf-LITAF-like

Location in the cell

Extracellular   Reliability : 1.523 PlasmaMembrane   Reliability : 1.529

CDS

ATGGATCTTCTACAAGTAGGCTCGGAGCCTGTAGGCATGAGGTGCCCTTATTGCCAAGAAGACATAATGACGAGGGCTATTTACAAAAATTCGACCATCACTCATATCGTTGCTGCAGTGCTGGGTGTATTGTTCTGGTGGCTGTGTTGCTGTATAATTCCGTATACAACGAAACGTTGGAAAAACGTGGAGCATAATTGTCCCAATTGTCATAAATTCCTGGGTGTCTATGAAAGAACGAGAGTGATTTAA

Protein

MDLLQVGSEPVGMRCPYCQEDIMTRAIYKNSTITHIVAAVLGVLFWWLCCCIIPYTTKRWKNVEHNCPNCHKFLGVYERTRVI

Uniprot

A0A1E1WBQ9   A0A194R6U3   A0A2H1W2L1   A0A2A4JR63   A0A437ATJ0   A0A2H1WAD5   + More
A0A2W1BNA3   A0A2B4RVD9   A0A3M6UJR4   A0A1B0BU36   A0A0K8UTC2   A0A2A4JVU8   A0A437BIX7   A0A3M6TLJ8   A0A2B4SN90   A0A336MY04   A0A194ANP1   A0A336MTF6   A0A0C2GNG4   S4P885   A0A2J7RKB4   A0A2I4CT57   A0A1S4FG64   Q172M2   A0A182G7S7   A0A2A4JW93   B4KP83   A9XBI8   A0A0S1TPH1   A0A212FFW2   B4QHK9   K1R4U6   G9FXD7   A0A437BJ34   B4I887   A0A1S4FG68   K1QAE1   A0A1J1ILL1   B4P5J4   D2KK68   A8DYM6   A0A3Q3MAI5   A0A3Q1G347   W5XM22   A0A0J9RK55   A0A0B1TWW6   A0A0B1THI0   A0A3P7JR87   A0A194PJC2   B3FMU5   A0A3B4AL09   A0A023EH32   A0A3Q3QD55   A0A182GCI1   Q172M1   A0A2W1BQA8   F1BZ88   A0A194RSS6   G1FET2   A0A3Q3EZX7   A0A3R7QXD1   K1QR64   B3NLH2   A0A3Q2PHE7   A0A3Q0KGK6   A0A1W4VQJ0   A0A1L8EIY1   A0A194R8G0   G4VQL6   A0A2H1WJ10   A0A1S3IHN4   A8CA04   K1RPA3   A0A182JDM5   A0A2W1BN81   A0A194PQ83   B0X8G2   W5XM11   A0A3Q2D6L8   A0A1S3IIP9   W2TR24   I4DPT9   A0A067RLV9   A0A182JK51   A0A1S3II01   A0A084VYA4   A0A1B0GQM0   A0A0M4EEI3   A0A182PVK6   A0A210QGT7   A0A1Q3FKN6   A0A182VL92   T1DFW1   A0A034WCJ7   A0A0C9QIY8   A0A182TGD0   A0A182KYN3   A7UV77   A0A182HZ06  

Pubmed

26354079    28756777    30382153    23622113    17510324    26483478    + More
17994087    17980621    22118469    22936249    22992520    22138218    17550304    21567197    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    18395262    25463417    24945155    21736897    22253936    17760985    22651552    24845553    24438588    28812685    24330624    25348373    20966253    12364791    14747013    17210077   

EMBL

GDQN01006626    GDQN01002211    GDQN01001780    JAT84428.1    JAT88843.1    JAT89274.1    + More
KQ460615    KPJ13538.1    ODYU01005917    SOQ47311.1    NWSH01000840    PCG73912.1    RSAL01000488    RVE41554.1    ODYU01007335    SOQ50013.1    KZ149983    PZC75751.1    LSMT01000314    PFX20520.1    RCHS01001413    RMX53618.1    JXJN01020464    JXJN01020465    GDHF01022493    JAI29821.1    NWSH01000518    PCG75906.1    RSAL01000049    RVE50382.1    RCHS01003379    RMX42283.1    LSMT01000049    PFX30533.1    UFQT01003106    SSX34585.1    GELH01000160    GELH01000159    JAS04112.1    UFQT01002583    SSX33712.1    KN729055    KIH62825.1    GAIX01006056    JAA86504.1    NEVH01002981    PNF41277.1    CH477434    EAT40986.1    JXUM01046825    JXUM01054329    KQ561816    KQ561492    KXJ77441.1    KXJ78397.1    PCG75904.1    CH933808    EDW09059.1    EF157939    EF157940    ABO70331.1    KT023069    ALM25911.1    AGBW02008757    OWR52625.1    CM000362    CM002911    EDX08238.1    KMY95840.1    JH817566    EKC36235.1    JN216844    AEX08893.1    RVE50383.1    CH480824    EDW56812.1    JH816790    EKC33607.1    CVRI01000055    CRL01127.1    CM000158    EDW91825.1    KRK00128.1    GU217721    ADA77533.1    AE013599    ABV53888.2    AHN56535.1    KF051277    AHI17306.1    KMY95839.1    KN549200    KHJ99985.1    KN550019    KHJ95272.1    UYYB01146756    VDM85886.1    KQ459606    KPI91185.1    EU249541    ACA96822.1    GAPW01005437    JAC08161.1    JXUM01054326    JXUM01054327    JXUM01054328    KXJ77440.1    EAT40987.1    PZC75755.1    HQ174259    ADX31291.1    KQ459700    KPJ20400.1    JN180640    AEK86526.1    QCYY01000928    ROT81727.1    EKC36233.1    CH954179    EDV54888.1    GFDG01000195    JAV18604.1    KPJ13540.1    HE601631    CCD82576.1    ODYU01008993    SOQ53063.1    EU035828    ABV44730.1    EKC36231.1    KZ150055    PZC74326.1    KQ459602    KPI93295.1    DS232488    EDS42498.1    KF110681    AHI17296.1    KI658196    ETN83482.1    AK403777    BAM19929.1    KK852598    KDR20553.1    ATLV01018349    KE525231    KFB42948.1    AJVK01017302    CP012524    ALC42502.1    NEDP02003747    OWF47962.1    GFDL01006896    JAV28149.1    GALA01000412    JAA94440.1    GAKP01006543    JAC52409.1    GBYB01003504    JAG73271.1    AAAB01008984    EDO63389.1    APCN01005837   

Proteomes

UP000053240    UP000218220    UP000283053    UP000225706    UP000275408    UP000092460    + More
UP000235965    UP000192220    UP000008820    UP000069940    UP000249989    UP000009192    UP000007151    UP000000304    UP000005408    UP000001292    UP000183832    UP000002282    UP000000803    UP000261640    UP000257200    UP000053268    UP000261520    UP000261600    UP000261660    UP000283509    UP000008711    UP000265000    UP000008854    UP000192221    UP000085678    UP000075880    UP000002320    UP000265020    UP000027135    UP000030765    UP000092462    UP000092553    UP000075885    UP000242188    UP000075903    UP000075902    UP000075882    UP000007062    UP000075840   

Pfam

PF10601   zf-LITAF-like

Interpro

IPR037519   LITAF_fam        + More
IPR006629   LITAF       

ProteinModelPortal

A0A1E1WBQ9   A0A194R6U3   A0A2H1W2L1   A0A2A4JR63   A0A437ATJ0   A0A2H1WAD5   + More
A0A2W1BNA3   A0A2B4RVD9   A0A3M6UJR4   A0A1B0BU36   A0A0K8UTC2   A0A2A4JVU8   A0A437BIX7   A0A3M6TLJ8   A0A2B4SN90   A0A336MY04   A0A194ANP1   A0A336MTF6   A0A0C2GNG4   S4P885   A0A2J7RKB4   A0A2I4CT57   A0A1S4FG64   Q172M2   A0A182G7S7   A0A2A4JW93   B4KP83   A9XBI8   A0A0S1TPH1   A0A212FFW2   B4QHK9   K1R4U6   G9FXD7   A0A437BJ34   B4I887   A0A1S4FG68   K1QAE1   A0A1J1ILL1   B4P5J4   D2KK68   A8DYM6   A0A3Q3MAI5   A0A3Q1G347   W5XM22   A0A0J9RK55   A0A0B1TWW6   A0A0B1THI0   A0A3P7JR87   A0A194PJC2   B3FMU5   A0A3B4AL09   A0A023EH32   A0A3Q3QD55   A0A182GCI1   Q172M1   A0A2W1BQA8   F1BZ88   A0A194RSS6   G1FET2   A0A3Q3EZX7   A0A3R7QXD1   K1QR64   B3NLH2   A0A3Q2PHE7   A0A3Q0KGK6   A0A1W4VQJ0   A0A1L8EIY1   A0A194R8G0   G4VQL6   A0A2H1WJ10   A0A1S3IHN4   A8CA04   K1RPA3   A0A182JDM5   A0A2W1BN81   A0A194PQ83   B0X8G2   W5XM11   A0A3Q2D6L8   A0A1S3IIP9   W2TR24   I4DPT9   A0A067RLV9   A0A182JK51   A0A1S3II01   A0A084VYA4   A0A1B0GQM0   A0A0M4EEI3   A0A182PVK6   A0A210QGT7   A0A1Q3FKN6   A0A182VL92   T1DFW1   A0A034WCJ7   A0A0C9QIY8   A0A182TGD0   A0A182KYN3   A7UV77   A0A182HZ06  

KEGG

101745140    K19363 lipopolysaccharide-induced tumor necrosis factor-alpha factor | (RefSeq) lipopolysaccharide-i

PATHWAY

04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0016021   GO:0009631  

PANTHER

PTHR23292  

Length:

83

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

22.29921

Exp number, first 60 AAs:

22.2992

Total prob of N-in:

0.02845

POSSIBLE N-term signal

sequence

outside

1  -  32

TMhelix

33  -  55

inside

56  -  83

 

 

Pi

210.417013

Theta

153.438365

Tajima's D

1.280749

CLR

0

CSRT

0.739763011849408

Interpretation

Uncertain