Gene

KWMTBOMO08924

Pre Gene Modal

BGIBMGA007812

Annotation

PREDICTED:_regulating_synaptic_membrane_exocytosis_protein_2_isoform_X5_[Bombyx_mori]

Location

Bomo_Chr15(-):8261398-8271873      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.717

CDS

ATGCCGGTATCATCTCGAACAATTCCTCAGAGCACTCCGGTACAAAATACAGAGGGAACCGAAGTCCCTCCGCAGACCCAGAGGTTTCAAACGATCCGTAAGAATGGGATTATCGACAATCCGAACGGCCCTCCTCTGTATGGAGTCAAATGGAAGAAGCTCGTATTTGGAAGCCCCGGCCCAGAGATGGGAGCAGTACTCCACGCGAGGCCGGACTTGTGCTTTATAAAGCAAAAGTCTTTGTTCAGGCGTGAAGTACCGCTTCGCTCTGTTGAGGACTCCCAGCATTTTGGACGCCAACTTGGCTTTGCCTTCCAAATGACTCAGAAACTGGACATCGCTCGAAATGTCGACCCCAAGTATCCCGATACTCTCGGAAGGTTGCAGGGATACTTCTTGGAATTGCGGCGCCATGACAAAGGGGTCCTTCTTCGCAGATGGGAGCGACATTATGCGGGTTTATCTGATTCGGAGCTTGCTGCCCGCAGTGGCGGTAGTTGGGCTCCACGGAGAAGGCTATCTCCTGATGCAACAGCAGCAGATTCCGACCTAGAATCGGTCGCTTCTGTAACATCAAGCGCCTTCAGCACACAATCCGAACGACCTCGACCGACACGTATGCTTAGCAACGATTATGGTGGAAGGGACAACGGAAGGAACAATAATCAGCCACAGCCGTTGGAGAGACGCGAGTCTCGCCGAGGCCAATTCACTCGGAGTTTGAGCAACGCAGATGTGCCGCCTGATGAAAAAACAGATGGCAGTCTAAGTGACACTGCGTTGGGTGGTACCGGCGAGCTGGAGCCAAGCACTGATGATGTCCTCTTAAAAGCTGAGCCTCGGGATTATTTCGGGCCGGGCATGGGCAAGAAAAGCAACTCTACCTCACAATTGTCAGCCACAGGACGAAAACGAAGGTTAGGTTTTGGTAAACGTGGCAAAAATTCGTTTACGGTGCAACGCAGTGAGGAAGTGGTACCCGGCGAAATGAGAGGAGGCACCGGCGTGTCGCGGGCCTCCTCCGCATCCAGTGAGAACGACGAAGACAGGTGGTCCCCGGGCATGCGAGGTTCTGGTTCTTCAGAAGGCGGAGGGCTATCGGACTTCATTGACGGCCTGGGTCCCGGACAGCTGGTCGGGAGACAATTACTAGGGGCGACTACGCTTGGAGATGTCCAACTTTCAATGTGCTACCAAAAAGGATTCTTAGAGGTGGAAGTCATACGTGCTCGCGGCTTACAAGCCAGGCAAGGAAGCCGAACCCTTCCAGCGCCATACGTCAAGGTCTATCTCGTGAGCGGAAAGCGATGTATAGCCAAAGCAAAGACAACAACCGCACGACGTACGCTCGACCCTCTCTACCAGCAAACGCTAACGTTTCGAGAAAACTTCAAAGGATGTGTACTGCAGGTTACTGTTTGGGGTGACTACGGTCGCATCGAGGGGAAAAAAGTATTTATGGGCGTGGCCCAAATAATGCTGGACGACATAAACCTCTCTAATATCGTTATTGGATGGTACAAACTATTTGGAACTACTTCTTTGTAA

Protein

MPVSSRTIPQSTPVQNTEGTEVPPQTQRFQTIRKNGIIDNPNGPPLYGVKWKKLVFGSPGPEMGAVLHARPDLCFIKQKSLFRREVPLRSVEDSQHFGRQLGFAFQMTQKLDIARNVDPKYPDTLGRLQGYFLELRRHDKGVLLRRWERHYAGLSDSELAARSGGSWAPRRRLSPDATAADSDLESVASVTSSAFSTQSERPRPTRMLSNDYGGRDNGRNNNQPQPLERRESRRGQFTRSLSNADVPPDEKTDGSLSDTALGGTGELEPSTDDVLLKAEPRDYFGPGMGKKSNSTSQLSATGRKRRLGFGKRGKNSFTVQRSEEVVPGEMRGGTGVSRASSASSENDEDRWSPGMRGSGSSEGGGLSDFIDGLGPGQLVGRQLLGATTLGDVQLSMCYQKGFLEVEVIRARGLQARQGSRTLPAPYVKVYLVSGKRCIAKAKTTTARRTLDPLYQQTLTFRENFKGCVLQVTVWGDYGRIEGKKVFMGVAQIMLDDINLSNIVIGWYKLFGTTSL

Uniprot

A0A437BIY2   A0A2J7QL53   A0A2J7QL47   A0A1Y1N8Q6   A0A1Y1N9T5   A0A1J1J266   + More
A0A1B6CKH8   A0A1B6CLW7   A0A1W4WTF2   A0A1Y1N6A6   D6WLW5   A0A1Y1N537   A0A2J7QL51   A0A0A9Y1U9   E0VWR1   T1H9W1   A0A336LKE1   A0A336LP26   A0A0A9VVP2   A0A146KXX4   A0A0A9Y4V6   A0A0A9VVP8   A0A0A9W1H3   A0A0A9VYQ8   V9IBN9   A0A0Q9WS98   A0A0Q9WR78   A0A0Q9WQ16   U4U462   A0A0A9XZA4   A0A146M6M7   A0A0A9W1G8   A0A0A9W622   A0A0A9W627   A0A0A9VXD4   A0A0A9VXC8   A0A0Q9WXZ7   A0A0Q9WX46   A0A0Q9X9N8   A0A0Q9X7V4   F4W8W8   A0A0B4K677   A0A0R1E3F8   A0A0B4K7E1   Q9VEE5   A0A1W4UJA5   A0A0R3NQU1   A0A0R3NPH2  

Pubmed

28004739    18362917    19820115    25401762    20566863    26823975    + More
17994087    23537049    21719571    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    26109357    26109356    15632085   

EMBL

RSAL01000049    RVE50400.1    NEVH01013250    PNF29315.1    PNF29314.1    GEZM01012342    + More
JAV92985.1    GEZM01012341    JAV92986.1    CVRI01000066    CRL06042.1    GEDC01023410    JAS13888.1    GEDC01022876    JAS14422.1    GEZM01012339    JAV92988.1    KQ971343    EFA04175.2    GEZM01012344    JAV92983.1    PNF29313.1    GBHO01017480    JAG26124.1    DS235823    EEB17817.1    ACPB03014673    ACPB03014674    ACPB03014675    UFQT01000038    SSX18426.1    SSX18423.1    GBHO01043297    JAG00307.1    GDHC01017336    JAQ01293.1    GBHO01017481    JAG26123.1    GBHO01043292    JAG00312.1    GBHO01043291    JAG00313.1    GBHO01043293    JAG00311.1    JR039064    AEY58515.1    CH940650    KRF83109.1    KRF83115.1    KRF83119.1    KB632094    ERL88699.1    GBHO01017482    JAG26122.1    GDHC01004202    JAQ14427.1    GBHO01043296    JAG00308.1    GBHO01043294    JAG00310.1    GBHO01043289    JAG00315.1    GBHO01043290    JAG00314.1    GBHO01043295    JAG00309.1    CH933806    KRG00613.1    KRG00614.1    KRG00611.1    KRG00631.1    GL887973    EGI69360.1    AE014297    AFH06482.2    CM000160    KRK02755.1    AFH06479.2    AFH06484.2    AAF55479.5    CM000070    KRT01296.1    KRT01295.1   

Proteomes

UP000283053    UP000235965    UP000183832    UP000192223    UP000007266    UP000009046    + More
UP000015103    UP000008792    UP000030742    UP000009192    UP000007755    UP000000803    UP000002282    UP000192221    UP000001819   

PRIDE

Q9VEE5   

Pfam

PF17820   PDZ_6        + More
PF00168   C2
PF02318   FYVE_2

Interpro

IPR039032   Rim-like        + More
IPR041282   FYVE_2       
IPR000008   C2_dom       
IPR041489   PDZ_6       
IPR010911   Rab_BD       
IPR001478   PDZ       
IPR036034   PDZ_sf       
IPR035892   C2_domain_sf       
IPR017455   Znf_FYVE-rel       
IPR013083   Znf_RING/FYVE/PHD       
IPR011011   Znf_FYVE_PHD       

SUPFAM

SSF57903   SSF57903        + More
SSF50156   SSF50156       

Gene 3D

2.60.40.150     3.30.40.10    

ProteinModelPortal

A0A437BIY2   A0A2J7QL53   A0A2J7QL47   A0A1Y1N8Q6   A0A1Y1N9T5   A0A1J1J266   + More
A0A1B6CKH8   A0A1B6CLW7   A0A1W4WTF2   A0A1Y1N6A6   D6WLW5   A0A1Y1N537   A0A2J7QL51   A0A0A9Y1U9   E0VWR1   T1H9W1   A0A336LKE1   A0A336LP26   A0A0A9VVP2   A0A146KXX4   A0A0A9Y4V6   A0A0A9VVP8   A0A0A9W1H3   A0A0A9VYQ8   V9IBN9   A0A0Q9WS98   A0A0Q9WR78   A0A0Q9WQ16   U4U462   A0A0A9XZA4   A0A146M6M7   A0A0A9W1G8   A0A0A9W622   A0A0A9W627   A0A0A9VXD4   A0A0A9VXC8   A0A0Q9WXZ7   A0A0Q9WX46   A0A0Q9X9N8   A0A0Q9X7V4   F4W8W8   A0A0B4K677   A0A0R1E3F8   A0A0B4K7E1   Q9VEE5   A0A1W4UJA5   A0A0R3NQU1   A0A0R3NPH2  

PDB

2Q3X     E-value=4.82466e-36,     Score=380

KEGG

101745430    K15297 regulating synaptic membrane exocytosis protein 2 | (RefSeq) regulating synaptic membrane exo

GO

GO:0006887   GO:0017137   GO:0016020   GO:0046872   GO:0005623   GO:0006886   GO:0016021   GO:0042391   GO:0098831   GO:0048788   GO:0050806   GO:0044325   GO:0045202   GO:2000300   GO:0042734   GO:0048167   GO:0048791   GO:0008021   GO:0048786   GO:0007274   GO:0016192   GO:0070073   GO:0016079   GO:0007269   GO:0017156   GO:0005515   GO:0007264   GO:0008270   GO:0016813   GO:0016817   GO:0043565   GO:0016876   GO:0043039  

PANTHER

PTHR12157  

Length:

515

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16446

Exp number, first 60 AAs:

7e-05

Total prob of N-in:

0.00186

outside

1  -  515

 

 

Pi

254.356122

Theta

212.367965

Tajima's D

0.584529

CLR

0.048505

CSRT

0.542822858857057

Interpretation

Uncertain