Silkworm Genome Informatics Database

Gene

KWMTBOMO08906

Annotation

PREDICTED:_guanine_nucleotide-releasing_factor_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr15(+):7756914-7782727 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.253

CDS

ATGGTGTTCGAGGATCGTCACGTCATTTCGGATCCTCCCGATCCACTAACGGTGCTTTTAGAGGGTGAAACCACTGGCGATCCAGGTTCAGGGCATCGTGGATCTCTGCGCGGTGCCAACAAGTTGGCGAGGCGAGCGCGATCCTTCAAAGACGATCTCCTCGAGCGTATTTCGAATATGCGTTCACCGGCTCAGCAGCACCATCAACCGCATCTTTCATCTGCTGTTCGTTCCCATTCACCCCTCAGTCCGAAGCTTCGAAATATGGGGGCGAAATCTAATACAGCCGAGGAGGGGGAAGTCACGCCCGCCAAAGAGTTGGAACGGCTCGTCAAAGAGGTAACATTCGGCTTGAAACACTTCTCGGACGTGATAACAAAGAGGAAATTGGAAATGCTTCCTGACAATGGCACGATCGTGTTCGAATCCATTGCGAACATACATAAAGCAATAAAACCGTACTGCAGTAGGTCGCCTCCTCTCACGAGCGCCGTTAAACGTCTTTGTGCGGCTCTCGCAAAGTTGATACGTCTGTGCGACGAAATCACCGCGGTCAGCTTACGCTCGGACGCCAGCAACGAGGAATTAGATACGTCGGTCGCAGCCCTGTCGCCCGATCACGTCAGTTCGATTGTTAAAGGCGTGACTTCCGCCGTGGAAGAAGTCGCCGCGTTAGCCCAACAGCACATGACGCGACCGGCGCTGTCGCCCCGACCGGCCCTCGTGTCGCCCAGATCCTCTACACAAAGAAATTCATTGCCAGATATACCATTAACACCCAAAGAACGTTCACTATTGACAGGTGAACCCGGCAATGAGGCAGGCGGCGTGCGCGCCTCCCATTCCTCGGAGTCGGTTCTGGACGCGCCCGACACGCCGCCCCCCAAACCTGCGAGACCCAATCGGAAAATCGAGTTCGCCCCACCTCTGCCGCCTAAGCGCAAGTCTAACAACGACAGCTCCCTACTGGGCTTGTCTATTGATAGGTTGTCTCTGCAGTCACACAGCAGCGGGTCCCTGGATTCTATGTTGAATATTTCGAACGACGAGGATAGGAACCACCATGACTCATCTAACCACGATAATGTTTTCATTTCGCAACAAAATAACGACGTTTCTGGGCTGTGTAGCTGCAGCAACGGAAATGACGTACGTACCTCAATGGAGTCACATGAATCACATCTGAACTCTGCTCACTTGAACTCGAACCATAATCGTTTCTCAAACGAGTCTGGATTCGTTTCTGTGGGACACGCTGAGATATCAACAGAGCACAGTTTCACGTCTTCATTCTCTTCGCATCATTACTCCAGCCATACGGATAGTACTTTTAACAGTACAGACTGTGTGAGCGAAATGAGGTGCACAGTGCAAAGTTTTGAGAGCCGCATGAATGTAACAAACATGAACCAATGTATCACGCACCATTCCTCGCAACTGGCGAGCATTACTTCAGACGAGAGCGAGACTCCACCGGAGCTGCCCGCCAAGACGAGGCGCAACATTCGAGCCGACGTACAGCAACACTTCCCGAATGTCGAAATCAGATCGAACCCAGTATGTTCTCTGCACGGCGATGCCAGACCGCACACATTAGCTGATCACCATCCACCGAGGCCCCCACCATTGCCGCTAAAGAAAAAACACATAATGGCGTACATGGAAATGTTCGGTAACTGTAGTCACCCGCCGAACAACGCGGCCGCACCGCCCGATATGTTCCGACATTCCATACACACGTACAATTTGGCCAGTTCTCAACACACAAGTGCAGGTGTGATTAGCGTTCAGAGACAACAAGTTCAAAGGTCTATAGCTCAATCGTTTACAGTACAACACTTTGGGAATCCGCCCTTGAGTGGGTCTGACGACAGTGTCAGCTTAACATCGAGCGGCACCAGTCCTTTACCTCTAGAACCGCCACCGGCTTTGCCGCCCAAGATGAATAAAAAACAGGTTCAAATGAATTCGAGCAACGAATTATTGCCTCCGCCGTCGCCGCGACCATCCTCCCACAATAGTTCGGCAGATGAAAGTCATTTAAATAATATTCAGTCCGATGAATCATTTATTAACATCACAACGCCTGGTAAATTCCCACTGGAATATGAGTTTGAGAATCTCTTGGAGACGTCGGCGCCGTCTCCTGCTCCGTCACAGAAAAGTGAAGAAGTTGTAGAGCCATCCCCTGTCGAAAAAGAAAAGCCCGCAACACCGACCCCACCTGACCCCGACGACATCGTGCTGCAGACCGACATCAACAAGTGGCTCGTACTGAAAGGTTCCAACAAGGATGGACCCGAAATACGCGGAGGTCACCCTGACGCTCTCATAGTGCTCGCGACTAAAGGAACCAAAGACTTCGCGTACCAGGAAGCGTTCCTGGCGACGTACCGCACGTGGGTGTCGCCGAGCGGGCTGGTGGCGCGGCTCGTGCGGCGCGCGCACCACCTGCGGGCGCGCCCCCACGACCTGCGCTCCACGCTCAGCCTGCTCACCAGGGTCGTCGCCGACCTCACGATGCTAGATTTGGATTACCCGTTAATGCAAGAGATAATGGAGTTCATCTACTGGTTGATTTACGAAGCCGAAGAGCTCGCAATAGCGAAAGCGCTGAGACAAATTCTAGTCGATAAACAGAAACAGTTGCATTTCCAACAAACAAACAATAGATACGAATACGACACGCCGTGCTACGGAACAGTGTCGCTTCGTCGCGATACGTTGTTGGATTTCAAAGCCACGGAAATAGCCGAACAGATGACGCTCTTGGACGCGGCGTTGTTTATCCGCATCACCACGGCCGAGGTGCTGTCGTGGCCTCGCGAGCAGTCCGAAGAGAGCTCACCCAATCTCACCCGATTCACGGAACACTTCAACAAGATGAGTTATTGGGCGCGGTCGAGGATCTTGGAACAGGAAAAGGCAATAGAACGTGAGAAATACGCCAGTAAATTCCTGAAAGTGATGAAGGCGTTACGCAAGATGAACAATTTCAATTCGTACCTGGCTCTGGTGTCCGCTTTGGACTCTCCGCCGGTGCGACGTCTCGGTTGGCCTCGATACATCGTCGACACTCTGCACGACTACTGCACCATCATAGACTCCTCGTCGTCTTTCCGCACCTACAGGCAAGCTTTAGCCGAGACGCAGCCGCCGTGTATACCGTACATCGGTCTCGTCTTGCAAGATTTAACTTTTGTCCATATTGGAAATCAAGATCTGTTATCGGATGGAAGTATTAATTTCACGAAGAGGTGGCAGCAGTATCACATCATGGAGAATATGAAGAGATTCCACAAAGACAGGCAGTACAAGTTCAAGAAGAACGAGCGCATCCAAGCCATGTTCAATGATTTCGACGACGTGCTGAGCGAGGAGGCGATGTGGCAGGTCTCCGAGAGCATCAAGCCGCGCGGCGGGAAGACTAAGCCGACCTCCGCCATTTGA

Protein

MVFEDRHVISDPPDPLTVLLEGETTGDPGSGHRGSLRGANKLARRARSFKDDLLERISNMRSPAQQHHQPHLSSAVRSHSPLSPKLRNMGAKSNTAEEGEVTPAKELERLVKEVTFGLKHFSDVITKRKLEMLPDNGTIVFESIANIHKAIKPYCSRSPPLTSAVKRLCAALAKLIRLCDEITAVSLRSDASNEELDTSVAALSPDHVSSIVKGVTSAVEEVAALAQQHMTRPALSPRPALVSPRSSTQRNSLPDIPLTPKERSLLTGEPGNEAGGVRASHSSESVLDAPDTPPPKPARPNRKIEFAPPLPPKRKSNNDSSLLGLSIDRLSLQSHSSGSLDSMLNISNDEDRNHHDSSNHDNVFISQQNNDVSGLCSCSNGNDVRTSMESHESHLNSAHLNSNHNRFSNESGFVSVGHAEISTEHSFTSSFSSHHYSSHTDSTFNSTDCVSEMRCTVQSFESRMNVTNMNQCITHHSSQLASITSDESETPPELPAKTRRNIRADVQQHFPNVEIRSNPVCSLHGDARPHTLADHHPPRPPPLPLKKKHIMAYMEMFGNCSHPPNNAAAPPDMFRHSIHTYNLASSQHTSAGVISVQRQQVQRSIAQSFTVQHFGNPPLSGSDDSVSLTSSGTSPLPLEPPPALPPKMNKKQVQMNSSNELLPPPSPRPSSHNSSADESHLNNIQSDESFINITTPGKFPLEYEFENLLETSAPSPAPSQKSEEVVEPSPVEKEKPATPTPPDPDDIVLQTDINKWLVLKGSNKDGPEIRGGHPDALIVLATKGTKDFAYQEAFLATYRTWVSPSGLVARLVRRAHHLRARPHDLRSTLSLLTRVVADLTMLDLDYPLMQEIMEFIYWLIYEAEELAIAKALRQILVDKQKQLHFQQTNNRYEYDTPCYGTVSLRRDTLLDFKATEIAEQMTLLDAALFIRITTAEVLSWPREQSEESSPNLTRFTEHFNKMSYWARSRILEQEKAIEREKYASKFLKVMKALRKMNNFNSYLALVSALDSPPVRRLGWPRYIVDTLHDYCTIIDSSSSFRTYRQALAETQPPCIPYIGLVLQDLTFVHIGNQDLLSDGSINFTKRWQQYHIMENMKRFHKDRQYKFKKNERIQAMFNDFDDVLSEEAMWQVSESIKPRGGKTKPTSAI

Uniprot

A0A194PKK0 A0A212F3Y3 A0A2H1WX84 A0A0N1IGL6 A0A437AUH4

Pubmed

26354079 22118469

EMBL

KQ459602 KPI93259.1 AGBW02010474 OWR48441.1 ODYU01011338 SOQ57024.1 + More
KQ459937 KPJ19218.1 RSAL01000401 RVE41918.1

Proteomes

UP000053268 UP000007151 UP000053240 UP000283053

Pfam

PF00617 RasGEF

Interpro

IPR000651   Ras-like_Gua-exchang_fac_N        + More
IPR019804   Ras_G-nucl-exch_fac_CS
IPR001895   RASGEF_cat_dom
IPR023578   Ras_GEF_dom_sf
IPR008937   Ras-like_GEF
IPR036964   RASGEF_cat_dom_sf

SUPFAM

SSF48366 SSF48366

Gene 3D

1.10.840.10

CDD

cd00155 RasGEF

ProteinModelPortal

A0A194PKK0 A0A212F3Y3 A0A2H1WX84 A0A0N1IGL6 A0A437AUH4

PDB

2IJE E-value=5.74024e-25, Score=288

KEGG

101746299 K06277 Rap guanine nucleotide exchange factor 1 | (RefSeq) guanine nucleotide-releasing factor 2

GO

GO:0005085 GO:0007264 GO:0005524 GO:0003723 GO:0016020 GO:0016817 GO:0008270 GO:0043565 GO:0016876 GO:0043039

PANTHER

PTHR23113

Length:

1149

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00237

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1149

Pi

270.428775

Theta

23.03021

Tajima's D

0.436416

CLR

0.63615

CSRT

0.498425078746063

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics