SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08899
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 3.769
 

Sequence

CDS
ATGCTCACCATAATATCGTACTTGTCGATATTGAGTAATGCGGTATTAATGGCGTGGTCTTCACGATTTATAAAAAGACGTTTTTATCTCAGTAACAATAATACTATGGATAATTTTTTTGCGTTTACCACAACAAGATTTGTTTCACAGGATTTCTTGAAGTTGAGTACGATGTCAAAATCCTTTAAAGCCTACAAAGGATTCATTCCCAACGATTGCTACTATCCCGGTGTGATGTTGTATCTACCTGAATATAAGGTGCAGTTTCCAAATTTTAACATCTTTTACTTTTATCCTAATTATGTTCCTTTACCGGAGCATTACCAAATAAAAACTCAGGAGAATAGTTCACTAATAATTTATGAGTATGTCGGGTTGATGGTTGTCTTATTAGCTCAATATTTAATCTCTGGTACATCGAAAGACGTTGAGGACACTATAAAAATAGAACGGAAACTGAAAGAAGCTTATATCACATACACAGGATAA
Protein
MLTIISYLSILSNAVLMAWSSRFIKRRFYLSNNNTMDNFFAFTTTRFVSQDFLKLSTMSKSFKAYKGFIPNDCYYPGVMLYLPEYKVQFPNFNIFYFYPNYVPLPEHYQIKTQENSSLIIYEYVGLMVVLLAQYLISGTSKDVEDTIKIERKLKEAYITYTG

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
162
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
37.90362
Exp number, first 60 AAs:
18.41117
Total prob of N-in:
0.07453
POSSIBLE N-term signal
sequence
outside
1  -  3
TMhelix
4  -  23
inside
24  -  116
TMhelix
117  -  136
outside
137  -  162
 
 

Population Genetic Test Statistics

Pi
372.526915
Theta
180.360335
Tajima's D
3.373567
CLR
0.422141
CSRT
0.992700364981751
Interpretation
Uncertain
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