SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08896
Annotation
NA
Location in the cell
PlasmaMembrane   Reliability : 3.608
 

Sequence

CDS
ATGTGTCCGAATTGTCGTGATTTTAACATATGTCCATTTACTAGAGTGACTGATCATTGCAAAGAAGTTACATTGGGCTTCATGAGAGAGCACTATCTATCATGGTTGTGGGAAAGTGACTGTGGTAGTACAAGTATATTAAGACCCGACCATAAAGCTAACTTCAAGACCATCAAGAGATCAAAAGTGACAGGAATATTGAAAAATTACGACAGTGTGTTTACAAAGATATTCAATATTATAAAATCTTTAGCTGTGGTTTTTGCGCTCCTTGCTGTAATTTTCCCGATGACTTTATACTGGGCCAATTTACAATTTCGGATCATACACAAAGTGAAAGCAGAAATTAAAGATCCTAATTATGCGCATTTTGCTGGTCTTGCAATATTTTCTTTGATCTACGTTTTCGTTAATGTGGTTTTTGAAAAGGTATGTACGTACAGGAATAAATAA
Protein
MCPNCRDFNICPFTRVTDHCKEVTLGFMREHYLSWLWESDCGSTSILRPDHKANFKTIKRSKVTGILKNYDSVFTKIFNIIKSLAVVFALLAVIFPMTLYWANLQFRIIHKVKAEIKDPNYAHFAGLAIFSLIYVFVNVVFEKVCTYRNK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
150
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
43.10494
Exp number, first 60 AAs:
0.00018
Total prob of N-in:
0.99535
inside
1  -  79
TMhelix
80  -  102
outside
103  -  121
TMhelix
122  -  141
inside
142  -  150
 
 

Population Genetic Test Statistics

Pi
139.954557
Theta
134.0015
Tajima's D
1.3894
CLR
0.29305
CSRT
0.75671216439178
Interpretation
Uncertain
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