Gene

KWMTBOMO08894  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007710

Annotation

ribosomal_protein_S5_[Bombyx_mori]

Location

Bomo_Chr15(+):7610130-7610942      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.212 Mitochondrial   Reliability : 1.364 Nuclear   Reliability : 1.249

CDS

ATGGCCGAGGAGAACTGGAATGACGACGTAGCCGAGGCAGGCAGCGTGGTTGTGGAAACCATGTCTTTACCACAAGCCGCCGACATTCCTGAAATCAAGCTTTTCGGCAGATGGAGTTGCTACGATGTGCAAGTCTCTGATATGTCTCTGCAGGACTACATTTCCGTTAAAGAGAAGTACGCAAAATATTTACCTCATTCAGCTGGCAGGTATGCACACAAGCGTTTCCGTAAAGCCCAGTGCCCAATCGTGGAGCGCCTTACAAACTCTCTAATGATGCACGGTCGGAACAATGGCAAAAAACTGATGGCCGTACGTATTGTCAAACATGCGTTTGAAATTATTCACTTGTTAACTGGAGAAAACCCTCTGCAAGTACTCGTGACTGCCATTATCAACTCTGGACCCCGTGAAGATTCGACTAGGATCGGTCGTGCGGGTACAGTTCGTCGTCAAGCCGTTGATGTTTCACCCTTGCGCCGAGTCAACCAAGCAATCTGGCTTTTGTGCACAGGTGCACGTGAGGCTGCATTCAGAAATATTAAAACAATCGCAGAGTGTGTTGCAGATGAATTAATTAATGCAGCTAAGGGTTCATCTAACTCCTACGCCATCAAAAAGAAGGACGAGCTGGAGCGTGTTGCTAAATCCAACCGTTAA

Protein

MAEENWNDDVAEAGSVVVETMSLPQAADIPEIKLFGRWSCYDVQVSDMSLQDYISVKEKYAKYLPHSAGRYAHKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAFEIIHLLTGENPLQVLVTAIINSGPREDSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECVADELINAAKGSSNSYAIKKKDELERVAKSNR

Similarity

Belongs to the universal ribosomal protein uS7 family.

Uniprot

Q5UAN9   Q4VM05   D1LYP0   G3LHK9   A0A3G1T1G3   A0A385AB20   + More
E7DZ28   A0A3G2STX0   A0A220K8K5   A0A2H1VL06   I4DMB0   I4DIJ4   A0A2A4K1R5   A0A385AB22   A0A385AB13   A0A0N0PE78   A0A385AB14   A0A385AB08   A0A385AB21   V9PT73   Q95V33   G0ZEE6   A0A385AB06   A0A385AB07   A0A385AB09   A0A385AB12   A0A385AB16   A0A385AB11   A0A0L7L810   A0A385AB15   A0A385AB03   V9PT63   V9PSU6   V9PT74   V9PSU4   A0A3G2STX2   V9PSV1   A0A411P0J8   A0A411P0G1   A0A411P0F8   A0A411P0K5   A0A411P0F4   V9PT79   A0A411P0G2   A0A411P0F2   A0A0A0QGG4   A0A3G2SU13   A0A3G2STX1   A0A3G2SU29   A0A3G2SU15   V9PTA8   A0A0A0QBL0   A0A411P0M3   B3TGC1   V9PTD4   V9PT89   A0A0A0QBL4   V9PTC5   A0A411P0G0   D4P6H8   A0A291LV77   C8C3F0   C8C3K5   C8C3M3   A0A0H4THE7   A0A1S6EP60   A0A1S6EP27   A0A1S6EP31   A0A1S6EP54   A0A1S6EP46   A0A1S6EP57   A0A1S6EP51   A0A1S6EP29   A0A1S6EP79   A0A1S6EP48   A0A1S6EP69   A0A1S6EP53   A0A1S6EP66   A0A1S6EP81   A0A1S6EP67   A0A1S6EP47   A0A1S6EP63   A0A1S6EP43   A0A1S6EP62   A0A1S6EP44   A0A1S6EP39   A0A1S6EP38   A0A1S6EP33   A0A1S6EP80   A0A1S6EP59   A0A1S6EP50   A0A1S6EP37   A0A1S6EP49   A0A1S6EP82   A0A1S6EP24   A0A1S6EP35   A0A1S6EP52   A0A1S6EP32   A0A1S6EP58   A0A1S6EP40  

Pubmed

19121390    15857766    21840855    30314187    28630352    22651552    + More
26354079    14668217    26227816    24779998    20123129    28119108   

EMBL

BABH01002718    AY769319    AAV34861.1    AY837869    AAX63830.1    GU084314    + More
ACY95347.1    JN383812    AEN04488.1    MG992381    AXY94819.1    MH592969    AXL66221.1    HQ424731    ADT80675.1    MH161407    AYO51281.1    MF319698    ASJ26412.1    ODYU01002957    SOQ41112.1    AK402428    BAM19050.1    AK401112    KQ459602    BAM17734.1    KPI93248.1    NWSH01000302    PCG77610.1    MH592972    AXL66224.1    MH592974    AXL66226.1    KQ459937    KPJ19202.1    MH592968    AXL66220.1    MH592976    AXL66228.1    MH592975    AXL66227.1    KC571155    AHB18328.1    AF429979    AAL26581.1    JF265024    AEL28855.1    MH592963    AXL66215.1    MH592967    AXL66219.1    MH592970    AXL66222.1    MH592965    AXL66217.1    MH592973    AXL66225.1    MH592962    AXL66214.1    JTDY01002339    KOB71633.1    MH592971    AXL66223.1    MH592964    AXL66216.1    KC571145    AHB18318.1    KC571152    AHB18325.1    KC571153    AHB18326.1    KC571147    AHB18320.1    MH161405    AYO51279.1    KC571167    AHB18340.1    MH822596    QBF57759.1    MH822600    QBF57763.1    MH822601    QBF57764.1    MH822595    QBF57758.1    MH822592    MH822594    QBF57755.1    KC571158    AHB18331.1    MH822598    QBF57761.1    MH822591    QBF57754.1    KF543012    AII82961.1    MH161408    AYO51282.1    MH161403    AYO51277.1    MH161406    AYO51280.1    MH161404    AYO51278.1    KC571154    AHB18327.1    KF543005    KF543006    KF543007    AII82954.1    AII82955.1    AII82956.1    MH822593    QBF57756.1    EU141393    ABX57217.1    KC571156    AHB18329.1    KC571170    AHB18343.1    KF543011    AII82960.1    KC571146    AHB18319.1    MH822602    QBF57765.1    GU580657    ADD52810.1    KX950317    ATI36902.1    GQ357549    ACV44105.1    GQ357604    ACV44160.1    GQ357622    GQ357623    GQ357624    ACV44178.1    KR138949    AKQ06541.1    KY501533    AQR59826.1    KY501493    AQR59786.1    KY501491    AQR59784.1    KY501511    AQR59804.1    KY501522    AQR59815.1    KY501519    AQR59812.1    KY501506    AQR59799.1    KY501502    AQR59795.1    KY501536    AQR59829.1    KY501507    AQR59800.1    KY501524    AQR59817.1    KY501500    AQR59793.1    KY501535    AQR59828.1    KY501534    AQR59827.1    KY501529    AQR59822.1    KY501509    AQR59802.1    KY501510    AQR59803.1    KY501513    AQR59806.1    KY501528    AQR59821.1    KY501515    AQR59808.1    KY501499    AQR59792.1    KY501512    AQR59805.1    KY501505    AQR59798.1    KY501530    AQR59823.1    KY501514    AQR59807.1    KY501523    AQR59816.1    KY501490    AQR59783.1    KY501504    AQR59797.1    KY501537    AQR59830.1    KY501492    AQR59785.1    KY501494    AQR59787.1    KY501518    AQR59811.1    KY501503    AQR59796.1    KY501517    AQR59810.1    KY501497    AQR59790.1   

Proteomes

UP000005204    UP000053268    UP000218220    UP000053240    UP000037510   

PRIDE

Q5UAN9    B3TGC1   

Pfam

PF00177   Ribosomal_S7

Interpro

IPR020606   Ribosomal_S7_CS        + More
IPR005716   Ribosomal_S5/S7_euk/arc       
IPR000235   Ribosomal_S5/S7       
IPR036823   Ribosomal_S7_dom_sf       
IPR023798   Ribosomal_S7_dom       

SUPFAM

SSF47973   SSF47973       

Gene 3D

1.10.455.10    

CDD

cd14867  uS7_Eukaryote

ProteinModelPortal

Q5UAN9   Q4VM05   D1LYP0   G3LHK9   A0A3G1T1G3   A0A385AB20   + More
E7DZ28   A0A3G2STX0   A0A220K8K5   A0A2H1VL06   I4DMB0   I4DIJ4   A0A2A4K1R5   A0A385AB22   A0A385AB13   A0A0N0PE78   A0A385AB14   A0A385AB08   A0A385AB21   V9PT73   Q95V33   G0ZEE6   A0A385AB06   A0A385AB07   A0A385AB09   A0A385AB12   A0A385AB16   A0A385AB11   A0A0L7L810   A0A385AB15   A0A385AB03   V9PT63   V9PSU6   V9PT74   V9PSU4   A0A3G2STX2   V9PSV1   A0A411P0J8   A0A411P0G1   A0A411P0F8   A0A411P0K5   A0A411P0F4   V9PT79   A0A411P0G2   A0A411P0F2   A0A0A0QGG4   A0A3G2SU13   A0A3G2STX1   A0A3G2SU29   A0A3G2SU15   V9PTA8   A0A0A0QBL0   A0A411P0M3   B3TGC1   V9PTD4   V9PT89   A0A0A0QBL4   V9PTC5   A0A411P0G0   D4P6H8   A0A291LV77   C8C3F0   C8C3K5   C8C3M3   A0A0H4THE7   A0A1S6EP60   A0A1S6EP27   A0A1S6EP31   A0A1S6EP54   A0A1S6EP46   A0A1S6EP57   A0A1S6EP51   A0A1S6EP29   A0A1S6EP79   A0A1S6EP48   A0A1S6EP69   A0A1S6EP53   A0A1S6EP66   A0A1S6EP81   A0A1S6EP67   A0A1S6EP47   A0A1S6EP63   A0A1S6EP43   A0A1S6EP62   A0A1S6EP44   A0A1S6EP39   A0A1S6EP38   A0A1S6EP33   A0A1S6EP80   A0A1S6EP59   A0A1S6EP50   A0A1S6EP37   A0A1S6EP49   A0A1S6EP82   A0A1S6EP24   A0A1S6EP35   A0A1S6EP52   A0A1S6EP32   A0A1S6EP58   A0A1S6EP40  

PDB

6MTE     E-value=1.25294e-98,     Score=915

KEGG

692715    K02989 small subunit ribosomal protein S5e | (RefSeq) RpS5; ribosomal protein S5

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0006412   GO:0003723   GO:0003735   GO:0015935   GO:0005840   GO:0016020   GO:0016817   GO:0008270   GO:0043565   GO:0016876   GO:0043039  

PANTHER

PTHR11205  

Length:

219

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0441

Exp number, first 60 AAs:

0.00092

Total prob of N-in:

0.15601

outside

1  -  219

 

 

Pi

309.774464

Theta

234.972095

Tajima's D

1.006366

CLR

0

CSRT

0.660066996650167

Interpretation

Uncertain