SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08892  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007709
Annotation
PREDICTED:_mitochondrial-processing_peptidase_subunit_alpha_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.41
 

Sequence

CDS
ATGTCACATGTAACCGATGTGAAATTTCTTGTTACTAGGTTATTTTCATTGAAAAATAGCTTCCAAGCACCAAAGTGGAACATTAGAAAATTCAGTCAAGATGGAGATAAGTTATCACAGATTAAGGGCAGTGTTACACCATTACCTCCACTCTCAGAAGCTATGCTTAATCTACCTCCGGTCAAATATTCTCTGGCTAAATCTGAAGAGACCATCACTGAAGTCACAACTCTTAGTAATGGCTTAAGAGTTGCTTCAGAGAAAAAATTTGGACAGTTCTGTACTGCTGGTGTTGTTATTGACTCTGGCCCTAGATATGAAGTGGCTTATCCCAATGGAATTTGTCATTTTCTCGAGAAACTAAGCTTTGGGGCAACCCATAAATTTGCAACACGCGATGTAATGCTTCGTGAATTGGAGCGTCACGGTGGTATATGTGATTGCCAAGGCTCACGTGACACAACAGTGTATGCTACTAGTGCAGATTCAAGAGGATTGGAAGCTGTTACTCAGGTTTTAGCAGAAGTAACATTAAGACCAATATTATCAGCTGATGAGATTGAAGCAGCTAGGCAGGCAGTGGCGTTTGAGTTGGAGACTCTCTCAATGAGACCCGAACAAGAAACTATTCTTATGGATATGATTCATTCGGCTGCATATAAAGGGAACACTTTAGGTCTACCAAAGATATGTCCACAAGAAAACGTGAACAAAATTGACAAAGGAATTATATTGAACTATCTAAAGAATCACTACACTCCAGACAGAATGGTTGTAGCTGCTGTTGGGGTGGATCACGAGCCCTTTGTTGAATTCGTACAGAAATATTTTGTTGATATCAAACCTACTTGGTATACAGATGGAGACGAATCGTTCGTTCCAAAAGTTGACAAATCTATTTCGCAATACACCGGTGGAATTGAGCAGGAAGAGTGCGAAATACCTTTGTACCCAGGATCGGATTTACCAGAACTATCACACATTGTAATTGGATTAGAAAGTTGTTCTCATGGTGACCCAGATTTCGTTGCAACATGCGTTTTGAATATGATGATGGGTGGTGGTGGATCGTTCTCGGCTGGTGGACCTGGTAAAGGAATGTACACACGACTCTACACGAATGTCTTGAATAGATACCACTGGATGTTCAACGCGACAGCCTACAACCACGCCTACGGCGATACAGGCTTGTTTTGTGTACATGCCGCTTCGCCTCCTAATCGCATATATGACACCACGCTCGTGATAGCGCGGGAACTAGCAAACATGGCCGGTAAAGTTGGCGAAATTGAACTCAGAAGAGCCAAAACACAACTTCAGTCGATGTTACTCATGAACTTAGAGGCCCGACCAGTTGTATTTGAAGATGTTGGAAGACAGGTTTTGGCTACAGGAAAAAGGAAACCTCCCTCATTTTTCATCAATGAAATCGATAAAATCACAGCTGACGACATTGTGAGAGTCGCACAACGAATGCTGAGCGGCAGACCCGCGGTAGCCGGTCGCGGAAAACTTGCACATCTTCCCACATTCGATGAAATACAATCAAATATGTCTCTGAACAAAAGGGATGCTCCACCGCAAGGACGAAGGCTCAATCTTTTCCGCGCCTAA
Protein
MSHVTDVKFLVTRLFSLKNSFQAPKWNIRKFSQDGDKLSQIKGSVTPLPPLSEAMLNLPPVKYSLAKSEETITEVTTLSNGLRVASEKKFGQFCTAGVVIDSGPRYEVAYPNGICHFLEKLSFGATHKFATRDVMLRELERHGGICDCQGSRDTTVYATSADSRGLEAVTQVLAEVTLRPILSADEIEAARQAVAFELETLSMRPEQETILMDMIHSAAYKGNTLGLPKICPQENVNKIDKGIILNYLKNHYTPDRMVVAAVGVDHEPFVEFVQKYFVDIKPTWYTDGDESFVPKVDKSISQYTGGIEQEECEIPLYPGSDLPELSHIVIGLESCSHGDPDFVATCVLNMMMGGGGSFSAGGPGKGMYTRLYTNVLNRYHWMFNATAYNHAYGDTGLFCVHAASPPNRIYDTTLVIARELANMAGKVGEIELRRAKTQLQSMLLMNLEARPVVFEDVGRQVLATGKRKPPSFFINEIDKITADDIVRVAQRMLSGRPAVAGRGKLAHLPTFDEIQSNMSLNKRDAPPQGRRLNLFRA

Summary

Similarity
Belongs to the peptidase M16 family.
EMBL
RSAL01000005    RVE54340.1    NWSH01000302    PCG77612.1    KQ459602    KPI93250.1    + More
ODYU01002957    SOQ41114.1    KQ459937    KPJ19204.1    UFQS01000115    UFQT01000115    SSW99915.1    SSX20295.1    GANO01002688    JAB57183.1    AXCN02000770    AXCM01002726    ATLV01014722    KE524984    KFB39416.1    GGFK01005599    MBW38920.1    AAAB01008964    GAMD01003112    JAA98478.1    EAA12324.3    GGFM01003364    MBW24115.1    APCN01002476    GGFJ01004024    MBW53165.1    GGFK01005970    MBW39291.1    ADMH02002020    ETN59954.1    GAKP01010188    GAKP01010187    GAKP01010185    JAC48767.1    CH477233    EAT46759.1    GDHF01033623    GDHF01032118    GDHF01024888    GDHF01016226    GDHF01015904    GDHF01007992    GDHF01003568    JAI18691.1    JAI20196.1    JAI27426.1    JAI36088.1    JAI36410.1    JAI44322.1    JAI48746.1    APGK01053465    APGK01053466    KB741223    ENN72399.1    GBXI01004396    GBXI01003453    GBXI01000377    JAD09896.1    JAD10839.1    JAD13915.1    CVRI01000004    CRK87270.1    GAMC01001726    JAC04830.1    NEVH01006733    PNF36735.1    GFDL01010531    JAV24514.1    GAPW01000834    JAC12764.1    AJVK01004044    AJVK01004045    CM002911    KMY92126.1    JXUM01043841    JXUM01043842    KQ561377    KXJ78796.1    CH480816    EDW46842.1    CP012524    ALC42744.1    CM000362    EDX06093.1    GFTR01006996    JAW09430.1    JRES01000105    KNC34081.1    GBGD01001115    JAC87774.1    CH902619    EDV37812.1    JXJN01020712    GFDF01001762    JAV12322.1    KQ981701    KYN37485.1    AJWK01017071    GDKW01002613    JAI53982.1    GECL01003355    JAP02769.1    CH916367    EDW01198.1    ACPB03008219    GAHY01002108    JAA75402.1    JXJN01025590    KQ976453    KYM85331.1    AE013599    AY058323    AY089536    AAF59168.1    AAL13552.1    AAL90274.2    DS235822    EEB17780.1    GBBI01001012    JAC17700.1    KK853380    KDR08018.1    GFDF01001763    JAV12321.1    KQ971379    EEZ97500.1    CM000157    EDW89258.1    ADTU01008609    KQ982708    KYQ51796.1    OUUW01000001    SPP75548.1    CCAG010015437    EZ422375    ADD18651.1    GBYB01003598    JAG73365.1    KA645696    AFP60325.1    KQ979480    KYN21271.1    NNAY01003579    OXU19162.1    GL442815    EFN62998.1    GECZ01003877    JAS65892.1    GEZM01061809    JAV70305.1    CH954177    EDV59611.1    GEBQ01002283    JAT37694.1    KQ977513    KYN02176.1    CH933808    EDW08144.1    KK107570    QOIP01000005    EZA48849.1    RLU22605.1    CM000071    EAL26048.1    CH479181    EDW32547.1    LBMM01005224    KMQ91698.1    PYGN01001050    PSN38074.1    CH963849    EDW74541.1    CAQQ02050861    CAQQ02050862    CAQQ02050863    CAQQ02050864    CAQQ02050865    GL767674    EFZ13195.1    GL452396    EFN77279.1    KZ288445    PBC25647.1   
Pfam
PF05193   Peptidase_M16_C        + More
PF00675   Peptidase_M16
Interpro
IPR011765   Pept_M16_N        + More
IPR007863   Peptidase_M16_C       
IPR011249   Metalloenz_LuxS/M16       
IPR037715   PMPCA       
IPR001431   Pept_M16_Zn_BS       
SUPFAM
SSF63411   SSF63411       
PDB
1HR9     E-value=1.29359e-69,     Score=670

Ontologies

Topology

Length:
537
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04005
Exp number, first 60 AAs:
0.00016
Total prob of N-in:
0.00144
outside
1  -  537
 
 

Population Genetic Test Statistics

Pi
199.459739
Theta
181.938567
Tajima's D
0.995673
CLR
0.662123
CSRT
0.660966951652417
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28556443 VGEIELR 100.00 1e-06
28556443 STGAGSGGMWR 100.00 1e-06
28556443 GSVTPLPPLSEAMLNLPPVK 100.00 3e-06
28467696 FGQDCNGDGVVNCYDYMAIHKK 100.00 6e-06
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