Gene

KWMTBOMO08890  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007825

Annotation

PREDICTED:_AP-3_complex_subunit_mu-1_[Amyelois_transitella]

Location

Bomo_Chr15(-):7569555-7574389      View in EpiBrowser

Location in the cell

Golgi   Reliability : 1.121 PlasmaMembrane   Reliability : 1.101

CDS

ATGATACACAGTTTATTTATAATAAATCCATCGGGCGACGTGTTTCTAGAGAAGCATTGGAGAAGTGTGATCCCTCGTTCAGTATGTGATTATTATTTGGAAGCACAGAGAGCATCACCTAATGATGTACCACCGGTGTTGGCTGCTCCACATCATTACCTCATATCAATTCATAGAGGAGGAGTTGCACTTGTTGCTGTCTGTAAGCAGGAAGTTGCCCCACTATTTGTTATAGAGTTCTTGCATAGAGTTGTTGATACTTTTCAGGACTACTTTTCAGATTGCACTGAGACAATAATTAAAGAAAATTATGTGGTGGTGTATGAATTATTGGATGAAATGTTAGATAATGGCTTCCCACTGGCCACGGAAAGTAATATATTGAAAGAATTGATTAAACCACCAAATATTTTAAGAACAATTGCCAATACTGTTACAGGAAAATCAAATGTATCCTCTACACTTCCGTCTGGACAGCTGTCAAATGTACCTTGGAGAAGGTCAGGTGTAAAGTATGCTAACAATGAAGCTTACTTTGATGTAGTTGAAGAAGTCGATGCAATTATTGACAAAAGTGGAGCTACCGTAAATGCAGAAATACAAGGCTATATTGATTGCTGTATAAAACTGAGCGGAATGCCAGATCTTACTCTCACTTTTGTAAATCCAAGATTGTTTGATGATGTTTCATTTCATCCGTGTGTGCGGTTTAAGCGTTGGGAGGCGGAACGTATTTTATCGTTCATACCGCCCGATGGTAACTTCCGGTTGATGTCGTACCATATAGGATCACAAAGCGTTGTGGCTATACCTATATACGTACGTCATAGCTTGACATTGAGGTCGAATGGGGATCAGGGACGATTAGACCTCACTGTTGGACCAAAGCAGACCATGGGGAGGACGTTAGAAAATGTTGCATTGGAGATTTGCATGCCGAAGTGTGTTCTAAACTGCTGTCTAACAGCGAATCAAGGGAAATATTCCTATGACCCGGTCAGCAAGATGCTGCTTTGGGATATAGGACGTATAGAACTACCCAAACTGCCTAATATTAAAGGGAGCGTGTCGGTGGTATCGGGAGCTGATACGACGGGCGCCAGTCCGAGCATCAACGTTCATTTCACGATTCCGCAATTGGCGGTCAGCGGTCTCAGAGTGAGCCGCCTGGACATGTACGGCGCCAAGTACAAGCCATTCAAAGGCGTCAAGTACGTCACGAAAGCGGGCAAGTTCCACGTCAGGATGTGA

Protein

MIHSLFIINPSGDVFLEKHWRSVIPRSVCDYYLEAQRASPNDVPPVLAAPHHYLISIHRGGVALVAVCKQEVAPLFVIEFLHRVVDTFQDYFSDCTETIIKENYVVVYELLDEMLDNGFPLATESNILKELIKPPNILRTIANTVTGKSNVSSTLPSGQLSNVPWRRSGVKYANNEAYFDVVEEVDAIIDKSGATVNAEIQGYIDCCIKLSGMPDLTLTFVNPRLFDDVSFHPCVRFKRWEAERILSFIPPDGNFRLMSYHIGSQSVVAIPIYVRHSLTLRSNGDQGRLDLTVGPKQTMGRTLENVALEICMPKCVLNCCLTANQGKYSYDPVSKMLLWDIGRIELPKLPNIKGSVSVVSGADTTGASPSINVHFTIPQLAVSGLRVSRLDMYGAKYKPFKGVKYVTKAGKFHVRM

Similarity

Belongs to the adaptor complexes medium subunit family.

Uniprot

H9JE78   A0A3S2LI51   A0A2H1W3L6   A0A2A4K0M3   A0A194PIV0   A0A0N1PJR3   + More
A0A1E1WKG0   A0A212FKU9   A0A1Y1LXZ9   D6X4J2   A0A1W4XGA9   N6SWJ6   A0A1L8DWE5   A0A1L8DVV8   W8BVN0   A0A2A3EB91   A0A088A2H6   U5EXH0   A0A0M5J2Y4   A0A0A1WQU2   A0A026WEC6   A0A034VAK3   A0A310SW74   B4JMT2   A0A0J7L0I5   A0A0K8VW77   A0A154NY20   A0A336MTI7   A0A3B0K3M6   B4NEG2   B4L566   Q29GY7   E2BA54   A0A1W4UW73   A0A1I8NYC1   B3MQ12   E9IFD1   B4M9W1   A0A0L0BU93   E2A3P5   A0A0T6B4N0   A0A1I8M1E4   B4IHI7   A0A151IJS6   A0A151JB39   F4WWC5   A0A195B073   A0A195FCM0   A0A158NKJ6   A0A151WRP9   O76928   B4Q159   A0A1A9XRV6   A0A1B0AP73   B3NXY4   A0A1A9ZE61   A0A1A9UUP0   A0A336LZ39   A0A1S4FTJ5   A0A2J7R1C3   A0A1B6K793   Q0IEC0   A0A0N1IT56   A0A1B6GN75   A0A182GZT4   A0A182IMQ8   A0A1B0FQM7   A0A182V0N7   A0A0A9WH95   A0A1B6KHT4   A0A224XD99   A0A023F5N5   A0A182HL04   A0A069DU23   A0A182XA25   A0A182PH03   A0A182UJQ2   A0A1B6CS50   A0A182QEN2   A0A336MWC8   A0A2M3Z9D8   A0A182FRS3   A0A2M4BPW4   A0A0V0G7J8   A0A2M4ANP9   Q7PXM8   A0A423SW68   A0A2M3Z934   W5JHX4   A0A182MJC8   A0A182YB98   A0A0P4VTB8   A0A182R514   A0A182VWD3   A0A182L9C4   J9JYV0   A0A1D2N4A9   A0A182N547   A0A336LZ45   A0A2H8U036  

Pubmed

19121390    26354079    22118469    28004739    18362917    19820115    + More
23537049    24495485    25830018    24508170    30249741    25348373    17994087    15632085    20798317    21282665    26108605    25315136    21719571    21347285    10375633    10589826    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    17510324    26483478    25401762    26823975    25474469    26334808    12364791    14747013    17210077    20920257    23761445    25244985    27129103    20966253    27289101   

EMBL

BABH01002723    RSAL01000005    RVE54342.1    ODYU01005980    SOQ47422.1    NWSH01000302    + More
PCG77609.1    KQ459602    KPI93247.1    KQ459937    KPJ19201.1    GDQN01003544    JAT87510.1    AGBW02007963    OWR54362.1    GEZM01044221    JAV78379.1    KQ971380    EEZ97259.1    APGK01053948    KB741239    KB632275    ENN72149.1    ERL91121.1    GFDF01003509    JAV10575.1    GFDF01003510    JAV10574.1    GAMC01009199    GAMC01009197    JAB97356.1    KZ288311    PBC28456.1    GANO01000955    JAB58916.1    CP012528    ALC48261.1    GBXI01012873    JAD01419.1    KK107249    QOIP01000013    EZA54455.1    RLU15512.1    GAKP01020157    JAC38795.1    KQ759843    OAD62593.1    CH916371    EDV92025.1    LBMM01001444    KMQ96307.1    GDHF01009176    JAI43138.1    KQ434772    KZC03918.1    UFQS01002419    UFQT01002419    SSX14001.1    SSX33420.1    OUUW01000016    SPP88804.1    CH964239    EDW82131.1    CH933811    EDW06325.1    CH379064    EAL31972.1    GL446664    EFN87463.1    CH902621    EDV44438.1    GL762838    EFZ20694.1    CH940655    EDW66020.1    JRES01001325    KNC23617.1    GL436457    EFN71937.1    LJIG01009955    KRT82045.1    CH480839    EDW49338.1    KQ977294    KYN03897.1    KQ979182    KYN22324.1    GL888406    EGI61467.1    KQ976692    KYM77878.1    KQ981693    KYN37789.1    ADTU01018869    KQ982805    KYQ50483.1    AF110233    AE014298    AY069388    AJ009657    AAF14249.1    AAF46231.1    AAL39533.1    AGB95147.1    CAA08768.1    CM000162    EDX02414.1    JXJN01001236    CH954180    EDV47435.1    UFQT01000325    SSX23255.1    NEVH01008208    PNF34639.1    GECU01000386    JAT07321.1    CH477764    EAT36491.1    KQ435881    KOX69821.1    GECZ01005884    JAS63885.1    JXUM01002161    CCAG010017999    GBHO01035782    GDHC01006737    JAG07822.1    JAQ11892.1    GEBQ01028957    JAT11020.1    GFTR01006011    JAW10415.1    GBBI01002235    JAC16477.1    APCN01000876    GBGD01001623    JAC87266.1    GEDC01021101    JAS16197.1    AXCN02001521    SSX14000.1    SSX33419.1    GGFM01004297    MBW25048.1    GGFJ01005820    MBW54961.1    GECL01002025    JAP04099.1    GGFK01009093    MBW42414.1    AAAB01008987    EAA00857.4    QCYY01002671    ROT68411.1    GGFM01004296    MBW25047.1    ADMH02001137    ETN63967.1    AXCM01004179    GDKW01000744    JAI55851.1    ABLF02025906    LJIJ01000256    ODM99765.1    SSX23254.1    GFXV01008130    MBW19935.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000053268    UP000053240    UP000007151    + More
UP000007266    UP000192223    UP000019118    UP000030742    UP000242457    UP000005203    UP000092553    UP000053097    UP000279307    UP000001070    UP000036403    UP000076502    UP000268350    UP000007798    UP000009192    UP000001819    UP000008237    UP000192221    UP000095300    UP000007801    UP000008792    UP000037069    UP000000311    UP000095301    UP000001292    UP000078542    UP000078492    UP000007755    UP000078540    UP000078541    UP000005205    UP000075809    UP000000803    UP000002282    UP000092443    UP000092460    UP000008711    UP000092445    UP000078200    UP000235965    UP000008820    UP000053105    UP000069940    UP000075880    UP000092444    UP000075903    UP000075840    UP000076407    UP000075885    UP000075902    UP000075886    UP000069272    UP000007062    UP000283509    UP000000673    UP000075883    UP000076408    UP000075900    UP000075920    UP000075882    UP000007819    UP000094527    UP000075884   

PRIDE

H9JE78    O76928   

Pfam

PF00928   Adap_comp_sub        + More
PF01217   Clat_adaptor_s

Interpro

IPR018240   Clathrin_mu_CS        + More
IPR001392   Clathrin_mu       
IPR011012   Longin-like_dom_sf       
IPR028565   MHD       
IPR036168   AP2_Mu_C_sf       
IPR022775   AP_mu_sigma_su       

SUPFAM

SSF49447   SSF49447        + More
SSF64356   SSF64356       

ProteinModelPortal

H9JE78   A0A3S2LI51   A0A2H1W3L6   A0A2A4K0M3   A0A194PIV0   A0A0N1PJR3   + More
A0A1E1WKG0   A0A212FKU9   A0A1Y1LXZ9   D6X4J2   A0A1W4XGA9   N6SWJ6   A0A1L8DWE5   A0A1L8DVV8   W8BVN0   A0A2A3EB91   A0A088A2H6   U5EXH0   A0A0M5J2Y4   A0A0A1WQU2   A0A026WEC6   A0A034VAK3   A0A310SW74   B4JMT2   A0A0J7L0I5   A0A0K8VW77   A0A154NY20   A0A336MTI7   A0A3B0K3M6   B4NEG2   B4L566   Q29GY7   E2BA54   A0A1W4UW73   A0A1I8NYC1   B3MQ12   E9IFD1   B4M9W1   A0A0L0BU93   E2A3P5   A0A0T6B4N0   A0A1I8M1E4   B4IHI7   A0A151IJS6   A0A151JB39   F4WWC5   A0A195B073   A0A195FCM0   A0A158NKJ6   A0A151WRP9   O76928   B4Q159   A0A1A9XRV6   A0A1B0AP73   B3NXY4   A0A1A9ZE61   A0A1A9UUP0   A0A336LZ39   A0A1S4FTJ5   A0A2J7R1C3   A0A1B6K793   Q0IEC0   A0A0N1IT56   A0A1B6GN75   A0A182GZT4   A0A182IMQ8   A0A1B0FQM7   A0A182V0N7   A0A0A9WH95   A0A1B6KHT4   A0A224XD99   A0A023F5N5   A0A182HL04   A0A069DU23   A0A182XA25   A0A182PH03   A0A182UJQ2   A0A1B6CS50   A0A182QEN2   A0A336MWC8   A0A2M3Z9D8   A0A182FRS3   A0A2M4BPW4   A0A0V0G7J8   A0A2M4ANP9   Q7PXM8   A0A423SW68   A0A2M3Z934   W5JHX4   A0A182MJC8   A0A182YB98   A0A0P4VTB8   A0A182R514   A0A182VWD3   A0A182L9C4   J9JYV0   A0A1D2N4A9   A0A182N547   A0A336LZ45   A0A2H8U036  

PDB

4IKN     E-value=8.96025e-106,     Score=980

KEGG

101740461    K12398 AP-3 complex subunit mu | (RefSeq) AP-3 complex subunit mu-1

PATHWAY

04142    Lysosome - Bombyx mori (domestic silkworm)

GO

GO:0016192   GO:0006886   GO:0030131   GO:0015031   GO:0016020   GO:0007220   GO:0006727   GO:0008340   GO:0006887   GO:0006897   GO:0007040   GO:0030123   GO:0008565   GO:0046907   GO:0006810   GO:0016817   GO:0008270   GO:0043565   GO:0016876   GO:0043039  

Length:

416

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0501400000000001

Exp number, first 60 AAs:

0.00032

Total prob of N-in:

0.00219

outside

1  -  416

 

 

Pi

227.917363

Theta

188.510392

Tajima's D

0.777888

CLR

0

CSRT

0.591720413979301

Interpretation

Uncertain