SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08886
Pre Gene Modal
BGIBMGA007830
Annotation
Uncharacterized_protein_OBRU01_14717_[Operophtera_brumata]
Location in the cell
Nuclear   Reliability : 4.522
 

Sequence

CDS
ATGACAAGTCCAAGACGATTTAAAATTAGTGTGAGCCAGTGCACAGCCCAAAGTCTAGACTGGGATTCTCCATCAGCTGCGACAGGAACAGTAAAGAGAAGGAGATCATCATATCCGGAGCACGCTAAGAATATCAATCAAACTCAGGAACATAACACAATATTTGAAGCGCAAACCCCTTCTGACTCTGGCAGTGGCACTTCAAGGACTGTTAGTGAAAACGATAAGTCTGATAGTCTTATTGATGTAGAAGAGAGGATATCATGTATTATCAATGAAAATAGATCCTCTAACTCTGAATCTAGTGATGTAGATATCATAATAGAAAACATCTTAGAAAATTCTATAGAAGAAAACTTATGTGAAGTGCACAATGAAACGTTTGTTCATGATAGAGGTAAAACTTTTATACGCGATAAGAAAGTTCCAAATAAACGTAATTCTCAAGAAGAAGCCACACAAGACAAGAAATGTAAAGATCGAAAACCCAAAACGTCTGCACCGATTAAAAAAATAAATAAATCCACTGACGTCGTAAAGAGTCAGAGTAAATTCGCGAAGGATATCAAAAAGTTAGAAGATAAGTCTAGCGTTTTACCGGTTTATAAAAGTACGATTCCTGGTAGATCTACTGATCTGAACAGTAACGCTAAAAAGAAGGTCATATCAAAGTTGAAGTTGCCTTTCACTCCGCCTTCTGCAAAAACAATGGATAAACCAAAGATAAATTTCTTTCAAAACCGGACCAACGTGGAAGGTGCAAAACCGTCGCCTCTACTCTCATCTCCCGTCAGAAGAACAATATCAAACGAATATGTGAGGCTTAAATTTTCTAACGACACAGTGATCAGACGAACTATTGACGGAAAGTCCGCACCAAAAATAACACCTAAAATACAATCGATAATCCCTGAAAGTCCCGTCGATACCGAAGATCCCTTTCTTAATTTAAGTCCGAACAAAAAATACACTGTGACCACGAACAATAAAGTCAGATGTGATAAAGACAACTACGTGATTTTCGATCCGGACACTGGTTTTAGTCAGGGCCTATCCCGTTCTCGTATCCCGCAAATGTCACCTGTAAGTGACAAATCGCGAATACCACTCAAATCGCTCGAGCAAAGTACCAGTGCAGTGCGTAAACCAGCAAACGTTAGTGACTCGGATAGTGGTATACTATCGCCCAATTCTCCTGTGGATACTAGTGAAAAGAGTGCTTATTATGTGAACGCGGCTGTTTTCAGCGAGACAGCGAGGCAGTATACTTCTGAACTGGACATAACTATACTGGATCCAGTCCTGGCAAAGAAAGCTGCTGAGCAGATACAGGTAAGTCAAAACAATTACTAA
Protein
MTSPRRFKISVSQCTAQSLDWDSPSAATGTVKRRRSSYPEHAKNINQTQEHNTIFEAQTPSDSGSGTSRTVSENDKSDSLIDVEERISCIINENRSSNSESSDVDIIIENILENSIEENLCEVHNETFVHDRGKTFIRDKKVPNKRNSQEEATQDKKCKDRKPKTSAPIKKINKSTDVVKSQSKFAKDIKKLEDKSSVLPVYKSTIPGRSTDLNSNAKKKVISKLKLPFTPPSAKTMDKPKINFFQNRTNVEGAKPSPLLSSPVRRTISNEYVRLKFSNDTVIRRTIDGKSAPKITPKIQSIIPESPVDTEDPFLNLSPNKKYTVTTNNKVRCDKDNYVIFDPDTGFSQGLSRSRIPQMSPVSDKSRIPLKSLEQSTSAVRKPANVSDSDSGILSPNSPVDTSEKSAYYVNAAVFSETARQYTSELDITILDPVLAKKAAEQIQVSQNNY

Summary

Pfam
PF00307   CH
Interpro
IPR039041   Nav/unc-53        + More
IPR001715   CH-domain       
IPR036872   CH_dom_sf       
SUPFAM
SSF47576   SSF47576       
Gene 3D

Ontologies

GO

Topology

Length:
450
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00819
outside
1  -  450
 
 

Population Genetic Test Statistics

Pi
237.190792
Theta
182.787037
Tajima's D
0.784144
CLR
0.405265
CSRT
0.595320233988301
Interpretation
Uncertain
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