SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08883
Pre Gene Modal
BGIBMGA013783
Annotation
AF461149_1_transposase_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.647
 

Sequence

CDS
ATGGGGTTAAGAAGAACCACGGTGAAAAGGGTGTTAAATGAAGGGCTTCGGGCAAATCGAAGAAAAACAGGACATCGTTTGAATGCTCGTCTAATGGACCTGAGACTGAAGAGATGCCGCGCTTTGTTGAAGCGGTACGCGGGAAAAAAATATCGGGAAATTCTTTTTTCGGATGAAAAAATTTTTACCGTAGAAGAGAGCTACAACAAACAAAATGATAAGGTGTACGCACACAGTAGTGAAGAAGCGAGCAACCGTATTCCGCGTGTCCAACGAGGTCATTTTCCATCCTCGCTCATGGTATGGTTGGGAGTTTCTTATTGGGGCTTAACAGAGGTACATTTTTGTGAGAAAGGTGTAAAAGCGAATGCAGTTGTGTATCAAAATACAGTCCTCACGAACCTTGTGGAACCTGTTTCTCATACCATGTTCAATAACAGGCACTGGGTATTCCAACAAGATTCGGCGCCAGCTCATAGAGCGAAGAGCACACAAGACTGGCTGGCGGCGCGTGAAATCGACTTCATCCGGCACGAAGACTGGCCCTCCTCCAGTCCAGATTTGAATCCGTTAGATTACAAGATATGGCAACACTTGGAGGAAAAGGCGTGCTCAAAGCCTCATCCCAATTTGGAGTCACTCAATACATCCTTGATTAAGGCAGTCGCCGATATTGACATGGACATCGTTCGTGCTGCGATAGACGACTGGCCGGGCAGATTGAAGGCCTGTATTCAAAATCACGGAGGTCATTTTGAATAA
Protein
MGLRRTTVKRVLNEGLRANRRKTGHRLNARLMDLRLKRCRALLKRYAGKKYREILFSDEKIFTVEESYNKQNDKVYAHSSEEASNRIPRVQRGHFPSSLMVWLGVSYWGLTEVHFCEKGVKANAVVYQNTVLTNLVEPVSHTMFNNRHWVFQQDSAPAHRAKSTQDWLAAREIDFIRHEDWPSSSPDLNPLDYKIWQHLEEKACSKPHPNLESLNTSLIKAVADIDMDIVRAAIDDWPGRLKACIQNHGGHFE

Summary

Similarity
Belongs to the TGF-beta family.
Belongs to the UDP-glycosyltransferase family.
EMBL
AF461149    AAN06610.1    AB363028    BAG15927.1    AB363006    AB363010    + More
AB363014    BAG15923.1    BAG15924.1    AB473770    BAH20555.1    AB363018    BAG15926.1    RSAL01000084    RVE48403.1    RSAL01000012    RVE53510.1    RSAL01001770    RVE40705.1    RSAL01000021    RVE52408.1    RSAL01000191    RVE44681.1    RSAL01000140    RVE46091.1    RSAL01000063    RVE49524.1    U47917    AAB47739.1    KQ459680    KPJ20472.1    JF779677    AEO90418.1    RSAL01000022    RVE52367.1    RSAL01000006    RVE54275.1    RSAL01002114    RVE40580.1    RSAL01000039    RVE51021.1    RSAL01000073    RVE49012.1    RSAL01000016    RVE53060.1    LNIX01000030    OXA41211.1    RSAL01000470    RVE41612.1    RSAL01000133    RVE46339.1    RSAL01000236    RVE43715.1    RSAL01000149    RVE45804.1    JARK01001411    EYC06502.1    JOJR01000583    RCN36166.1    JOJR01000015    RCN51257.1    UYSL01019905    VDL71189.1    CAVP010059404    CDL95787.1    JARK01001601    EYB87313.1    JARK01001345    EYC27589.1    JARK01000176    EYC41234.1    PDUG01000005    PIC23776.1    JARK01000255    EYC39473.1    DS268747    EFP00909.1    JARK01001418    EYC05389.1    PDUG01000012    PIC13506.1    JARK01000059    EYC44525.1    UZAH01001595    VDO19836.1    DS268565    EFO90304.1    JARK01001337    EYC34439.1    DS268539    EFO88027.1    DS268428    EFO94379.1    DS268492    EFP11689.1    DS268508    EFO83264.1    DS268525    EFO85497.1    HE601413    CAS00486.1    DS268679    EFO98285.1    DS268421    EFO88618.1    DS268606    EFO93488.1    DS268612    EFO94085.1    PIC29926.1    DS268673    EFO98001.1    DS268466    EFP06959.1    PDUG01000001    PIC51673.1    JARK01001658    EYB84158.1    PDUG01000006    PIC20538.1    EFP11674.1    PIC28734.1    PIC53815.1    DS268545    EFO88382.1    UYSL01019770    VDL69590.1    UYSL01020440    VDL74616.1    LFYR01002220    KMZ56176.1    PDUG01000004    PIC32571.1   
Pfam
PF00019   TGF_beta        + More
PF16095   COR
PF00069   Pkinase
PF13358   DDE_3
PF00201   UDPGT
PF00292   PAX
Interpro
IPR009057   Homeobox-like_sf        + More
IPR001839   TGF-b_C       
IPR029034   Cystine-knot_cytokine       
IPR017948   TGFb_CS       
IPR015615   TGF-beta-rel       
IPR036259   MFS_trans_sf       
IPR032171   COR       
IPR020859   ROC_dom       
IPR000719   Prot_kinase_dom       
IPR011047   Quinoprotein_ADH-like_supfam       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR027417   P-loop_NTPase       
IPR038717   Tc1-like_DDE_dom       
IPR002213   UDP_glucos_trans       
IPR035595   UDP_glycos_trans_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR001523   Paired_dom       
IPR036906   ATPase_V1_fsu_sf       
SUPFAM
SSF46689   SSF46689        + More
SSF57501   SSF57501       
SSF103473   SSF103473       
SSF56112   SSF56112       
SSF52540   SSF52540       
SSF50998   SSF50998       
Gene 3D
PDB
5CR4     E-value=2.18846e-10,     Score=155

Ontologies

Topology

Subcellular location
Secreted  
Length:
253
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.61898
Exp number, first 60 AAs:
0
Total prob of N-in:
0.24763
outside
1  -  253
 
 

Population Genetic Test Statistics

Pi
46.452357
Theta
28.189044
Tajima's D
0.821155
CLR
0.34083
CSRT
0.613669316534173
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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