Gene

KWMTBOMO08881

Pre Gene Modal

BGIBMGA007835

Annotation

PREDICTED:_protein_sickie_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr15(-):7116213-7132786      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.895

CDS

ATGACCCAGCGCTTGCAGCAGCTCACAGCGACTGCCGAGAGAAAGGACTCTGAATTGACGGAGCTACGGCAGACAATCGAGTTACTTCGAAAACAGTCAATACAAGCTGGCCTGACGACCGCGCACATGCAGTCCATGGGAATCAGAGCCGATGGTGTTAACGTAACAGGACAGGATCCTCCGACACAAACGCAACAGTCATCACCGCAACGCAGCGCACAAACCGGTAATGGCGCCATCACAAGGCATCTGTCAACCGACAGTGTCTCAAGTATCAACAGTCTAAGCAGTGGGTCTTCAGCGCCACATGACAAGAAGCACAAAAAGAAAGGATGGCTTCGGTCATCGTTCACCAAAGCGTTTTCAAGAAACGCGAAGATTTCGAAGACGGCCAAACATTCATCGCTCGGACAGCTGTCGTCTCAAGACAGCTCGTCCGGCTCGCATCACTATGACGACCCTCACACAATCAGAGAGGGTAGTAACGAGAACAGTCTAGAGCATTCGCACGAAGCGTTACCTGAAACGAAGGACAAAACTGCTCCCGCCAAAACCGATGAACAGACCAAAGAAAAAGACGAATCAGTTTTGGTGGACGAATTGAAACGGCAGTTGCGAGAGAAAGATTTGGTGCTAACTGATATACGATTGGAGGCTTTAAGTTCTGCACATCAGTTGGAGAGTCTAAAAGACACTGTCATAAAGATGAGGAATGAAATGTTAAATCTAAAACAAAATAACGAGCGACTTCAAAGACTAGTCACATCCCGGTCTTTGGCTGGAAGCCAGAGTTCCCTGGGTACTGGTGGTTCGGCCGTTGAAGATCCGAGGAGATTTAGTTTGGCTGACCAAAGTACAATGCACCAGGCTTCGATAGACATTCACTCTCAGCCTCTCGATCTAGACTTTATGAGCACAACAGCCGCTTTAGACTACAAGAAAGGCTCCCCTACATCAATAGAACCAATTTACGGGAACAAGGCAGTCTGCGAACTAAATGAGAACAGCGAGACTCTATTGGGTCCTTTGAATGGATCCAGCGACTTGTTCGCTAATGGACTCAATCCAGCTGATAGATTGAGTGGGGACTATGATATTAACAGTGTACTACCACCACCGAAGAGTAGAGAACTTGCCATCGGAGAAAGCTACTCAGATATTGGTGTAGCAGACAGTCAAGGTGACACGACTGATGGGAAAAAGATTGCGATAGCTGTTTATTTAGGTCAACCGGAAACATTCCAAAGATACTTCGAGGAAGTGCAGGACACGCTCACAGAGTCCGAATGCAGGTTCTACGCGAAACAAATGGGTAGCGGCTTCGGGAACCACTTCGACAAACAACCGAGCTTCGACTCGCCGAGAATGTCCCAAAACCATAGTCCGGACGTCGAAAACCAAGACTACCCTCAAATGAATAAATCGAACACGAATAGCCTTAAGAGCAACAAATCGACGCACAGTAGTTCGTACAAAAACGTTTACAACAGTGACTCGACAATAAACTGCAATGAGTACGTCATAGCCTACACATATATCTCGGGCAAGACTACTTGGCAGAACTTAGATTATATAGTTAGGAAATCGTTTAAGGATTACTTGTCTAGGATAGATTTGGGAACGAATCTCGGTTTGAACACGGATTCTATTACGTCTTATCACCTGGGAGAAGCGACTCGGGGTCCTGAAATCGGATTTCCAGAGTTGTTGCCATGCGGATACATAGTGGGAACTGTAAACACGCTGTATATATGCTTGCAAGGAGTCGGGAGTCTGGCTTTCGACAGTCTCATACCAAAAAATATTGTATATAGATATGTATCACTATTGTCGGAGCACAGACGAGTTATTCTCTGCGGACCGAGCGGCACTGGCAAGTCGTATCTAGCCGCTAAACTTGCTGAGTTCTACGTCCAGAAAACGCAGAGACGAGGCAATCCTGCCGAAGCTGTTGCGACTTTCAATGTCGATCGGAAATCGTGTAACGAGCTGCGTGCGTATCTAGCGAACATCGCCGAACAGTGCACCGCAGCGGCGACCGGCGAGGAAGCGCCGCTACCTTCCGTTGTTGTGCTCGACAACTTGCAACATGCGTCTGCTTTGGGAGACGCTTTCGCCGGACTGTTGCCGCCCGACAATAGGAACATGCCCGTCATTATAGGAACAATGTCTCAAGCGACGTGTAATACAACTAATCTCCAACTACACCACAACTTCAGGTGGCTCCTCACTGCAAATCATATGGAACCGGTCAAAGGATTTTTGGCTAGGTACCTGCGTCGGAAACTATTCTCGCTGGAGTTGCGACTCGGCAGAAGGGAGCCAGCTTTGGCTACGGTGTTAGAATGGCTGCCAGGAGTTTGGTCCACGTTGAACGCATTCCTAGAAGCACACTCCTCAAGTGACGTCACAGTGGGACCCAGGTTGTTCCTAGCCTGTCCCATGGACTTGGAAGCTAGTCAGGCGTGGTTCGCGGACGTGTGGAATTACAGCATAGTGCCGTACGCTTCGGAAGCAGTCCGAGAAGGGGTCGCGTTGTACGGTCGGAGGAGACACGCTGCGGTCGATCCCTTGCAACACATAAAAGCATCTTATCCTTGGAGAGAACCAAACCATTCCCATACACTACGACCTATCACCGTAGACGATGTCGGTGGCGAAGAGTCTAGTCAAGATGCGACAGCTAACAACAATCAAGACCCATTGCTAAACATGCTAATGCGGCTACAAGAAGCGGCTAACTACAGCGGGAACCAAAGCCAAGACTCTGACAACGCCAGCATGGACTCGAATCTCACTCACGACAGCTCTATGGGAAACGAGTTATAA

Protein

MTQRLQQLTATAERKDSELTELRQTIELLRKQSIQAGLTTAHMQSMGIRADGVNVTGQDPPTQTQQSSPQRSAQTGNGAITRHLSTDSVSSINSLSSGSSAPHDKKHKKKGWLRSSFTKAFSRNAKISKTAKHSSLGQLSSQDSSSGSHHYDDPHTIREGSNENSLEHSHEALPETKDKTAPAKTDEQTKEKDESVLVDELKRQLREKDLVLTDIRLEALSSAHQLESLKDTVIKMRNEMLNLKQNNERLQRLVTSRSLAGSQSSLGTGGSAVEDPRRFSLADQSTMHQASIDIHSQPLDLDFMSTTAALDYKKGSPTSIEPIYGNKAVCELNENSETLLGPLNGSSDLFANGLNPADRLSGDYDINSVLPPPKSRELAIGESYSDIGVADSQGDTTDGKKIAIAVYLGQPETFQRYFEEVQDTLTESECRFYAKQMGSGFGNHFDKQPSFDSPRMSQNHSPDVENQDYPQMNKSNTNSLKSNKSTHSSSYKNVYNSDSTINCNEYVIAYTYISGKTTWQNLDYIVRKSFKDYLSRIDLGTNLGLNTDSITSYHLGEATRGPEIGFPELLPCGYIVGTVNTLYICLQGVGSLAFDSLIPKNIVYRYVSLLSEHRRVILCGPSGTGKSYLAAKLAEFYVQKTQRRGNPAEAVATFNVDRKSCNELRAYLANIAEQCTAAATGEEAPLPSVVVLDNLQHASALGDAFAGLLPPDNRNMPVIIGTMSQATCNTTNLQLHHNFRWLLTANHMEPVKGFLARYLRRKLFSLELRLGRREPALATVLEWLPGVWSTLNAFLEAHSSSDVTVGPRLFLACPMDLEASQAWFADVWNYSIVPYASEAVREGVALYGRRRHAAVDPLQHIKASYPWREPNHSHTLRPITVDDVGGEESSQDATANNNQDPLLNMLMRLQEAANYSGNQSQDSDNASMDSNLTHDSSMGNEL

Uniprot

H9JE88   S4P739   A0A2A4JST5   A0A2H1WBQ3   A0A212FKS5   A0A194PIU0   + More
A0A194RDK9   A0A0L7KMY9   B4MW79   U5EE99   B4JR84   A0A0Q9XG53   A0A0Q9XFQ5   A0A0Q9X657   A0A0Q9X6S8   B4KHV6   A0A0Q9XHK9   A0A0Q9X673   A0A0Q9X700   A0A336K5X1   A0A336LQC8  

Pubmed

19121390    23622113    22118469    26354079    26227816    17994087    + More
18057021   

EMBL

BABH01002752    BABH01002753    BABH01002754    GAIX01004769    JAA87791.1    NWSH01000638    + More
PCG75105.1    ODYU01007285    SOQ49924.1    AGBW02007995    OWR54344.1    KQ459602    KPI93237.1    KQ460367    KPJ15544.1    JTDY01008672    KOB64451.1    CH963857    EDW75949.2    GANO01004394    JAB55477.1    CH916372    EDV99414.1    CH933807    KRG03726.1    KRG03730.1    KRG03727.1    KRG03725.1    EDW13393.2    KRG03729.1    KRG03728.1    KRG03731.1    KRG03732.1    KRG03733.1    UFQS01000114    UFQT01000114    SSW99841.1    SSX20221.1    SSW99842.1    SSX20222.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053268    UP000053240    UP000037510    + More
UP000007798    UP000001070    UP000009192   

PRIDE

H9JE88   

Pfam

PF13401   AAA_22        + More
PF00004   AAA
PF00307   CH

Interpro

IPR003593   AAA+_ATPase        + More
IPR039041   Nav/unc-53       
IPR027417   P-loop_NTPase       
IPR003959   ATPase_AAA_core       
IPR036872   CH_dom_sf       
IPR001715   CH-domain       

SUPFAM

SSF52540   SSF52540        + More
SSF47576   SSF47576       

Gene 3D

1.10.418.10    

CDD

cd00014  CH

ProteinModelPortal

H9JE88   S4P739   A0A2A4JST5   A0A2H1WBQ3   A0A212FKS5   A0A194PIU0   + More
A0A194RDK9   A0A0L7KMY9   B4MW79   U5EE99   B4JR84   A0A0Q9XG53   A0A0Q9XFQ5   A0A0Q9X657   A0A0Q9X6S8   B4KHV6   A0A0Q9XHK9   A0A0Q9X673   A0A0Q9X700   A0A336K5X1   A0A336LQC8  

KEGG

101747129    K19483 neuron navigator 2 [EC:3.6.4.12] | (RefSeq) protein sickie

GO

GO:0022008   GO:0005524  

PANTHER

PTHR12784  

Length:

942

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02212

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00010

outside

1  -  942

 

 

Pi

27.439092

Theta

231.644383

Tajima's D

0.530341

CLR

0.487324

CSRT

0.524973751312434

Interpretation

Uncertain