SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08880
Pre Gene Modal
BGIBMGA007707
Annotation
PREDICTED:_FGFR1_oncogene_partner-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.801
 

Sequence

CDS
ATGGCGCAATCCGAAGACACCGAACTCAGGGACTTGGTGATCGAAGCTTTAGAAAAGAACGGATCATTAGCGAAAATACGCGCTTTGCTCCGGGCAAATGTTTTTTTGGCTTTCGAGGAAGATTGTGACATTAAACAAAATCCGAGCTTAGACAACATCTTTAACTTACCCGAAGAGTCGCGTCAAGAAAGAGAATACAAATACGAAGGGAAGAAATCGCTTAACGGTAAACTTTACCTCGACAAACAAGGCCTTAAGGAACCGATTCTAGTATCACTGATTAAATCTTACCACCAAAATAAATACTTTGAAAAGAAGAGACACACTAAAGAAGATAAAATGAACCGGAGCAAGTTAAAGGAAAATCATACTTATCTAGTACATGACGACTCTCAGACGAGTACTACCAGCAATTCTCTTTCAGATATATCCTCTGATGACAGAAATAAATTACGCTTAAGACTCAATTTAGATAATTCCGATACTGACACTTCTAGTGAATCTGCTAAAGAAAAGTCGAGTTCAGAATATATTCCCGGGGACCACATTATAGAGATGAAAAAAGGAACCAATACTCAAAGTGTTATACAACACACCAATGGCTCATTACATAATAATCAAAATCACAGCATACCAAATGCCCCAGAACTGAAATCATCATTGTATGACACTTTGAAAGAATTCCGTGCATTACCTAGTAGTAGTGATTCTACCTCATATGCAGAATTAAAACCATTCCAAACTATAGATGATCTTAATAAAGTTGCATTACAAGGAACACAACAGAAATATAATGCTGATATTGTACAGCCTGCTCCTTCTTATTCTATAGGAAATTTGAGGAGTGAATCACAGCACATTGTTGATTCATCCAAATCTGGAACAATAAGTAGTGCTTCATCCTTATCATCAAAAGAGCGACATATAAGCGCTAGTAAATCTAAAGATGGAAAACCCTCAATTGATTCTCGTATATCTGAAGCTGATACAGTGGAGTATAGTAATGACTTTTCAACATCATCACCTAAATTTAACAAAAGTCCTCACAAAGAATCTACTAAACGATCAAATGATAATAGTCACAAAAATATTTCAATAGAAAGTCAAAATCAAGGGTCACAGAGCTCGCGCAGTTCGATTTCGATTTCTGATATTGCTGATTTGATGAGTGAAAAAAGTTCCTCTAACGAGAATAATTCTAAAATTGATCATTCAACAAATAAATCAAAGTTATCACAAAGTGTTCTACATAGTAAATCTAATATAAGACAGAATAAGAGTTTAAGTGATGATTCTGGGGATTTCACAGAATCACCAATACATTCATTGTCTAATCTTAGTTTAGACATTCACAGTGACTAA
Protein
MAQSEDTELRDLVIEALEKNGSLAKIRALLRANVFLAFEEDCDIKQNPSLDNIFNLPEESRQEREYKYEGKKSLNGKLYLDKQGLKEPILVSLIKSYHQNKYFEKKRHTKEDKMNRSKLKENHTYLVHDDSQTSTTSNSLSDISSDDRNKLRLRLNLDNSDTDTSSESAKEKSSSEYIPGDHIIEMKKGTNTQSVIQHTNGSLHNNQNHSIPNAPELKSSLYDTLKEFRALPSSSDSTSYAELKPFQTIDDLNKVALQGTQQKYNADIVQPAPSYSIGNLRSESQHIVDSSKSGTISSASSLSSKERHISASKSKDGKPSIDSRISEADTVEYSNDFSTSSPKFNKSPHKESTKRSNDNSHKNISIESQNQGSQSSRSSISISDIADLMSEKSSSNENNSKIDHSTNKSKLSQSVLHSKSNIRQNKSLSDDSGDFTESPIHSLSNLSLDIHSD

Summary

Pfam
PF09398   FOP_dimer
Interpro
IPR006594   LisH        + More
IPR018993   FOP_dimerisation-dom_N       

Ontologies

Topology

Length:
453
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
9e-05
Exp number, first 60 AAs:
9e-05
Total prob of N-in:
0.00575
outside
1  -  453
 
 

Population Genetic Test Statistics

Pi
61.052461
Theta
149.59833
Tajima's D
-1.792728
CLR
583.168845
CSRT
0.0286985650717464
Interpretation
Uncertain
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