SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08872
Pre Gene Modal
BGIBMGA007839
Annotation
PREDICTED:_1-acyl-sn-glycerol-3-phosphate_acyltransferase_alpha-like_[Amyelois_transitella]
Full name
1-acyl-sn-glycerol-3-phosphate acyltransferase      
Location in the cell
Cytoplasmic   Reliability : 1.149 PlasmaMembrane   Reliability : 1.711
 

Sequence

CDS
ATGTTCAATATTTGGCATGTTGCCGATAAAGTGGCAGCAGTTGCAAGGAAAGAGATATTTTATGTTTGGCCATTCGGCTTAGCAGCATATTTGGCTGGTGTTGTATTCATAGACCGAAATAATTCTAAAGATGCCTACAAACAGTTGGAAATCACTTCTGAAGTCATGGTGAAGAATAAAACAAAGATCTGGTTGTTCCCTGAAGGCACAAGGAATAAGGATTTTACCAAATTGTTACCATTCAAAAAGGGAGCATTCAACATTGCAGTAGCCGCACAAGTTCCAATTATACCTGTTATATATTCACCGTACTATTTTATCAACAGAAGAAAATGTATTTTTGATAAAGGTCACGTCATAATTCAGTGCCTAGAGCCGGTAACCACCGAAGGTCTGACGATGCGGGACGTGCCCGAGCTGATCGAACGAGTGCGCAACATGATGGACGCCGCATACAAAGAACTTTCGAAAGAGGTACTGAGCGCACTCCCACCTAACTACCCGCTCGCTACGACGGATTGA
Protein
MFNIWHVADKVAAVARKEIFYVWPFGLAAYLAGVVFIDRNNSKDAYKQLEITSEVMVKNKTKIWLFPEGTRNKDFTKLLPFKKGAFNIAVAAQVPIIPVIYSPYYFINRRKCIFDKGHVIIQCLEPVTTEGLTMRDVPELIERVRNMMDAAYKELSKEVLSALPPNYPLATTD

Summary

Catalytic Activity
a 1-acyl-sn-glycero-3-phosphate + an acyl-CoA = a 1,2-diacyl-sn-glycero-3-phosphate + CoA
Similarity
Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
Feature
chain  1-acyl-sn-glycerol-3-phosphate acyltransferase
EC Number
2.3.1.51
EMBL
JX847007    AGG55024.1    BABH01002768    RSAL01000255    RVE43422.1    MF687666    + More
ATJ44592.1    JX846994    AGG55011.1    NWSH01005665    PCG64070.1    JX846978    AGG54995.1    KQ459602    KPI93233.1    KQ460367    KPJ15550.1    GEYN01000176    JAV44813.1    NWSH01000503    PCG75995.1    KT261723    ALJ30263.1    JX846980    AGG54997.1    MF706182    ATJ44609.1    JX846996    AGG55013.1    MF687664    ATJ44590.1    KJ579238    AIN34714.1    BABH01002767    JX847008    AGG55025.1    AGBW02008520    OWR53099.1    ODYU01007807    SOQ50885.1    KPI93234.1    KPJ15549.1    AK401267    BAM17889.1    RVE43421.1    OWR53100.1    NEVH01009384    PNF33195.1    PNF33197.1    ODYU01009125    SOQ53328.1    GEDC01012930    JAS24368.1    PCG64071.1    JX846995    AGG55012.1    KK852869    KDR14660.1    GECU01014744    JAS92962.1    PYGN01000565    PSN44158.1    GECZ01000809    JAS68960.1    GEBQ01028190    JAT11787.1    DS235277    EEB14299.1    AXCM01005544    JTDY01005891    KOB66506.1    KQ981768    KYN35877.1    ADMH02001019    ETN64415.1    KQ981091    KYN09551.1    GBHO01033684    GBHO01033683    GBHO01033682    GBRD01009564    GBRD01009563    GBRD01009562    GDHC01008152    JAG09920.1    JAG09921.1    JAG09922.1    JAG56260.1    JAQ10477.1    NNAY01001120    OXU25070.1    KK854198    PTY12968.1    ATLV01013150    KE524842    KFB37355.1    KK852771    KDR16862.1    APCN01002042    AAAB01008987    EAA01231.5    GL888327    EGI62764.1    ADTU01015495    KZ288388    PBC26399.1    CH933810    EDW07735.1    JRES01001143    KNC25189.1    KQ976698    KYM77443.1    AK417993    BAN21208.1    JTDY01003006    KOB70324.1    KQ414654    KOC65976.1    AXCN02000016    KQ976973    KYN06682.1    JR040716    JR040717    AEY59257.1    AEY59258.1    CH916370    EDV99916.1    KQ982294    KYQ58362.1    KQ971380    EEZ97656.1    GECZ01025444    JAS44325.1    GEHC01000268    JAV47377.1    GAPW01002344    JAC11254.1    GL732568    EFX76482.1    KQ434998    KZC13289.1    GECU01034469    GECU01000612    JAS73237.1    JAT07095.1    GL437990    EFN69731.1    KK107566    QOIP01000006    EZA48899.1    RLU21916.1    CH477205    EAT47921.1    KQ760357    OAD60753.1    CH963925    EDW78378.2    CH379064    KRT06685.1    GFDF01002662    JAV11422.1    GFTR01004341    JAW12085.1    AE014298    AY118588    AAF48201.1    AAM49957.1    AAN09316.1    CM000162    EDX01496.1    GBGD01002541    JAC86348.1    CH902622    EDV34568.1    KPU75201.1   
Pfam
PF01553   Acyltransferase
Interpro
IPR004552   AGP_acyltrans        + More
IPR002123   Plipid/glycerol_acylTrfase       
PDB
5KYM     E-value=4.24754e-11,     Score=159

Ontologies

Topology

Length:
173
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
41.03113
Exp number, first 60 AAs:
18.55083
Total prob of N-in:
0.95029
POSSIBLE N-term signal
sequence
inside
1  -  19
TMhelix
20  -  37
outside
38  -  84
TMhelix
85  -  107
inside
108  -  173
 
 

Population Genetic Test Statistics

Pi
178.285068
Theta
164.394939
Tajima's D
-0.452278
CLR
1.801653
CSRT
0.248137593120344
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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