Gene

KWMTBOMO08867

Pre Gene Modal

BGIBMGA007841

Annotation

high-affinity_copper_uptake_protein_1_[Bombyx_mori]

Location

Bomo_Chr15(-):6753059-6761195      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 2.395

CDS

ATGGACGAACATCATGAACACCACAATATGGATATGGGCCATGCTGGGCATGAACACCATGGGATTGATCATTCAAGACATATAGGCCACCAAATGCCTATTAATGGACTTCTTAATTCATCATATAACAGAATTGTGCACAACACAGATATGAATGATCACAATGTCCACACTTTTTCAGGCCATGGTGATCACAGTAGCCACAATATGGGCATGTCCATGACGTTTCACGGTGGCTACATTGAAACTATTCTCTTCTCTTGGTGGAACGTAACAGAAGTTGGTGAATTTGTGGGATCATTTTTTGCAATATTTATTATAGCTTTGCTCTATGAAGGCCTTAAATATTATAGAAAGCATTTACTATGGAAGACATATGCAGGACTACAGTATTGTGCCGTAGCACCACCAGACAAGGGAGTTGCCAATATTTGTGCAGCAGATGAACCACAAATTGTACAGCCAATTCCTCATATGCTTGAAAGAAATGTTCCTACGATGATGAGCACAGCACACGCATGGCAAACGATACTTCATGGGGTTCAAGTGCTAGTTAGTTATATGTTGATGTTGGTTTTTATGACTTACAACACATGGCTGTGCGCTGCTGTAGTATTAGGATCAGCGACAGGGTACTTCCTCTTTGGTTGGCGCGAATCGGTAGTTGTTGACTTCACTGAACATTGTCACTGA

Protein

MDEHHEHHNMDMGHAGHEHHGIDHSRHIGHQMPINGLLNSSYNRIVHNTDMNDHNVHTFSGHGDHSSHNMGMSMTFHGGYIETILFSWWNVTEVGEFVGSFFAIFIIALLYEGLKYYRKHLLWKTYAGLQYCAVAPPDKGVANICAADEPQIVQPIPHMLERNVPTMMSTAHAWQTILHGVQVLVSYMLMLVFMTYNTWLCAAVVLGSATGYFLFGWRESVVVDFTEHCH

Uniprot

Q2F612   H9JE94   A0A2A4K282   A0A3S2NMF5   S4PH06   I4DJU1   + More
A0A194PJL6   A0A194RDL8   A0A212FH86   A0A1E1W982   A0A1E1VZV2   A0A2H1WFZ9   A0A1E1WQM7   A0A1E1WTZ0   A0A1E1WL17   A0A0C9QS65   A0A154P7E9   A0A0C9RE16   U5EZV7   A0A195BCV2   A0A158NIL0   E2BFD4   A0A1B6IF45   A0A232EY60   E2AVX5   A0A1B6HKH3   A0A0J7KXD9   A0A2J7PJ01   E0VNQ9   D6WCT1   A0A067R650   F4WPY2   N6T4U7   K7IRK0   A0A0P4W018   A0A1W4WS24   A0A1B6IPK9   A0A0L7R5F1   A0A1B6I9I9   R4G5Z0   A0A1J1HNR6   A0A2P8YLM4   Q16JJ6   A0A023EKM5   A0A088ACD2   A0A2A3EH69   W8BY43   V9IEK1   W8BMM3   V5GWU8   A0A0Q9W7H9   A0A1W4WS28   A0A023EKL4   A0A182F7Y9   A0A0K8V246   W5J979   A0A3R7N8U2   A0A2M3ZHU4   T1DSW0   A0A2M4BZT9   A0A0M9A8H4   A0A2M4BY30   A0A034VMC8   Q16JJ7   A0A0A1XHP6   A0A0R3NY01   A0A2M4AMD9   A0A2M4AL66   A0A3B0J967   W8C6V7   A0A0P4VLM0   R4FMH5   A0A0K8WJZ7   A0A0Q9XFG9   B4L5X4   A0A182G1Q8   A0A0M3QZJ9   A0A182H043   Q16JJ5   A0A0Q9WVR3   A0A1W4VSI3   A0A182QPS0   A0A069DP13   B4PYU1   C8VV93   A0A182VRE2  

Pubmed

19121390    23622113    22651552    26354079    22118469    21347285    + More
20798317    28648823    20566863    18362917    19820115    24845553    21719571    23537049    20075255    29403074    17510324    24945155    24495485    17994087    18057021    20920257    23761445    25348373    25830018    15632085    23185243    27129103    26483478    26334808    17550304   

EMBL

DQ311260    ABD36205.1    BABH01002779    NWSH01000248    PCG78038.1    RSAL01000255    + More
RVE43429.1    GAIX01005980    JAA86580.1    AK401559    BAM18181.1    KQ459602    KPI93228.1    KQ460367    KPJ15554.1    AGBW02008520    OWR53105.1    GDQN01007502    JAT83552.1    GDQN01010801    JAT80253.1    ODYU01008424    SOQ52015.1    GDQN01001908    JAT89146.1    GDQN01000748    JAT90306.1    GDQN01003503    JAT87551.1    GBYB01006594    JAG76361.1    KQ434831    KZC07807.1    GBYB01006595    JAG76362.1    GANO01000058    JAB59813.1    KQ976513    KYM82388.1    ADTU01016901    GL448009    EFN85594.1    GECU01035441    GECU01022147    GECU01018837    JAS72265.1    JAS85559.1    JAS88869.1    NNAY01001716    OXU23148.1    GL443213    EFN62397.1    GECU01032516    JAS75190.1    LBMM01002320    KMQ94986.1    NEVH01024952    PNF16283.1    DS235341    EEB15015.1    KQ971311    EEZ98850.1    KK852930    KDR13640.1    GL888257    EGI63740.1    APGK01052662    KB741213    ENN72648.1    GDRN01099761    JAI58715.1    GECU01036249    GECU01033103    GECU01023676    GECU01022288    GECU01021514    GECU01018851    JAS71457.1    JAS74603.1    JAS84030.1    JAS85418.1    JAS86192.1    JAS88855.1    KQ414654    KOC66049.1    GECU01030219    GECU01024105    GECU01009068    JAS77487.1    JAS83601.1    JAS98638.1    GAHY01000100    JAA77410.1    CVRI01000014    CRK89687.1    PYGN01000508    PSN45152.1    CH478006    EAT34445.1    GAPW01003882    JAC09716.1    KZ288256    PBC30632.1    GAMC01008324    JAB98231.1    JR039545    AEY58749.1    GAMC01008322    JAB98233.1    GALX01003718    JAB64748.1    CH940653    KRF80780.1    KRF80781.1    KRF80782.1    GAPW01003897    JAC09701.1    GDHF01019461    JAI32853.1    ADMH02002023    ETN59943.1    QCYY01001124    ROT80376.1    GGFM01007383    MBW28134.1    GAMD01001309    JAB00282.1    GGFJ01009422    MBW58563.1    KQ435712    KOX79390.1    GGFJ01008507    MBW57648.1    GAKP01014461    JAC44491.1    EAT34444.1    GBXI01006553    GBXI01003810    JAD07739.1    JAD10482.1    CH379063    KRT05832.1    KRT05833.1    KRT05834.1    GGFK01008619    MBW41940.1    GGFK01008215    MBW41536.1    OUUW01000003    SPP78804.1    GAMC01008326    JAB98229.1    GDKW01003026    JAI53569.1    ACPB03007038    GAHY01001714    JAA75796.1    GDHF01001129    JAI51185.1    CH933811    KRG07029.1    EDW06583.1    JXUM01038857    KQ561182    KXJ79454.1    CP012528    ALC49509.1    JXUM01100721    JXUM01100722    JXUM01100723    JXUM01100724    JXUM01100725    KQ564592    KXJ72044.1    EAT34446.1    CH964239    KRF99560.1    AXCN02000277    AXCN02000278    GBGD01003081    JAC85808.1    CM000162    EDX01027.1    KRK05897.1    KRK05898.1    KRK05899.1    KRK05901.1    BT099839    ACW83547.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000053268    UP000053240    UP000007151    + More
UP000076502    UP000078540    UP000005205    UP000008237    UP000215335    UP000000311    UP000036403    UP000235965    UP000009046    UP000007266    UP000027135    UP000007755    UP000019118    UP000002358    UP000192223    UP000053825    UP000183832    UP000245037    UP000008820    UP000005203    UP000242457    UP000008792    UP000069272    UP000000673    UP000283509    UP000053105    UP000001819    UP000268350    UP000015103    UP000009192    UP000069940    UP000249989    UP000092553    UP000007798    UP000192221    UP000075886    UP000002282    UP000075920   

PRIDE

Q2F612    H9JE94    C8VV93   

Pfam

PF04145   Ctr

Interpro

IPR007274   Cop_transporter       

ProteinModelPortal

Q2F612   H9JE94   A0A2A4K282   A0A3S2NMF5   S4PH06   I4DJU1   + More
A0A194PJL6   A0A194RDL8   A0A212FH86   A0A1E1W982   A0A1E1VZV2   A0A2H1WFZ9   A0A1E1WQM7   A0A1E1WTZ0   A0A1E1WL17   A0A0C9QS65   A0A154P7E9   A0A0C9RE16   U5EZV7   A0A195BCV2   A0A158NIL0   E2BFD4   A0A1B6IF45   A0A232EY60   E2AVX5   A0A1B6HKH3   A0A0J7KXD9   A0A2J7PJ01   E0VNQ9   D6WCT1   A0A067R650   F4WPY2   N6T4U7   K7IRK0   A0A0P4W018   A0A1W4WS24   A0A1B6IPK9   A0A0L7R5F1   A0A1B6I9I9   R4G5Z0   A0A1J1HNR6   A0A2P8YLM4   Q16JJ6   A0A023EKM5   A0A088ACD2   A0A2A3EH69   W8BY43   V9IEK1   W8BMM3   V5GWU8   A0A0Q9W7H9   A0A1W4WS28   A0A023EKL4   A0A182F7Y9   A0A0K8V246   W5J979   A0A3R7N8U2   A0A2M3ZHU4   T1DSW0   A0A2M4BZT9   A0A0M9A8H4   A0A2M4BY30   A0A034VMC8   Q16JJ7   A0A0A1XHP6   A0A0R3NY01   A0A2M4AMD9   A0A2M4AL66   A0A3B0J967   W8C6V7   A0A0P4VLM0   R4FMH5   A0A0K8WJZ7   A0A0Q9XFG9   B4L5X4   A0A182G1Q8   A0A0M3QZJ9   A0A182H043   Q16JJ5   A0A0Q9WVR3   A0A1W4VSI3   A0A182QPS0   A0A069DP13   B4PYU1   C8VV93   A0A182VRE2  

PDB

6M98     E-value=1.18039e-21,     Score=252

KEGG

692872    K14686 solute carrier family 31 (copper transporter), member 1 | (RefSeq) high-affinity copper uptak

GO

GO:0005375   GO:0016021   GO:0006878   GO:0005886   GO:0002027   GO:0035246   GO:0008270   GO:0015074   GO:0016817   GO:0043565   GO:0016876   GO:0043039  

PANTHER

PTHR12483  

Length:

230

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

58.32334

Exp number, first 60 AAs:

0.00418

Total prob of N-in:

0.27766

outside

1  -  96

TMhelix

97  -  114

inside

115  -  183

TMhelix

184  -  206

outside

207  -  230

 

 

Pi

242.456887

Theta

200.102899

Tajima's D

0.579053

CLR

0.274832

CSRT

0.542022898855057

Interpretation

Uncertain