SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08862
Annotation
PREDICTED:_surfeit_locus_protein_6_homolog_[Papilio_xuthus]
Location in the cell
Nuclear   Reliability : 2.687
 

Sequence

CDS
ATGATTGTTCAGAAGAAACCTAGGAAAAATAAACAAGTAAAAAATGAGTTGCAGAGAGAGTTCAACTTTATAAAAGGCATATTTTCAGTTATGCCTGTTTCAATTTTAACAAAAGGTGCCGATGAAGACGCAGACTATGAAATCTATACAGGCAGTAAAAATGAAAATGAGGAAAAGGATTTACCAAAACGGGCCCGGAGCATTGCTGAGTTGGAAGAGAAATTGGAAAAATTGAAATCACAACAAAAACATAATTTGAAAACAAAACTCGTAAAAAAGAGTTTAAATAGTAAATTAAATAAAAAAATTAAAAAGAAAGAAAGATTGAATAAAACAAAAAAACTAAACATAGATAAATCATTGTTGGAGGATGAGAATAATCAAATTGAACAGAAACATAAAATTTCCGCACCTAAACCAGTTTTCAATACAGATGCGAAATTAGTATTTTCAAAGTTTAATTTTGATAATTTTGGCAATAAAGAAAAGGGATCTAAAACTGAAAAAAATCCTAAAAAAATTCTAGAAAATTTAAAACACCAAGATGAGAAGTTTAGAGAAATGGAGGAAAAGGAAGACAAAACTAAAGTTAAGGAGATGAAGGAAAAGTTGGCATGGAAAACAATTTTACAGAAAGCTGAGGGACAAAAAGTTAAAGATGATCCAATGTTATTGAAGAAATCTATAAAAAAAATGGTAAGTCCATAA
Protein
MIVQKKPRKNKQVKNELQREFNFIKGIFSVMPVSILTKGADEDADYEIYTGSKNENEEKDLPKRARSIAELEEKLEKLKSQQKHNLKTKLVKKSLNSKLNKKIKKKERLNKTKKLNIDKSLLEDENNQIEQKHKISAPKPVFNTDAKLVFSKFNFDNFGNKEKGSKTEKNPKKILENLKHQDEKFREMEEKEDKTKVKEMKEKLAWKTILQKAEGQKVKDDPMLLKKSIKKMVSP

Summary

Pfam
PF04935   SURF6
Interpro
IPR007019   SURF6        + More
IPR029190   Rrp14/SURF6_C       

Ontologies

GO

Topology

Length:
235
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.12637
Exp number, first 60 AAs:
1.12637
Total prob of N-in:
0.37817
outside
1  -  235
 
 

Population Genetic Test Statistics

Pi
85.565262
Theta
139.410396
Tajima's D
-1.097567
CLR
1956.840807
CSRT
0.117394130293485
Interpretation
Uncertain
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