SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08861  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007845
Annotation
putative_mitochondrial_ribosomal_protein?_L51_[Operophtera_brumata]
Full name
39S ribosomal protein L51, mitochondrial      
Location in the cell
Mitochondrial   Reliability : 3.692
 

Sequence

CDS
ATGAGCTGGTTAACTTCGAGGATTCTAAGCGTTGTTTGGAAACCCACAGTAAACGTTGTAAGGACAAGATATCACGCCGATAAAAAACGATTAGTCAGGAGATATGGCTACCAAGAGAAAATCTGGCGTGGTGGACTCTTGCCTAGATCTGAAGGAAAGGCACTACCAATACCTGAATACAGACCTGATAATCCTTGGTCAGTAAGAAAAGCTCTTTTTGGACAAAATGACTATATAGACATTTTAGGACCTGGTAATCTACATCCAGTTAAAACATTATATAATATACCGTCATGGATTCGGGGTGTGAGTGGACATGAATATCATATCCTACTAAGAAAAAAGAAAATGTGGGCAAAAACTGGTACACCTAGATTGAGACCTACAAAATGGAAGGAAATACAAAAGCGCTTGTCGTTCCTGTATAGAAAACTAAATAGAAAAACGAAGACAGGACCTTCACCAATTTAA
Protein
MSWLTSRILSVVWKPTVNVVRTRYHADKKRLVRRYGYQEKIWRGGLLPRSEGKALPIPEYRPDNPWSVRKALFGQNDYIDILGPGNLHPVKTLYNIPSWIRGVSGHEYHILLRKKKMWAKTGTPRLRPTKWKEIQKRLSFLYRKLNRKTKTGPSPI

Summary

Subunit
Component of the mitochondrial ribosome large subunit (39S) which comprises a 16S rRNA and about 50 distinct proteins (By similarity).
Similarity
Belongs to the mitochondrion-specific ribosomal protein mL51 family.
Keywords
Complete proteome   Mitochondrion   Reference proteome   Ribonucleoprotein   Ribosomal protein   Transit peptide  
Feature
chain  39S ribosomal protein L51, mitochondrial
EMBL
BABH01002787    BABH01002788    JTDY01003005    KOB70326.1    KQ459602    KPI93223.1    + More
KQ460367    KPJ15562.1    ODYU01008424    SOQ52009.1    RSAL01000230    RVE43854.1    NWSH01000248    PCG78047.1    AGBW02008520    OWR53110.1    JXUM01042299    GAPW01005220    KQ561318    JAC08378.1    KXJ79011.1    CH477643    EAT37895.1    DS232107    EDS35014.1    KQ760478    OAD60217.1    GFDL01008800    JAV26245.1    AXCN02000040    APCN01003126    AAAB01008844    EAA06096.4    AXCM01007023    ATLV01012999    KE524833    KFB37113.1    GGFJ01010099    MBW59240.1    GGFM01005304    MBW26055.1    GGFJ01010098    MBW59239.1    GGFK01009260    MBW42581.1    GGFJ01010091    MBW59232.1    ADMH02001961    ETN60243.1    KQ435876    KOX70114.1    GGFK01009328    MBW42649.1    KQ981606    KYN39601.1    KQ983238    KYQ46271.1    GGFM01007835    MBW28586.1    GL763289    EFZ19957.1    KQ978904    KYN27553.1    ADTU01000267    LBMM01000449    KMQ98316.1    GANO01003509    JAB56362.1    CH940649    EDW64590.1    KK897593    KK852672    KDQ65279.1    KDR18779.1    KQ414590    KOC70379.1    AJVK01009723    GAMD01002525    JAA99065.1    CM000361    CM002910    EDX04267.1    KMY89120.1    GL888609    EGI59070.1    CH480818    EDW52169.1    GL449414    EFN82744.1    AE014134    AY051652    KQ977151    KYN05269.1    NEVH01018378    PNF23553.1    CH933807    EDW12347.1    CM000157    EDW88547.1    KK107250    QOIP01000002    EZA54378.1    RLU25446.1    CH902620    EDV31804.1    CCAG010000321    EZ423209    ADD19485.1    GFDL01008796    JAV26249.1    CH479184    EDW37218.1    CH379058    CH475461    EDY71204.1    CH954177    EDV58274.2    CVRI01000067    CRL06519.1    GL440715    EFN65467.1    PYGN01000249    PSN50156.1    CH963920    EDW78126.1    GFDF01001653    JAV12431.1    OUUW01000010    SPP85912.1    GFDF01001652    JAV12432.1    KZ288320    PBC28249.1    GEZM01036337    GEZM01036336    GEZM01036335    GEZM01036334    GEZM01036333    GEZM01036332    GEZM01036331    GEZM01036330    GEZM01036329    GEZM01036328    GEZM01036327    GEZM01036326    JAV82801.1    ACPB03025846    JXJN01024951    UFQT01000257    SSX22473.1    AJWK01002423    GBXI01017624    JAC96667.1    JRES01001227    KNC24469.1    GAKP01002345    JAC56607.1    CH916368    EDW02928.1    GDHF01020257    JAI32057.1    GDHF01025638    JAI26676.1    GECL01001486    JAP04638.1    CP012523    ALC38276.1    GDHC01015835    JAQ02794.1    GBGD01003370    JAC85519.1    GBHO01030982    GBRD01005416    JAG12622.1    JAG60405.1    GALX01006642    JAB61824.1   
Pfam
PF10244   MRP-L51
Interpro
IPR019373   Ribosomal_L51_mit       
PDB
6NU3     E-value=3.70821e-07,     Score=124

Ontologies

Topology

Subcellular location
Mitochondrion  
Length:
156
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01119
Exp number, first 60 AAs:
0.00921
Total prob of N-in:
0.08651
outside
1  -  156
 
 

Population Genetic Test Statistics

Pi
326.944099
Theta
226.247276
Tajima's D
1.522237
CLR
0
CSRT
0.795010249487526
Interpretation
Uncertain
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