SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08860
Annotation
PREDICTED:_glucose_dehydrogenase_[FAD?_quinone]_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 0.942
 

Sequence

CDS
ATGCGATGTGTCTTCCTTCTCCTATACGTCACGGCTGTAAGAGGTTTAGACGCCAACTTCTTTTTTGATTACTGGACCGACTTATTCCGGCCTTGGCCATTGAACCCTAAGGAGGGTTTCGTTCAGGACTATACACCTAAACACCGAGAAGAGTTTGACTTCATCGTTGTAGGAGCTGGATCTGCGGGATGCGTTATCGCAAACCGACTAACTGAAGTGCCGCAATGGAAAGTTCTACTTATCGAAGCAGGAGGCAATGAAAACTTTTTCTCGGATGTTCCAATATTCGCTTCGTTTTTGTCAATGACACCTATGAACTGGGGCTATACCTCAGAGCCGGAACCACGAGCGTGTAAGGATTTAAGAGGGAAAGTCTGTTTTCTTCCCCGAGGAAAAGTACTTGGCGGTAGTAGCGTACTTAACTTTTTAATATACCAAAGGGGACACCCTGAAGATTATAATGACTGGGCGAGAATGGGTAATCCAGGTTGGAGCTATGACGATATATTACAATACTTTAAAAAGTCGGAAAACATCAAAATAGATGAATTGAAAAACTCCTCATACCATGGAAGAAATGGATATTTAGACATAGACCATGCTCCTTATAAGTCTCCCTTGGAAAAAGTATTTAGAAAAGCCGGCGAAGAGCTCGGTTACGAATGGCGGGACCCTAACGGGGAACATATGATGGGTTTCTCAAAACCTCAAGCTACAATGAGAAACGGTAGAAGATGCAGTTCGTCGAAAGCATTTCTAGAGCCTGTCCGTTTTAGAAGAAATTTGAAAGTTACCAAACACACCATCGTCACAAAAATATTAATAAAACCTCAAACCAAAACAATTTATGGTGTAGAATTCATCAAACGAAATAAAAGATACAGGGTTCTAGCACGCAGAGAAGTAATTTTATCGGCTGGCACCATTGGTTCAGCTCAGCTGTTGATGCTCTCAGGTGTGGGACCAACTGAACACTTAGAGAAGATGGGCATACGTACTCTGGTTGACCTCCCTGTCGGATACAATCTACAAGATCATGTTACTTTCTCCGGAAACGCATTCATAGTCAATGACTCTAGGCTTTGTGTTAACGATTTAACGGCTGCATCACCTTTCTCAGCGGCATCATATATGACGGGCAAGGGCCCTTTAACGCTTCCAGGCGGAGCTGCCGGCCTAGCATTCATACGTACTAATGTATCAAACGATTCAGTAGCAAGCCGGCCAGACATGGAACTAGTCATGGGAGCAGGGTCTCTGGCCGGAGATTTTATAGGAATTTTGCGTTCTTTACTCGGAGTTACAGATAAATGGTTCTGGAAAGTCTACGGTACACTTCCCCCGAAAGTGAGATGGCGTACTTTCTCTCTCAACCCTGTACTGATTCGCCCAAGGAGCGTTGGACGACTTATGTTAAGAAGTTCAAATTTTTTCGACCATCCGAGAATTCAACCGAACTACTTCAGTGATTTGAATGACCTCAAGGCTATGGTACAAGGAGTCCGAATGATTGAAAATATAATAGGAACAAAAGCATTTCAACAGTACAATACAAAACTACATGATATACCATTTCCTGGTTGCGAACATCTAATCTTTGACTCAGATGAGTACTGGGAATGCGCCATAATGCAGACTTCTATTACACTGGATCACCAGGTCGGCACTTGTAAAATGGCACCAACAGGAGATCCAACTGGAGTAGTTTCTCCTAGATTATTAGTACACGGTGTTAAAGGATTAAGAATAGCAGATGCCTCAATAATGCCACGAATTCCCGCATCTCACACTCACGCTCCAGTCGTAATGATAGCAGAGAAAGCTGCAGACATGATCAAGGAGGACTGGGGTTATTTAAATTAA
Protein
MRCVFLLLYVTAVRGLDANFFFDYWTDLFRPWPLNPKEGFVQDYTPKHREEFDFIVVGAGSAGCVIANRLTEVPQWKVLLIEAGGNENFFSDVPIFASFLSMTPMNWGYTSEPEPRACKDLRGKVCFLPRGKVLGGSSVLNFLIYQRGHPEDYNDWARMGNPGWSYDDILQYFKKSENIKIDELKNSSYHGRNGYLDIDHAPYKSPLEKVFRKAGEELGYEWRDPNGEHMMGFSKPQATMRNGRRCSSSKAFLEPVRFRRNLKVTKHTIVTKILIKPQTKTIYGVEFIKRNKRYRVLARREVILSAGTIGSAQLLMLSGVGPTEHLEKMGIRTLVDLPVGYNLQDHVTFSGNAFIVNDSRLCVNDLTAASPFSAASYMTGKGPLTLPGGAAGLAFIRTNVSNDSVASRPDMELVMGAGSLAGDFIGILRSLLGVTDKWFWKVYGTLPPKVRWRTFSLNPVLIRPRSVGRLMLRSSNFFDHPRIQPNYFSDLNDLKAMVQGVRMIENIIGTKAFQQYNTKLHDIPFPGCEHLIFDSDEYWECAIMQTSITLDHQVGTCKMAPTGDPTGVVSPRLLVHGVKGLRIADASIMPRIPASHTHAPVVMIAEKAADMIKEDWGYLN

Summary

Cofactor
FAD
Similarity
Belongs to the GMC oxidoreductase family.
EMBL
MF687603    ATJ44529.1    MF687549    ATJ44475.1    NWSH01000248    PCG78026.1    + More
RSAL01000230    RVE43855.1    KQ460367    KPJ15563.1    KQ459602    KPI93222.1    ODYU01008424    SOQ52008.1    AGBW02008520    OWR53111.1    JTDY01006729    KOB65745.1    CH479182    EDW33983.1    CM000070    EAL28302.2    KRT00640.1    CH902617    EDV42950.1    CM000160    EDW98646.1    CM000364    EDX14533.1    AE014297    AAF56574.1    CH964272    EDW85092.1    GAKP01018729    JAC40223.1    GAMC01007989    JAB98566.1    GBXI01008603    JAD05689.1    CH954182    EDV53564.1    CH933806    EDW15219.1    KRG01446.1    GDHF01011545    JAI40769.1    OUUW01000023    SPP89560.1    GDHF01031669    JAI20645.1    CH916369    EDV93702.1    NEVH01013984    PNF27957.1    CH940650    EDW67016.1    KRF83055.1    CP012526    ALC46725.1    KK853018    KDR12457.1    JRES01000664    KNC29439.1    JXUM01102122    JXUM01102123    JXUM01102124    JXUM01102125    KQ564702    KXJ71872.1    JXUM01056073    JXUM01056074    KQ561895    KXJ77234.1    CH477801    EAT36071.1    GEDC01024026    GEDC01011147    JAS13272.1    JAS26151.1    DS232197    EDS37178.1    AXCM01005241    KQ971358    KYB25985.1    AAAB01008859    EAA07534.5    UFQS01003210    UFQT01003210    SSX15360.1    SSX34732.1    ADMH02001672    ETN61477.1    UFQS01000097    UFQT01000097    SSW99382.1    SSX19762.1    APCN01000325    KK852802    KDR16287.1    AXCN02000005    ABLF02035756    ABLF02035762    NEVH01022362    PNF18879.1    AAZX01008029    KQ435704    KOX80305.1    GECU01009357    JAS98349.1    GGMR01009025    MBY21644.1    KY618825    AQW43011.1    GL448571    EFN84162.1    KQ980314    KYN16692.1    KZ288238    PBC31347.1    KK107261    EZA53937.1    GL888284    EGI63349.1    GFXV01003241    MBW15046.1    QOIP01000012    RLU16172.1    GFXV01005713    MBW17518.1    KQ434869    KZC09326.1    KQ759784    OAD62856.1    GFTR01007495    JAW08931.1    NEVH01019370    PNF22796.1    PNF22797.1    KQ981296    KYN43080.1    ACPB03007733    ACPB03007734    ACPB03007735    ACPB03007736    GEDC01006623    JAS30675.1    GECZ01024829    JAS44940.1    LBMM01005695    KMQ91287.1    KQ414579    KOC71127.1    ADTU01026685    GL442298    EFN63615.1    GL763984    EFZ18935.1    GBXI01010590    GBXI01000279    JAD03702.1    JAD14013.1    GAKP01019984    GAKP01019981    GAKP01019978    GAKP01019975    JAC38968.1    GAMC01007801    GAMC01007799    JAB98756.1    GBXI01017045    GBXI01016813    GBXI01008932    JAC97246.1    JAC97478.1    JAD05360.1    KZC09314.1    CH954180    EDV47075.1    GDHF01024877    GDHF01011981    JAI27437.1    JAI40333.1    CH477290    EAT44642.1   
Pfam
PF05199   GMC_oxred_C        + More
PF00732   GMC_oxred_N
Interpro
IPR000172   GMC_OxRdtase_N        + More
IPR007867   GMC_OxRtase_C       
IPR012132   GMC_OxRdtase       
IPR036188   FAD/NAD-bd_sf       
SUPFAM
SSF51905   SSF51905       
Gene 3D
PDB
5OC1     E-value=8.63031e-65,     Score=629

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.954286
 
 
Length:
620
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.970399999999999
Exp number, first 60 AAs:
0.65045
Total prob of N-in:
0.03851
outside
1  -  620
 
 

Population Genetic Test Statistics

Pi
175.833346
Theta
188.261247
Tajima's D
-0.80867
CLR
30.762
CSRT
0.172441377931103
Interpretation
Uncertain
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