Gene

KWMTBOMO08851

Annotation

PREDICTED:_T-complex-associated_testis-expressed_protein_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr15(+):6449718-6458958      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.411

CDS

ATGTTGAATTTACCAGAAAGTATCAGTAGAAGCACCTATTTTACTTATATGCAAAGTGAAAATTTAGAGCCAGCAAGAAAATTAAAATCAGAAAATTTTGATTGGGATGCTCAACATCCAAAATCCTTAGTTTCTATTTGCATTACTAAGTTAGCAGAGAGTTGGATTGGCTATCCGAAACTTGAGGAGCTCATAGCGAAAGACCGAGAATTGTTTTTACAGGTTTTAGATACCAATGTACCGCTGCAAATTTTAGCTGATAATATAAAAAGCAATATGTTTTGGAGAAAATGTTATTATTCCAAATGGATTGAGGCGCCCCTCGTATCCAAAGATAAGAAATGGATAAATATATTCATGGAAAAATATTATTCGGATATATTAGAAAATTTGAATCCTCGTCATTATGATCCAGAAAAGGTAACTACACTAGTGAAACTTTGTGGGCCTTATATACAAACACTTTCTATTAGAAGTCTAATTCCTTCAGATATTCCAATTCAAAGAATCACGTCACCGGAGATGGCAGATTTAGTTACAAGTCAAAGAAAAACTGAGACTAAAGTTCTACAAAAAAATAAAATCTGTAGAGATCATATTTCATTACACGCAGCTTTAGGAAGTTTGATAAATTTAGTAGAATTGCATATTACATATCAATTAAAGGCAACTGGAACTGATTATCGATGTGATCAATTTCAATTTACTAATAATGATGCAAAGAATCTTTCTCGTGGTTTGGAAAAATGTGCACTGTTGAGAATTCTCAGAATTACAAGGACTGATATGAATTGTCAAAAAGTCAAATATATCTTGCGAGGTCTCTCCGAAAAAGAACATTTGGAAACATTAGATTTTAGTCACTGTAAAATTGGCGACGATGGTGCAGCTTCAATCGCAAAATTCATTACAAGAAGTGACAATCTCAGAAATTTGAAGATAGCTGATAACATATTTGGTCCATTTGGTGCTGAAAGTATAGCCCATGCACTCAATAATTCTGGTTGCGGAATTCGAAGCTTAGATCTAAGCTTAAACACTAATTTAGGATCTGAAGGGATAGCACATATCGCTGTGTCGATAGCGAGAGGATGCAGTCTAACGGAATTGAATATATCTGGTTGTGGCATCAAGCCTGGGCCTTTAAAGAAGGCACCAATTGGAGTTTGGTCTGCAACAAGTGCAGAAAATCCACCAACATGCGGAGACTTACTGGCCCGAGCAATAGGTTTGGTAAAAACGCCTTTAAGGTCTTTGGATATTAGCGTGAACAATATTGGGACGCCGAGTGATAACACTCTCTCGAACGCTATTTGTCTAAGTTATATTACGGACGTTAATTTAAAAAGATCGGGTATGGTACCTCTATCAATGGCTATAGCTGAATCAGCAGCAGCAGCTCAGAGACTACGAAAAGAGGCCGAAAAGGGTATAAAATTCAGAAGAAGTGCTGGCAGGGTCTTACAAGCTCGGAGAGTTGCAAAAGGAATGAATATTGATGCGGATCCCATTTTGCTAGCTCAACAATTATCAGCTCGACCTTCTATAGTATCAGTAGCTTCAGAAGAAGGAGTTTACAATATTCAAACACAGCCCTTGCCTACAGACTTTGGCTTTGTTCCTGCGTTCAAGAGTCCGTTGCCATCTTCTCGTGCTTCGTCCATAACAGGGCCACCAACATCACGACGTTCAAGTCATCATATTATTTTAGAACCAGTGAAGGAAGTGCGACGTACTGCTTTAATTCGACGTGGGTCTGATGGATCTTTATTACAGCCACGTAGTAACGAGGATAACGAAAGACATATCAAGATTTTTGTGTCTTAA

Protein

MLNLPESISRSTYFTYMQSENLEPARKLKSENFDWDAQHPKSLVSICITKLAESWIGYPKLEELIAKDRELFLQVLDTNVPLQILADNIKSNMFWRKCYYSKWIEAPLVSKDKKWINIFMEKYYSDILENLNPRHYDPEKVTTLVKLCGPYIQTLSIRSLIPSDIPIQRITSPEMADLVTSQRKTETKVLQKNKICRDHISLHAALGSLINLVELHITYQLKATGTDYRCDQFQFTNNDAKNLSRGLEKCALLRILRITRTDMNCQKVKYILRGLSEKEHLETLDFSHCKIGDDGAASIAKFITRSDNLRNLKIADNIFGPFGAESIAHALNNSGCGIRSLDLSLNTNLGSEGIAHIAVSIARGCSLTELNISGCGIKPGPLKKAPIGVWSATSAENPPTCGDLLARAIGLVKTPLRSLDISVNNIGTPSDNTLSNAICLSYITDVNLKRSGMVPLSMAIAESAAAAQRLRKEAEKGIKFRRSAGRVLQARRVAKGMNIDADPILLAQQLSARPSIVSVASEEGVYNIQTQPLPTDFGFVPAFKSPLPSSRASSITGPPTSRRSSHHIILEPVKEVRRTALIRRGSDGSLLQPRSNEDNERHIKIFVS

Uniprot

A0A2H1WIQ8   A0A194PS34   A0A0L7L8G1   A0A2A4JB75   A0A3S2THY3   A0A212F4C9   + More
A0A2J7R5R2   A0A3Q4N7N1   A0A0J7L1F5   A0A0L7RCE7   A0A3B4H8W9   A0A182MM63   A0A3Q0RZM7   A0A3Q2VW53   A0A3Q4HY72   H3DG47   A0A151X5H6   A0A2A4K2H5   A0A151I165   A0A2W1BTS7   A0A158NAV5   A0A195EVN6   A0A310SCG2   A0A3B4HB40   A0A0L7LMM0   A0A212EX19   A0A195CK12   A0A3Q2VW23   A0A0C9RTX1   A0A3S2NTI4   A0A3L8DF33   H9J2C5   A0A3P9ME70   H2M8X6   A0A2H1VHP9   F4X233   A0A3B4HB95   A0A3P8R2J5   A0A3P9AVC4   A0A3Q2VWR8   A0A067R9S9   A0A3Q1GPH5  

Pubmed

26354079    26227816    22118469    25186727    15496914    28756777    + More
21347285    30249741    19121390    17554307    21719571    24845553   

EMBL

ODYU01008934    SOQ52955.1    KQ459596    KPI95564.1    JTDY01002365    KOB71571.1    + More
NWSH01002160    PCG69016.1    RSAL01000127    RVE46528.1    AGBW02010386    OWR48587.1    NEVH01006990    PNF36174.1    LBMM01001441    KMQ96319.1    KQ414616    KOC68411.1    AXCM01000804    KQ982519    KYQ55518.1    NWSH01000238    PCG78104.1    KQ976600    KYM79451.1    KZ149903    PZC78419.1    ADTU01010303    ADTU01010304    ADTU01010305    ADTU01010306    KQ981954    KYN32206.1    KQ769179    OAD52963.1    JTDY01000526    KOB76803.1    AGBW02011843    OWR46046.1    KQ977642    KYN01070.1    GBYB01011031    JAG80798.1    RSAL01000089    RVE48149.1    QOIP01000009    RLU19080.1    BABH01007703    ODYU01002619    SOQ40355.1    GL888565    EGI59449.1    KK852832    KDR15318.1   

Proteomes

UP000053268    UP000037510    UP000218220    UP000283053    UP000007151    UP000235965    + More
UP000261580    UP000036403    UP000053825    UP000261460    UP000075883    UP000261340    UP000264840    UP000007303    UP000075809    UP000078540    UP000005205    UP000078541    UP000078542    UP000279307    UP000005204    UP000265180    UP000001038    UP000007755    UP000265100    UP000265160    UP000027135    UP000257200   

PRIDE

H9J2C5   

Pfam

PF13516   LRR_6

Interpro

IPR032675   LRR_dom_sf        + More
IPR001611   Leu-rich_rpt       

Gene 3D

3.80.10.10    

ProteinModelPortal

A0A2H1WIQ8   A0A194PS34   A0A0L7L8G1   A0A2A4JB75   A0A3S2THY3   A0A212F4C9   + More
A0A2J7R5R2   A0A3Q4N7N1   A0A0J7L1F5   A0A0L7RCE7   A0A3B4H8W9   A0A182MM63   A0A3Q0RZM7   A0A3Q2VW53   A0A3Q4HY72   H3DG47   A0A151X5H6   A0A2A4K2H5   A0A151I165   A0A2W1BTS7   A0A158NAV5   A0A195EVN6   A0A310SCG2   A0A3B4HB40   A0A0L7LMM0   A0A212EX19   A0A195CK12   A0A3Q2VW23   A0A0C9RTX1   A0A3S2NTI4   A0A3L8DF33   H9J2C5   A0A3P9ME70   H2M8X6   A0A2H1VHP9   F4X233   A0A3B4HB95   A0A3P8R2J5   A0A3P9AVC4   A0A3Q2VWR8   A0A067R9S9   A0A3Q1GPH5  

PDB

4R5D     E-value=7.94633e-08,     Score=137

KEGG

101736012    no KO assigned | (RefSeq) T-complex-associated testis-expressed protein 1

GO

GO:0005515   GO:0016311   GO:0016791   GO:0008270   GO:0015074   GO:0016817   GO:0043565   GO:0016876   GO:0043039  

Length:

608

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.01456

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.00088

outside

1  -  608

 

 

Pi

16.70586

Theta

125.732324

Tajima's D

0

CLR

0.121337

CSRT

0.368231588420579

Interpretation

Uncertain