SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08850
Pre Gene Modal
BGIBMGA007847
Annotation
PREDICTED:_myotubularin-related_protein_2_[Bombyx_mori]
Location in the cell
Mitochondrial   Reliability : 1.31 Nuclear   Reliability : 1.551
 

Sequence

CDS
ATGGATAAACATAACAGTTCAGAACTATTAAGTTCCGACTTTTCGCTATCCAAGAATGCAAGTTCTGATTCATTGGATTCTGATTCTAAATCAAGTTCTTTGAATTCTAAACACGGACAGGACTCCCCCCATGTCCTCGGAGATATACAGCTGTTGGATGGTGAAAAGGTTACAAGTGTAGCTCGTGATGTAACTTATTTGTGCCCATACAGTGGACCAACGAGGGGAGTCCTGAAAGTGACAAACTATCAACTTCACTTTAGACCAACTGATCCTAGTGCTACTCTAGGTACATTGAGTGTGCCACTGGGGGTTGTTTCTCGAATTGAAAAAGTTGGTGGTGCTTCTTCCAAAGGTGAAAACTCATATGGAATAGAAATTTTTTGTAAGGATATGAGGAACTTAAGATTTGCACACAGACAAGAGAATCATTCACGTCGTGGTATATTTGAAAAACTGCAGCAGCTAGCTTTTCCTCTGTCACACCGACTTCCGATGTTTGCATTCAGTTATTCTGAAAGTTTCCCTGAAGATGGTTGGCATGTGTATGAACCCATTGCTGAGCTGAGACGAATGGGTGTAAGCAATGACATGTGGCGCATAACACGAATAAACGATAAGTATGAAGTGTGTGATAGCTATCCGTCTATATGGGCAGTCCCTTCTGCAGCTGATGATGATTTACTACGATCAGTGGCAACATTTAGATCACGTGGCCGCATTCCTGTACTATCCTGGATTCATCCTAACTCCCAAGCTACAATAACCAGGTGCAGTCAACCGTTAGTTGGGGTAAGCGGCAAGCGAAGTCGTGAAGATGAAAGGTACATTCAACTAATTATGGATGCAAATGCCCAGGCTCATAAACTTTTCATCATGGATGCTCGTCCCACTGCTAATGCTGTCGCCAATAAAGCCAAAGGAGGAGGTTACGAGTCTGAAGACGCGTATCAGAATGCGGATCTGGTGTTCTTGGACATTCATAACATTCACGTCATGAGAGAAAGCTTACGGAAACTAAAGGAATTATGCTTTCCACAGATTGATCAATCCAAATGGTTCAGCGGAATAGAAGCCAGCTGTTGGCTGAAGCACATCAAATGTATTCTGGCTGGTGCTGTCCGTATTGTTGATAAGGTTGAGAATCATAAGACGTCGGTGCTCGTGCATTGTTCGGATGGCTGGGACCGCACGGCTCAACTGACGGCGCTGTCGATGTTAATGCTCGACCCTTACTACAGAACACTTCGAGGATTCCAAGTTCTAATAGAAAAGGAGTGGTTATCTTTTGGACATAAATTTCAATTGCGCATCGGGCACGGCGACGAGCGACACTCGGACGCGGACCGCTCGCCCGTGTTCGTGCAGTGGGTGGACTGCGTGTGGCAGCTGCAGCAGCAGTTCCCGACGGCGTTCGAATTCACAGAACGACTCCTAATAACTATAGTCGATCACCTATATTCGTGTCGCTTCGGAACCTTCCTGTTCAATACTGAACGGGAAAGGGTAAAGGAAGAAGTGAAGACTAAGACCGTATCTCTATGGTCTTATATAAATAGTCGTCAAGATTTGTATTTGAATGCGCTTTACTGGGGCTCGTCGTCCGGCGCCACGTCGCCCTCCTCGCCGTACTCGAGGCCTCCCGTCGTGCTAGTTCCTGTCGCTTCATTAAGGGTCATCAAACTGTGGAAAGCGCTGTACTGCAGATGGAACCCAATAATGAGGCAGCAGGATCCGATATACCAAAGATCACGTGAGCTGGTGGCTCTCCGCGCGCAGCTGGAGGCGGCGGTGGCGGCGGCCGCCGGGGACCACGCCGCCAAGCAACACCGCCGCGGCCTCACGCCGCCCAGGGTCGCCAGCCCGCACCATGTCTGA
Protein
MDKHNSSELLSSDFSLSKNASSDSLDSDSKSSSLNSKHGQDSPHVLGDIQLLDGEKVTSVARDVTYLCPYSGPTRGVLKVTNYQLHFRPTDPSATLGTLSVPLGVVSRIEKVGGASSKGENSYGIEIFCKDMRNLRFAHRQENHSRRGIFEKLQQLAFPLSHRLPMFAFSYSESFPEDGWHVYEPIAELRRMGVSNDMWRITRINDKYEVCDSYPSIWAVPSAADDDLLRSVATFRSRGRIPVLSWIHPNSQATITRCSQPLVGVSGKRSREDERYIQLIMDANAQAHKLFIMDARPTANAVANKAKGGGYESEDAYQNADLVFLDIHNIHVMRESLRKLKELCFPQIDQSKWFSGIEASCWLKHIKCILAGAVRIVDKVENHKTSVLVHCSDGWDRTAQLTALSMLMLDPYYRTLRGFQVLIEKEWLSFGHKFQLRIGHGDERHSDADRSPVFVQWVDCVWQLQQQFPTAFEFTERLLITIVDHLYSCRFGTFLFNTERERVKEEVKTKTVSLWSYINSRQDLYLNALYWGSSSGATSPSSPYSRPPVVLVPVASLRVIKLWKALYCRWNPIMRQQDPIYQRSRELVALRAQLEAAVAAAAGDHAAKQHRRGLTPPRVASPHHV

Summary

EMBL
ODYU01008934    SOQ52954.1    NWSH01002160    PCG69018.1    KQ460367    KPJ15569.1    + More
RSAL01000249    RVE43495.1    NEVH01019421    PNF22378.1    KQ976885    KYN07509.1    KK852703    KDR18081.1    KK107154    EZA56848.1    QOIP01000001    RLU27558.1    GEBQ01006141    JAT33836.1    GEBQ01020750    JAT19227.1    KQ971312    EEZ98113.2    GBYB01002042    JAG71809.1    GBYB01001790    GBYB01002043    JAG71557.1    JAG71810.1    GBYB01001780    JAG71547.1    KQ980824    KYN12524.1    KQ976419    KYM89268.1    ADTU01023417    NNAY01000927    OXU25860.1    KQ982021    KYN30587.1    ACPB03005173    LJIG01022876    KRT78277.1    GL435030    EFN74221.1    KQ982335    KYQ57547.1    GL446605    EFN87513.1    GEDC01029504    GEDC01023686    JAS07794.1    JAS13612.1    GEDC01020921    GEDC01009377    JAS16377.1    JAS27921.1    KZ288256    PBC30603.1    GEZM01078343    JAV62760.1    GDKW01001265    JAI55330.1    KQ760132    OAD61801.1    KQ414654    KOC66019.1    APGK01052521    APGK01052522    KB741213    ENN72599.1    BT128446    AEE63403.1    GECZ01015952    JAS53817.1    GBGD01000859    JAC88030.1    GECU01026144    GECU01002689    JAS81562.1    JAT05018.1    GBYB01014977    JAG84744.1    GECU01027543    GECU01014113    JAS80163.1    JAS93593.1    GGMS01016473    MBY85676.1    GECL01001806    JAP04318.1    GFXV01000071    MBW11876.1    ABLF02039071    KQ435712    KOX79357.1    KQ434923    KZC11486.1    LBMM01000464    KMQ98275.1    DS235171    EEB12905.1    GAIX01004484    JAA88076.1    AJVK01010231    GBHO01016137    GBHO01016136    GBHO01016133    GBHO01005438    GBRD01008408    JAG27467.1    JAG27468.1    JAG27471.1    JAG38166.1    JAG57413.1    GFDF01002404    JAV11680.1    JH431669    JXUM01103444    KQ564805    KXJ71726.1    GDUN01000683    JAN95236.1    GDIP01095846    JAM07869.1    GDIP01149841    GDIQ01035029    LRGB01000005    JAJ73561.1    JAN59708.1    KZS22012.1    GGFK01006964    MBW40285.1    GFDL01001615    JAV33430.1    GGFK01006899    MBW40220.1    GDIP01214080    JAJ09322.1    AXCN02002502    UFQS01000093    UFQT01000093    SSW99222.1    SSX19602.1    AAAB01008839    AAAB01008980    APCN01004541    EAA14432.3    ATLV01020113    KE525294    KFB44856.1    ADMH02002162    ETN58165.1    GDIQ01019032    JAN75705.1    GECZ01026257    JAS43512.1    AMQN01006822    KB299236    ELU08223.1    AXCM01004598    KA648128    AFP62757.1    JRES01000699    KNC29075.1    GAKP01023438    JAC35520.1    GDHF01021234    JAI31080.1    JXJN01023173    GAMC01006727    JAB99828.1    GDIQ01070204    JAN24533.1    CVRI01000001    CRK86447.1    CCAG010007366    GBXI01008555    JAD05737.1   
Pfam
PF02893   GRAM        + More
PF06602   Myotub-related
PF12578   3-PAP
Interpro
IPR004182   GRAM        + More
IPR003595   Tyr_Pase_cat       
IPR011993   PH-like_dom_sf       
IPR016130   Tyr_Pase_AS       
IPR010569   Myotubularin-like_Pase_dom       
IPR030564   Myotubularin_fam       
IPR029021   Prot-tyrosine_phosphatase-like       
IPR022587   MTMR12-like_C       
IPR000387   TYR_PHOSPHATASE_dom       
SUPFAM
SSF52799   SSF52799       
Gene 3D
PDB
1M7R     E-value=0,     Score=1799

Ontologies

Topology

Length:
625
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01295
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00031
outside
1  -  625
 
 

Population Genetic Test Statistics

Pi
207.131327
Theta
18.289912
Tajima's D
-1.390869
CLR
1407.541808
CSRT
0.0751462426878656
Interpretation
Uncertain
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