Gene

KWMTBOMO08829  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007862

Annotation

ubiquitin-conjugating_enzyme_E2M_[Bombyx_mori]

Location

Bomo_Chr15(-):6046043-6049901      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.768 Nuclear   Reliability : 2.318

CDS

ATGATTAAACTTTTTTCATTAAAACAACAGAAAAAAGATGAAGAGGGTTCTACCAGAGGAGGAGGATCACAAAAAAAAGCATCAGCAGCCCAATTACGAATTACAAAAGATTTGAATGAATTGAATCTACCGAAAACATGCAACACAGAATTCCCTGATCCGGATGACCTATTGAATTTTAAATTGATTATATGCCCAGATGAAGGATTTTATAGAGGAGGAAAATTTGTATTTAGCTTTAAGGTAGGACCAAATTATCCTCACGAGCCGCCCAAAGTCAAATGTGAAACAGCAGTTTATCATCCTAACATAGACCTCGAAGGCAACGTGTGCCTGAATATACTCAGGGAAGATTGGAAACCTGTTCTCACAGTTAACTCCATAGTGTACGGTCTCCAGTATTTATTCTTGGAACCAAACCCTGAAGATCCCCTCAACAAGGAAGCAGCTGACGAGCTCCAAAGCAACAGGCGACTTTTCGAACAACACGTTCAGAGAGCTATGCGAGGCGGCTACGTCGGCACATCTTATTTCGAACGATGCCTCAAATGA

Protein

MIKLFSLKQQKKDEEGSTRGGGSQKKASAAQLRITKDLNELNLPKTCNTEFPDPDDLLNFKLIICPDEGFYRGGKFVFSFKVGPNYPHEPPKVKCETAVYHPNIDLEGNVCLNILREDWKPVLTVNSIVYGLQYLFLEPNPEDPLNKEAADELQSNRRLFEQHVQRAMRGGYVGTSYFERCLK

Similarity

Belongs to the ubiquitin-conjugating enzyme family.

Uniprot

Q2F5S2   A0A2W1BE51   A0A2A4JIC0   A0A2H1WL78   A0A212FF38   A0A194QP28   + More
A0A1E1WRB2   A0A437AZA7   S4PB10   A0A194PQF4   I4DPU1   A0A067RPT6   A0A2P8XUS3   A0A1S3DDN0   T1J130   A0A1B6KFI2   A0A1B6DLW4   A0A2J7QEH4   A0A0A9Z2Q8   A0A1B6GMJ4   A0A1B6J6K1   A0A0P4VLB9   A0A0V0G5U5   A0A023F4W4   A0A069DNV5   D6WE54   A0A1Y1KAX5   E2B4U4   A0A224XLP6   A0A1W4XER7   E2A3H3   A0A026W226   A0A023EIJ3   A0A182N8C5   A0A182QNS0   A0A182M9Q7   A0A182RF06   A0A182Y2V1   A0A182JP48   A0A182T508   A0A195C900   A0A2A3E7T6   V9IIQ0   A0A088ABX5   A0A182P6D4   E0W1Q5   A0A151WTX4   A0A0T6AY32   A0A1A9XJW1   A0A1A9UKQ3   A0A1B0C6P2   A0A1A9ZDW9   D3TNP3   T1DP07   A0A2M3Z6D2   W5JKG6   A0A182FD64   A0A2M4AQH3   A0A131XJQ7   A0A195DS07   A0A195BS64   A0A195EX99   A0A158NUN0   A0A1A9WLL8   A0A182VLB0   A0A182TU11   A0A182KPR1   Q7Q6C9   A0A182I206   I3NDF0   A0A1U7RG31   A0A250YBI6   D3ZNQ6   A0A2K6BGF5   A0A2K6KDG1   G1TC10   A0A2K5VQS3   G3RC12   A0A2K5YAS0   A0A287BNE4   A0A0D9S6F2   A0A452EWN3   A0A340XEU3   A0A2K5CC13   A0A2Y9FHG2   A0A2K6NJ64   M3W0W9   A0A2U3YVU4   A0A2K5LBH6   H0WSH0   A0A2Y9MHW8   A0A2U3WBF1   A0A2K5JNT3   A0A2K5RWM1   A0A383ZKR0   A0A2K6GWV2   A0A2F0B976   A0A3Q7V8D3   H2P0H9   A0A2Y9HCT7  

Pubmed

28756777    22118469    26354079    23622113    22651552    24845553    + More
29403074    25401762    26823975    27129103    25474469    26334808    18362917    19820115    28004739    20798317    24508170    30249741    24945155    26483478    25244985    20566863    20353571    20920257    23761445    28049606    21347285    20966253    12364791    14747013    17210077    28087693    15057822    15632090    21993624    25362486    17975172   

EMBL

DQ311351    ABD36295.1    KZ150220    PZC72105.1    NWSH01001283    PCG71845.1    + More
ODYU01009393    SOQ53788.1    AGBW02008873    OWR52317.1    KQ461195    KPJ06730.1    GDQN01001489    JAT89565.1    RSAL01000249    RVE43517.1    GAIX01008460    JAA84100.1    KQ459596    KPI95542.1    AK403780    BAM19931.1    KK852542    KDR21734.1    PYGN01001314    PSN35750.1    JH431752    GEBQ01030033    JAT09944.1    GEDC01010633    JAS26665.1    NEVH01015312    PNF26999.1    GBHO01005453    GBRD01014406    GDHC01013737    JAG38151.1    JAG51420.1    JAQ04892.1    GECZ01006111    JAS63658.1    GECU01012910    JAS94796.1    GDKW01000694    JAI55901.1    GECL01002699    JAP03425.1    GBBI01002191    JAC16521.1    GBGD01003141    JAC85748.1    KQ971318    EFA00388.1    GEZM01087529    JAV58643.1    GL445642    EFN89290.1    GFTR01003029    JAW13397.1    GL436428    EFN72037.1    KK107485    QOIP01000006    EZA50125.1    RLU21266.1    JXUM01120452    JXUM01120453    JXUM01120454    JXUM01120455    JXUM01120460    JXUM01120461    JXUM01120462    GAPW01004837    KQ566394    JAC08761.1    KXJ70161.1    KXJ70165.1    AXCN02002335    AXCM01000891    KQ978164    KYM96646.1    KZ288338    PBC27823.1    JR047803    AEY60512.1    DS235873    EEB19637.1    KQ982745    KYQ51369.1    LJIG01022529    KRT80095.1    JXJN01026846    CCAG010012769    EZ423045    ADD19321.1    GAMD01002385    JAA99205.1    GGFM01003331    MBW24082.1    ADMH02001182    GGFL01004432    ETN63803.1    MBW68610.1    GGFK01009702    MBW43023.1    GEFH01002221    JAP66360.1    KQ980530    KYN15633.1    KQ976417    KYM89860.1    KQ981953    KYN32527.1    ADTU01026626    AAAB01008960    EAA11931.2    APCN01000103    AGTP01123227    GFFW01003879    JAV40909.1    AABR07002063    CH474090    EDL75755.1    AQIA01036882    CABD030115168    AEMK02000043    AQIB01135103    LWLT01000020    AANG04003316    AAQR03119249    NTJE010107368    MBV99556.1    ABGA01058584    ABGA01280720    NDHI03003661    PNJ10826.1   

Proteomes

UP000218220    UP000007151    UP000053240    UP000283053    UP000053268    UP000027135    + More
UP000245037    UP000079169    UP000235965    UP000007266    UP000008237    UP000192223    UP000000311    UP000053097    UP000279307    UP000069940    UP000249989    UP000075884    UP000075886    UP000075883    UP000075900    UP000076408    UP000075881    UP000075901    UP000078542    UP000242457    UP000005203    UP000075885    UP000009046    UP000075809    UP000092443    UP000078200    UP000092460    UP000092445    UP000092444    UP000000673    UP000069272    UP000078492    UP000078540    UP000078541    UP000005205    UP000091820    UP000075903    UP000075902    UP000075882    UP000007062    UP000075840    UP000005215    UP000189706    UP000002494    UP000233120    UP000233180    UP000001811    UP000233100    UP000001519    UP000233140    UP000008227    UP000029965    UP000291000    UP000265300    UP000233020    UP000248484    UP000233200    UP000011712    UP000245341    UP000233060    UP000005225    UP000248483    UP000245340    UP000233080    UP000233040    UP000261681    UP000233160    UP000286642    UP000001595    UP000248481   

PRIDE

Q2F5S2    D3ZNQ6   

Pfam

PF00179   UQ_con

Interpro

IPR000608   UBQ-conjugat_E2        + More
IPR016135   UBQ-conjugating_enzyme/RWD       
IPR023313   UBQ-conjugating_AS       

SUPFAM

SSF54495   SSF54495       

Gene 3D

3.10.110.10    

CDD

cd00195  UBCc

ProteinModelPortal

Q2F5S2   A0A2W1BE51   A0A2A4JIC0   A0A2H1WL78   A0A212FF38   A0A194QP28   + More
A0A1E1WRB2   A0A437AZA7   S4PB10   A0A194PQF4   I4DPU1   A0A067RPT6   A0A2P8XUS3   A0A1S3DDN0   T1J130   A0A1B6KFI2   A0A1B6DLW4   A0A2J7QEH4   A0A0A9Z2Q8   A0A1B6GMJ4   A0A1B6J6K1   A0A0P4VLB9   A0A0V0G5U5   A0A023F4W4   A0A069DNV5   D6WE54   A0A1Y1KAX5   E2B4U4   A0A224XLP6   A0A1W4XER7   E2A3H3   A0A026W226   A0A023EIJ3   A0A182N8C5   A0A182QNS0   A0A182M9Q7   A0A182RF06   A0A182Y2V1   A0A182JP48   A0A182T508   A0A195C900   A0A2A3E7T6   V9IIQ0   A0A088ABX5   A0A182P6D4   E0W1Q5   A0A151WTX4   A0A0T6AY32   A0A1A9XJW1   A0A1A9UKQ3   A0A1B0C6P2   A0A1A9ZDW9   D3TNP3   T1DP07   A0A2M3Z6D2   W5JKG6   A0A182FD64   A0A2M4AQH3   A0A131XJQ7   A0A195DS07   A0A195BS64   A0A195EX99   A0A158NUN0   A0A1A9WLL8   A0A182VLB0   A0A182TU11   A0A182KPR1   Q7Q6C9   A0A182I206   I3NDF0   A0A1U7RG31   A0A250YBI6   D3ZNQ6   A0A2K6BGF5   A0A2K6KDG1   G1TC10   A0A2K5VQS3   G3RC12   A0A2K5YAS0   A0A287BNE4   A0A0D9S6F2   A0A452EWN3   A0A340XEU3   A0A2K5CC13   A0A2Y9FHG2   A0A2K6NJ64   M3W0W9   A0A2U3YVU4   A0A2K5LBH6   H0WSH0   A0A2Y9MHW8   A0A2U3WBF1   A0A2K5JNT3   A0A2K5RWM1   A0A383ZKR0   A0A2K6GWV2   A0A2F0B976   A0A3Q7V8D3   H2P0H9   A0A2Y9HCT7  

PDB

4P5O     E-value=7.79133e-86,     Score=804

KEGG

692934    K10579 ubiquitin-conjugating enzyme E2 M | (RefSeq) ubiquitin-conjugating enzyme E2M

PATHWAY

04120    Ubiquitin mediated proteolysis - Bombyx mori (domestic silkworm)

GO

GO:0005524   GO:0016740   GO:0016874   GO:0045116   GO:0019788   GO:0004842   GO:0043525  

Length:

183

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00962

Exp number, first 60 AAs:

0

Total prob of N-in:

0.08756

outside

1  -  183

 

 

Pi

242.346357

Theta

197.847868

Tajima's D

0.493435

CLR

0.69281

CSRT

0.513574321283936

Interpretation

Uncertain