Gene

KWMTBOMO08823

Pre Gene Modal

BGIBMGA007866

Annotation

PREDICTED:_general_transcription_factor_3C_polypeptide_6-like_isoform_X4_[Papilio_machaon]

Location

Bomo_Chr15(-):5961572-5964681      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.978

CDS

ATGGAAAATGATGCACTAGATGATTGTGAGGAAGAAATTTTGGTGTATCTTGAATTCAAGGACAGTGTTAATATCGAAAAATACAGAAATATTCACATATTGGGTATTGATAGTAAAAATCCAATTGTACAAATGGATGATACTTTCTATATTGGAAAGTATGACAACCCTTTTGGTACATATTTGTTTTTTGAAGAAGATCCATCACCGAATACTGATGACCCACTGTTTGATAGATTGTCTGAAAAAAATTTAAAATACGTTTGCAAAACAAGAAAATGTATACAGATGCAACATGCTTATGTGTCTCCTAAGGAGGGTGAAGACTGTGTACCTGGCAATCAATCCAACAAAATAGATGATGACGTAAAGGCTGTCAATTTTAAAACCGTTCAAGAAGCAATAAATACATTTAAAACTGAATACCGAGATAAAACACTAGAACCAATTTTAATAGATTAA

Protein

MENDALDDCEEEILVYLEFKDSVNIEKYRNIHILGIDSKNPIVQMDDTFYIGKYDNPFGTYLFFEEDPSPNTDDPLFDRLSEKNLKYVCKTRKCIQMQHAYVSPKEGEDCVPGNQSNKIDDDVKAVNFKTVQEAINTFKTEYRDKTLEPILID

Uniprot

H9JEB9   A0A2A4J4Z6   A0A2H1VKC5   A0A194QP23   A0A194PQ13   A0A212FEC9   + More
A0A3S2LS88   A0A195F9B0   F4WFG1   A0A158NCK8   A0A195BWN4   A0A195EMU8   A0A151X5V8   A0A195CQC3   A0A026WK73   A0A0K8TKS1   E9IMA8   K7JLJ7   A0A232FAZ5   A0A0N0BBN3   A0A0N7Z8D9   T1IDV7   A0A2A3E1R5   E2AK82   A0A182FQM3   A0A182JGJ6   A0A1B0DE19   A0A2M4C0G2   A0A0L7R4Z7   T1EAS7   A0A0A9XDJ8   A0A1B6G3Q5   A0A310SQ05   A0A154P7C0   A0A1B6FX99   A0A084VRT9   A0A0V0GCF5   B4P2N7   A0A1B6KUK7   A0A1W4W9T6   A0A3B0JRC5   A0A0Q5WCF9   A0A1B6I6Y9   A0A0J9TW14   B4HRK1   B4QFB2   B4QFB1   E1JH07   A0A0J7L4Y5   K7G730   B4LJM7   B4NMR1   K7G725  

Pubmed

19121390    26354079    22118469    21719571    21347285    24508170    + More
30249741    26369729    21282665    20075255    28648823    27129103    20798317    25401762    26823975    24438588    17994087    17550304    22936249    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17381049   

EMBL

BABH01002861    BABH01002862    BABH01002863    NWSH01002960    PCG67217.1    ODYU01003012    + More
SOQ41241.1    KQ461195    KPJ06725.1    KQ459596    KPI95536.1    AGBW02008937    OWR52125.1    RSAL01000266    RVE43273.1    KQ981727    KYN36966.1    GL888115    EGI67212.1    ADTU01011954    KQ976396    KYM92992.1    KQ978691    KYN29209.1    KQ982490    KYQ55793.1    KQ977408    KYN02948.1    KK107167    QOIP01000010    EZA56373.1    RLU18058.1    GDAI01002631    JAI14972.1    GL764129    EFZ18440.1    NNAY01000571    OXU27618.1    KQ435989    KOX67688.1    GDKW01003619    JAI52976.1    ACPB03003540    KZ288445    PBC25637.1    GL440194    EFN66186.1    AJVK01032455    GGFJ01009603    MBW58744.1    KQ414654    KOC65918.1    GAMD01000778    JAB00813.1    GBHO01028462    GBHO01028461    GBHO01028460    GBHO01028459    GBRD01002488    GBRD01002487    GDHC01019061    JAG15142.1    JAG15143.1    JAG15144.1    JAG15145.1    JAG63333.1    JAP99567.1    GECZ01012705    GECZ01000078    JAS57064.1    JAS69691.1    KQ761783    OAD57033.1    KQ434831    KZC07836.1    GECZ01014990    JAS54779.1    ATLV01015779    KE525036    KFB40683.1    GECL01000623    JAP05501.1    CM000157    EDW89298.1    GEBQ01024864    JAT15113.1    OUUW01000001    SPP75231.1    CH954177    KQS70884.1    GECU01025014    JAS82692.1    CM002911    KMY92200.1    CH480816    EDW46883.1    CM000362    EDX06141.1    EDX06140.1    AE013599    AY119595    ACZ94365.1    AGK45250.1    LBMM01000739    KMQ97598.1    AGCU01087877    CH940648    EDW61595.1    CH964282    EDW85650.2   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000283053    + More
UP000078541    UP000007755    UP000005205    UP000078540    UP000078492    UP000075809    UP000078542    UP000053097    UP000279307    UP000002358    UP000215335    UP000053105    UP000015103    UP000242457    UP000000311    UP000069272    UP000075880    UP000092462    UP000053825    UP000076502    UP000030765    UP000002282    UP000192221    UP000268350    UP000008711    UP000001292    UP000000304    UP000000803    UP000036403    UP000007267    UP000008792    UP000007798   

PRIDE

H9JEB9   

Pfam

PF10419   TFIIIC_sub6        + More
PF03281   Mab-21

Interpro

IPR024810   Mab-21_dom        + More
IPR019481   TFIIIC_triple_barrel       

ProteinModelPortal

H9JEB9   A0A2A4J4Z6   A0A2H1VKC5   A0A194QP23   A0A194PQ13   A0A212FEC9   + More
A0A3S2LS88   A0A195F9B0   F4WFG1   A0A158NCK8   A0A195BWN4   A0A195EMU8   A0A151X5V8   A0A195CQC3   A0A026WK73   A0A0K8TKS1   E9IMA8   K7JLJ7   A0A232FAZ5   A0A0N0BBN3   A0A0N7Z8D9   T1IDV7   A0A2A3E1R5   E2AK82   A0A182FQM3   A0A182JGJ6   A0A1B0DE19   A0A2M4C0G2   A0A0L7R4Z7   T1EAS7   A0A0A9XDJ8   A0A1B6G3Q5   A0A310SQ05   A0A154P7C0   A0A1B6FX99   A0A084VRT9   A0A0V0GCF5   B4P2N7   A0A1B6KUK7   A0A1W4W9T6   A0A3B0JRC5   A0A0Q5WCF9   A0A1B6I6Y9   A0A0J9TW14   B4HRK1   B4QFB2   B4QFB1   E1JH07   A0A0J7L4Y5   K7G730   B4LJM7   B4NMR1   K7G725  

KEGG

101745913    K15203 general transcription factor 3C polypeptide 6 | (RefSeq) general transcription factor 3C poly

GO

GO:0000127   GO:0016604   GO:0003677   GO:0006383  

Length:

153

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.14886

outside

1  -  153

 

 

Pi

180.399684

Theta

134.091003

Tajima's D

0.657882

CLR

0.079189

CSRT

0.55897205139743

Interpretation

Uncertain