SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08819  Validated by peptides from experiments
Annotation
PREDICTED:_uncharacterized_protein_LOC106129322_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.16
 

Sequence

CDS
ATGCCTTCATGGATTGTCAAAATACCACTATTATTGATTTTATTGATACAACATACAATTCCGATGGCTATGCTGCAAAAACCTTCATATTTTTCATCATATGATTCGAATAGTGACCTAGAAGAATACATGAAAACTAAAAGCTATATTCCAAACGAAGAAAATTTACCGAAAATGCCTTCAGCAGTCACTTATTCAGGTACTGATTCAAGCTACGTGTTATCAAAATTGACAGACGAAGAATTGTATAATCTCTTAAATTCACAACCAAAGAAAAGTGAATATGGATTAAGTGATTTAATTAAAGTTGGATATAATGCAGACCGAGATGCACCTAAATATTTTGTTAAACAGAAAGAAGATGTTGATTTCAAAAGCAAAATTGCCAAATTACCTCAAAATCATTTATATGATAAAAGAATTGACAATCAAAATGCAGTCTACAGATTGCAGAACAGGGAAATCGTAAATGCGGCTGATGATCGAAATTATCCAGCGGTTAAGAAATTAACTGAATTACTAAACAATAATGTTCGTGGATGGTACGACGACGAATTTTCTGGAATTGGGGGTGATAAAAAAAGAGACTTACTATTTAATATTTTAGTTGCTGAGTTGAGGTCACTGTGTTGCGAAAAGAACCAAGCAAAATCCATTAAACCATTCGATAGATTAAAAACCTTTTTGAATTCCATAAAGGCAGAAGATGTCGAAAAAAGGAATTCAATTAATAATGAAAAACTCACGAAAACTATTTCAGAACACATGTTTTTAGTAATTAATGACGAACTCAAAAGTAAGGTTAACACTGATGAACTAATGCTAGTTGACCCAGAAAGCCTAGCAAAAAATAGCAGTGTGTTATTACTTGGACCAATAGTGACTCCGTTGACAGATGATCAATTGAAATTAGCTATGGATCGTATTTCAAATGAGATTTCGAAACCAGAGTATCTACCACTTCTTCGACAGTTGTCGGCAGGGCAATTATACAATCACAACAATCTTCGAAAAAGTTTCATTACCGGTCCAGAGACAAGAAGATACATTAAGCCACACAGGTGTAATTATCAATCGAAACTCGCAAAGATTTACGGGGGCCCCAAATGGATTGTCTGCACCGGCTACCTTAATTTAAATGAACCTAGTCTGTATGATTAA
Protein
MPSWIVKIPLLLILLIQHTIPMAMLQKPSYFSSYDSNSDLEEYMKTKSYIPNEENLPKMPSAVTYSGTDSSYVLSKLTDEELYNLLNSQPKKSEYGLSDLIKVGYNADRDAPKYFVKQKEDVDFKSKIAKLPQNHLYDKRIDNQNAVYRLQNREIVNAADDRNYPAVKKLTELLNNNVRGWYDDEFSGIGGDKKRDLLFNILVAELRSLCCEKNQAKSIKPFDRLKTFLNSIKAEDVEKRNSINNEKLTKTISEHMFLVINDELKSKVNTDELMLVDPESLAKNSSVLLLGPIVTPLTDDQLKLAMDRISNEISKPEYLPLLRQLSAGQLYNHNNLRKSFITGPETRRYIKPHRCNYQSKLAKIYGGPKWIVCTGYLNLNEPSLYD

Summary

Ontologies

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.925241
 
 
Length:
386
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
3.56498
Exp number, first 60 AAs:
3.56324
Total prob of N-in:
0.17594
outside
1  -  386
 
 

Population Genetic Test Statistics

Pi
2.332919
Theta
40.432823
Tajima's D
-1.589343
CLR
1.440445
CSRT
0.048397580120994
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 KITEIINNNVR 100.00 6e-06
26822097 ISNEISKPEYIPIIR 100.00 3e-05
26822097 SIKPFDR 100.00 0.004
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