SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08811
Pre Gene Modal
BGIBMGA007873
Annotation
PREDICTED:_uncharacterized_protein_LOC106129363_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.51 Extracellular   Reliability : 1.028 Nuclear   Reliability : 1.571
 

Sequence

CDS
ATGTCGCCACAGCGTCGATGTATTCTAATCGTATTATTGGCAGCGGGAGTAATAAACGCGTCTCCGAAAGTCAACGATGTACACGACAAGCAGCAAAACTGTGAAAATTCTCCGCAAGGCCACGTCTTCAACGAAGCCCAGGTTATTGGCACATGGCACCCGCAACAACACAAATCAAAGAAAACTTACGCATTCGGGGACTCCGAATGTGTTCAATTAACTTCGGTCAACGAACAGGAAAGAAACGAATTAAAAGAAATGATCGGGAATTACGTCGACAAAATGAAATGGGAGAACTTAACTCTGAGAATGCAAATACCTTGTCCGAGTGACAAACATAATGTAACCAAAGACTATTATTTAGAGCGTCTTGAGGGCGACGGTTTTTACAGGACTCTAAACATGCCTCCGCCGACTGCTAAACTGGAATTCGGCGTCTTTCGTCGTTACCCAATACGTTTGAAGATCATCGAGAATGAGTACCTTGGTATAATGGACTGTCACGTGTTCCTTTTAGGCAAAGAGCCATCTGACGGTACAAAAGTCGACGAACGCCTAAACAAAATAACGCAAATATATTGGCCAGACGACATATAA
Protein
MSPQRRCILIVLLAAGVINASPKVNDVHDKQQNCENSPQGHVFNEAQVIGTWHPQQHKSKKTYAFGDSECVQLTSVNEQERNELKEMIGNYVDKMKWENLTLRMQIPCPSDKHNVTKDYYLERLEGDGFYRTLNMPPPTAKLEFGVFRRYPIRLKIIENEYLGIMDCHVFLLGKEPSDGTKVDERLNKITQIYWPDDI

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.995609
 
 
Length:
198
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.27541
Exp number, first 60 AAs:
0.27331
Total prob of N-in:
0.12721
outside
1  -  198
 
 

Population Genetic Test Statistics

Pi
284.705815
Theta
195.592985
Tajima's D
1.403617
CLR
0
CSRT
0.765061746912654
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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