Gene

KWMTBOMO08807

Pre Gene Modal

BGIBMGA007876

Annotation

PREDICTED:_CTL-like_protein_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr15(-):5587996-5605647      View in EpiBrowser

Full name

CTL-like protein 2      

Location in the cell

PlasmaMembrane   Reliability : 4.96

CDS

ATGTACATTGGTTACTATGGTTATCAAAATGGTAACATTGAAAAACTTTTAGCTCCAATGGACTCGAACGGTAAGCGATGCGGCGTTGATTCTGGTGTTATAAATAGAAAATATTTATTATTTTTCAACTTAGCGAATTGTCTAAGGCCCGAGACACCGATTACTGGATGCCCTACTCCACAAGTTTGCGTAGAGGAATGTCCCCAAAGGACAGTAAAATTTATTGAACAGCTAACTTCGGCAAATTTCAATGAAATGAAACGAGAAATGGTGTGCATCGACGGCGTTAATACGGAAACAATGACATATAGCGACGCTTTGCAATACATGAACGAAGATAAATGTGCTGGCCTAATTTTACAAAGCCAGTCAGTGTTGTTTCGCTGCATCGGAGATCTATCCACCATCCCATGCAAGGGCCCACCCAAACCGACCACAAATTGGATGCAAACCGACGGAGACACTACATGTGTAAGAAATCCTAAGGAAGGACAGATGTCGTTGTTCAATCGTGCAACGGCTCTCGACACTTATATTGGCAGGATTGTCGCTAGCTTGGTGACCGCCTTCACGAAAAACGAAAGGGACACGCATATTCTATCATCAAAAATCGTCCAAGATCTGGTTCAATCTCGGTGGTACCTCGCTGGAGCTTTATTGGCAGTTGTCATTATCTGTTTCATTTATATAGTTTTACTGCGGTTTGTCATTACACCTATCGTCTGGGCTTCCATCGGAGGGCTCTTAGCGCTACTTATTTTTACGTCATACTTGTGCTATGGAAACTACGTATATTACCGTGATAATCCCATTCAACTTCACCAGACGACAAATCTCAAAGGATATGCGCAGTCTATATTCAGCAAGGCGTCGACGTGGATGGTCATATTAATTGTGACGGCCTTTCTAAGTTTCATACTTTTAGTAATGGTTGTATTTTTACGAAACCGCATCAGGATCGCCATTGCACTCATACGAGAGGGCAGCAGAGCATTGTCGGCGGTCAAATCAACAGTTTTATTGCCTATATTCCCATGGATATTTCAATGTGCTGTCATCGCCTATTGGCTGTTCTTGTTTATGTCCTTGCTGTCGATAGGAACGCCGATATTCAAGACTGCCAACTTAAAATCGGATACCAATTGCAAATGTGCAATTTATACCGAAGATAATATGGATTGTGATCCAAATAAATTTACACTCTCAAGTCGCGATTTAAGTGGCGGCCCTTGCCGACAGGCGACTTGCACCTTCCAAAGCTTTGAAACACCTCAGATCATCTTATATTTACATTTGGCCAACTTTCTCGGATTTTTTTGGACGATGTTCTTCATTACCGGTATTACCGACATGATACTCGCGAGCACCTTCGCCACTTGGTACTGGACTTTCCACAAAAGCGATCTTCCTTTCTTCACCCTCACGAGAGGCGCGTACAGAACCATAAGATACCACACGGGAACCGTGGCATTTGGCTCATTAATTATTGCCATTGTTCGAGTGATAAGAGTAATACTCGAGTACATTGATCACAAATTGAAAAAGTTCGAAAATCCCTTTACGAGATTCATAATGTGCTGTTGCAAATGTTTGTTCTGGTGCCTGGAGAGCTTCCTCAAGTTCATCAATAAGAACGCTTTTATAATGTGTGCGGTGCACGGACACAACTTCTGTAAAAGTGCTAGAGATGCGTTTTCCTTACTCCTAAGGAATGTTGTTAGAGTCGTTGTTTTAGACAAGGTGACCGATTTCATATTCTTCGTATCGAAGCTTCTGATATCAATAGGGATAGGCTTCGCAGTATACTATATTTTAGAATGGAATTTTACTTACGAAATCACGAAAGGCCAACGTTTAAATTACAACTACGTACCAGCCATAATACTGAGTGTCGCGACTTACATCATATGCACTGTGTTCTTCAATGTTTACTCTATGGCTGTTGATACTTTGTTCCTTTGTTTCCTTGAAGACTGCGAGAGAAATGATGGATCCCCCGAAAAACCATATTTTATGTCAAAAAATCTTATGAAAATACTTGGAAAAAGAAACAAACAGCTATAA

Protein

MYIGYYGYQNGNIEKLLAPMDSNGKRCGVDSGVINRKYLLFFNLANCLRPETPITGCPTPQVCVEECPQRTVKFIEQLTSANFNEMKREMVCIDGVNTETMTYSDALQYMNEDKCAGLILQSQSVLFRCIGDLSTIPCKGPPKPTTNWMQTDGDTTCVRNPKEGQMSLFNRATALDTYIGRIVASLVTAFTKNERDTHILSSKIVQDLVQSRWYLAGALLAVVIICFIYIVLLRFVITPIVWASIGGLLALLIFTSYLCYGNYVYYRDNPIQLHQTTNLKGYAQSIFSKASTWMVILIVTAFLSFILLVMVVFLRNRIRIAIALIREGSRALSAVKSTVLLPIFPWIFQCAVIAYWLFLFMSLLSIGTPIFKTANLKSDTNCKCAIYTEDNMDCDPNKFTLSSRDLSGGPCRQATCTFQSFETPQIILYLHLANFLGFFWTMFFITGITDMILASTFATWYWTFHKSDLPFFTLTRGAYRTIRYHTGTVAFGSLIIAIVRVIRVILEYIDHKLKKFENPFTRFIMCCCKCLFWCLESFLKFINKNAFIMCAVHGHNFCKSARDAFSLLLRNVVRVVVLDKVTDFIFFVSKLLISIGIGFAVYYILEWNFTYEITKGQRLNYNYVPAIILSVATYIICTVFFNVYSMAVDTLFLCFLEDCERNDGSPEKPYFMSKNLMKILGKRNKQL

Similarity

Belongs to the CTL (choline transporter-like) family.

Keywords

Complete proteome   Glycoprotein   Membrane   Reference proteome   Transmembrane   Transmembrane helix  

Feature

chain  CTL-like protein 2

Uniprot

H9JEC9   A0A194QME2   A0A3S2LS77   A0A2A4K470   A0A1E1W227   A0A212F0V1   + More
A0A2A4K362   A0A2A4K4L2   A0A2A4K4W0   A0A194PRZ1   A0A1L8DEX3   A0A2H1WUM1   A0A1Y1JUX5   A0A1Q3FY28   A0A1Q3FXG9   A0A1Q3FY33   A0A1Q3FY17   A0A1L8DEM6   A0A1L8DEG2   A0A182NQ24   A0A023EV43   A0A0A1WF97   A0A2M4A2S3   A0A1I8Q561   D6WC46   A0A2M4CZP1   A0A1S4H3Q3   A0A139WME4   A0A139WM68   T1PF59   A0A1I8NC65   A0A1Q3G3N9   A0A1Q3G3L7   A0A1Q3G3L9   A0A182JP45   A0A182R922   A0A1Q3G3U6   A0A1Y1JW24   B4K750   A0A182YE22   A0A034W7A9   B4NBG0   A0A0M4EEH7   Q7PRJ0   Q17IP0   A0A182PBV3   A0A182JCJ5   A0A3B0JE03   W5JPK8   B3MT44   A0A2M4CQB0   B4M0B5   A0A1S4H4N4   B4JRR0   A0A2M3YYN7   B4G2H7   Q29AB8   A0A0P4VUD9   B4QZG9   C4XVJ5   Q9VAP3   A0A182W864   A0A224XKU8   A0A0K8W159   A0A0A9XR06   A0A146L112   A0A0A9XHQ7   B4PQ70   A0A0A9ZCJ5   A0A1B6JVG8   A0A0A9Z508   A0A1W4UIU2   B3P5L1   W8B7F8   A0A2M4A3G6   A0A1L8DDR7   A0A336LLH3   A0A1L8DDT3   A0A067R4F2   A0A1B6FU38   A0A0T6B8V2   A0A1B6D8K7   T1HK07   A0A1B6ECV3   A0A232F0V2   A0A2M4A3J7   K7IXB7   A0A0P5D418   A0A0P5DB75   A0A0N8DVF3   A0A0P5YYJ2   A0A0P5A1H5   A0A182X4Y8   E9FWB8   A0A2H8TYW2   J9K3H1   A0A2J7RKG8   A0A087UQP2   A0A0P6IHC9   A0A0P6GFU0  

Pubmed

19121390    26354079    22118469    28004739    24945155    25830018    + More
18362917    19820115    12364791    25315136    17994087    18057021    25244985    25348373    17510324    20920257    23761445    15632085    23185243    27129103    10731132    12537572    25401762    26823975    17550304    24495485    24845553    28648823    20075255    21292972   

EMBL

BABH01002889    KQ461195    KPJ06708.1    RSAL01000266    RVE43260.1    NWSH01000179    + More
PCG78704.1    GDQN01010070    GDQN01005024    JAT80984.1    JAT86030.1    AGBW02011012    OWR47375.1    PCG78701.1    PCG78703.1    PCG78702.1    KQ459596    KPI95519.1    GFDF01009157    JAV04927.1    ODYU01011134    SOQ56682.1    GEZM01103029    GEZM01103028    GEZM01103027    GEZM01103026    GEZM01103025    GEZM01103023    JAV51600.1    GFDL01002578    JAV32467.1    GFDL01002758    JAV32287.1    GFDL01002577    JAV32468.1    GFDL01002588    JAV32457.1    GFDF01009249    JAV04835.1    GFDF01009248    JAV04836.1    GAPW01000278    JAC13320.1    GBXI01016613    GBXI01014997    JAC97678.1    JAC99294.1    GGFK01001772    MBW35093.1    KQ971316    EEZ98759.2    GGFL01006571    MBW70749.1    AAAB01008849    KYB28985.1    KYB28984.1    KA647324    AFP61953.1    GFDL01000631    JAV34414.1    GFDL01000647    JAV34398.1    GFDL01000642    JAV34403.1    GFDL01000609    JAV34436.1    GEZM01103024    JAV51605.1    CH933806    EDW16363.1    KRG02065.1    KRG02066.1    GAKP01008359    GAKP01008358    GAKP01008357    JAC50594.1    CH964232    EDW81124.2    CP012526    ALC46404.1    CH477238    EAT46520.1    OUUW01000005    SPP80594.1    ADMH02000477    ETN66327.1    CH902623    EDV30434.1    KPU72849.1    GGFL01003329    MBW67507.1    CH940650    EDW67277.1    CH916373    EDV94450.1    GGFM01000587    MBW21338.1    CH479179    EDW24022.1    CM000070    EAL27432.3    KRT00021.1    KRT00022.1    GDKW01000296    JAI56299.1    CM000364    EDX14807.1    BT088799    ACS16657.1    AE014297    GFTR01007777    JAW08649.1    GDHF01030697    GDHF01023730    GDHF01021624    GDHF01014652    GDHF01007493    GDHF01002436    JAI21617.1    JAI28584.1    JAI30690.1    JAI37662.1    JAI44821.1    JAI49878.1    GBHO01024069    JAG19535.1    GDHC01016571    JAQ02058.1    GBHO01024075    GBRD01010862    GDHC01004258    JAG19529.1    JAG54962.1    JAQ14371.1    CM000160    EDW98339.1    KRK04229.1    GBHO01004069    JAG39535.1    GECU01004508    JAT03199.1    GBHO01004070    GBRD01010861    JAG39534.1    JAG54963.1    CH954182    EDV53261.1    GAMC01013592    GAMC01013591    GAMC01013590    JAB92963.1    GGFK01001970    MBW35291.1    GFDF01009471    JAV04613.1    UFQS01000012    UFQT01000012    SSW97215.1    SSX17601.1    GFDF01009472    JAV04612.1    KK852703    KDR18085.1    GECZ01016075    JAS53694.1    LJIG01009097    KRT83761.1    GEDC01015308    JAS21990.1    ACPB03013231    ACPB03013232    ACPB03013233    ACPB03013234    GEDC01001594    JAS35704.1    NNAY01001328    OXU24345.1    GGFK01002046    MBW35367.1    AAZX01000026    GDIP01165727    JAJ57675.1    GDIP01158490    GDIP01145839    GDIP01064997    JAJ64912.1    GDIQ01088044    JAN06693.1    GDIP01053310    JAM50405.1    GDIP01217925    JAJ05477.1    GL732526    EFX88458.1    GFXV01007690    MBW19495.1    ABLF02039129    NEVH01002737    PNF41327.1    KK121074    KFM79681.1    GDIQ01011066    JAN83671.1    GDIQ01053817    JAN40920.1   

Proteomes

UP000005204    UP000053240    UP000283053    UP000218220    UP000007151    UP000053268    + More
UP000075884    UP000095300    UP000007266    UP000095301    UP000075881    UP000075900    UP000009192    UP000076408    UP000007798    UP000092553    UP000007062    UP000008820    UP000075885    UP000075880    UP000268350    UP000000673    UP000007801    UP000008792    UP000001070    UP000008744    UP000001819    UP000000304    UP000000803    UP000075920    UP000002282    UP000192221    UP000008711    UP000027135    UP000015103    UP000215335    UP000002358    UP000076407    UP000000305    UP000007819    UP000235965    UP000054359   

PRIDE

H9JEC9    Q7PRJ0    C4XVJ5    Q9VAP3   

Pfam

PF04515   Choline_transpo        + More
PF01740   STAS
PF00916   Sulfate_transp

Interpro

IPR007603   Choline_transptr-like        + More
IPR001902   SLC26A/SulP_fam       
IPR002645   STAS_dom       
IPR011547   SLC26A/SulP_dom       
IPR036513   STAS_dom_sf       

SUPFAM

SSF52091   SSF52091       

Gene 3D

3.30.750.24    

ProteinModelPortal

H9JEC9   A0A194QME2   A0A3S2LS77   A0A2A4K470   A0A1E1W227   A0A212F0V1   + More
A0A2A4K362   A0A2A4K4L2   A0A2A4K4W0   A0A194PRZ1   A0A1L8DEX3   A0A2H1WUM1   A0A1Y1JUX5   A0A1Q3FY28   A0A1Q3FXG9   A0A1Q3FY33   A0A1Q3FY17   A0A1L8DEM6   A0A1L8DEG2   A0A182NQ24   A0A023EV43   A0A0A1WF97   A0A2M4A2S3   A0A1I8Q561   D6WC46   A0A2M4CZP1   A0A1S4H3Q3   A0A139WME4   A0A139WM68   T1PF59   A0A1I8NC65   A0A1Q3G3N9   A0A1Q3G3L7   A0A1Q3G3L9   A0A182JP45   A0A182R922   A0A1Q3G3U6   A0A1Y1JW24   B4K750   A0A182YE22   A0A034W7A9   B4NBG0   A0A0M4EEH7   Q7PRJ0   Q17IP0   A0A182PBV3   A0A182JCJ5   A0A3B0JE03   W5JPK8   B3MT44   A0A2M4CQB0   B4M0B5   A0A1S4H4N4   B4JRR0   A0A2M3YYN7   B4G2H7   Q29AB8   A0A0P4VUD9   B4QZG9   C4XVJ5   Q9VAP3   A0A182W864   A0A224XKU8   A0A0K8W159   A0A0A9XR06   A0A146L112   A0A0A9XHQ7   B4PQ70   A0A0A9ZCJ5   A0A1B6JVG8   A0A0A9Z508   A0A1W4UIU2   B3P5L1   W8B7F8   A0A2M4A3G6   A0A1L8DDR7   A0A336LLH3   A0A1L8DDT3   A0A067R4F2   A0A1B6FU38   A0A0T6B8V2   A0A1B6D8K7   T1HK07   A0A1B6ECV3   A0A232F0V2   A0A2M4A3J7   K7IXB7   A0A0P5D418   A0A0P5DB75   A0A0N8DVF3   A0A0P5YYJ2   A0A0P5A1H5   A0A182X4Y8   E9FWB8   A0A2H8TYW2   J9K3H1   A0A2J7RKG8   A0A087UQP2   A0A0P6IHC9   A0A0P6GFU0  

KEGG

101736146    K15377 solute carrier family 44 (choline transporter-like protein), member 2/4/5 | (RefSeq) CTL-like

GO

GO:0016021   GO:0008271  

PANTHER

PTHR12385   PTHR11814  

Subcellular location

Membrane  

Length:

687

Number of predicted TMHs:

9

Exp number of AAs in TMHs:

196.30286

Exp number, first 60 AAs:

0.00041

Total prob of N-in:

0.36879

outside

1  -  212

TMhelix

213  -  235

inside

236  -  241

TMhelix

242  -  264

outside

265  -  291

TMhelix

292  -  314

inside

315  -  338

TMhelix

339  -  361

outside

362  -  438

TMhelix

439  -  461

inside

462  -  481

TMhelix

482  -  504

outside

505  -  518

TMhelix

519  -  541

inside

542  -  583

TMhelix

584  -  606

outside

607  -  620

TMhelix

621  -  643

inside

644  -  687

 

 

Pi

184.828118

Theta

168.632499

Tajima's D

-0.777718

CLR

0.587546

CSRT

0.181640917954102

Interpretation

Possibly Positive selection