Silkworm Genome Informatics Database

Gene

KWMTBOMO08796

Annotation

Zinc_finger_protein_1_[Operophtera_brumata]

Location

Bomo_Chr15(-):5472548-5473817 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 1.806

CDS

ATGAATTCATTGTCAAAACATAGTATTTCCATGCATCAAAATCGCAAGCATGCAGGCACCGTCACAGGCAATGGTATCTACAGACTATACCATTGTACTACTTGTACTTATTCAACTCCACACAGTCAAACATTAATAAACCACATGAGAAGACACAATGGAGAGCGACCATTTGTTTGCATACTGGAAACAAGGAGTACAAATGTAACATTTGTAAAGTTTGTTTCTTCACACTTGGTGATCTGCATCGTCATCAAAGGAAACACAGTTCTGAAAAGCCCTATTCTTGCCCTACTTGTACTCAAAGATTCAGTCATAGTCCCAGTGTTAACAAACATATGA

Protein

MNSLSKHSISMHQNRKHAGTVTGNGIYRLYHCTTCTYSTPHSQTLINHMRRHNGERPFVCILETRSTNVTFVKFVSSHLVICIVIKGNTVLKSPILALLVLKDSVIVPVLTNI

Uniprot

M7AJ15

Pubmed

23624526

EMBL

KB594326 EMP25066.1

Proteomes

UP000031443

Pfam

PF00096 zf-C2H2

Interpro

IPR013087   Znf_C2H2_type        + More
IPR036236   Znf_C2H2_sf
IPR001909   KRAB

SUPFAM

SSF57667 SSF57667

ProteinModelPortal

M7AJ15

PDB

5UND E-value=0.00181307, Score=91

KEGG

101736983 no KO assigned | (RefSeq) zinc finger protein OZF-like

GO

GO:0003676 GO:0006355 GO:0046872 GO:0005524 GO:0005634 GO:0016817 GO:0008270 GO:0043565 GO:0016876 GO:0043039

Length:

113

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.35197

Exp number, first 60 AAs:

0.0242

Total prob of N-in:

0.29867

outside

1 - 113

Pi

216.675281

Theta

213.651918

Tajima's D

0.057057

CLR

206.637852

CSRT

0.390030498475076

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics