Gene

KWMTBOMO08795

Annotation

PREDICTED:_gastrula_zinc_finger_protein_XlCGF57.1-like_[Papilio_machaon]

Location

Bomo_Chr15(-):5472380-5473287      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 2.567

CDS

ATGGAATGTCACTTGTGTGGGTATAAAACACACACAAAGAAAAATTTAATTATACATTTGAAGAGGCATACTGGAAACAAGGAGTACAAATGTAACATTTGTAAAGTTTGTTTCTTCACACTTGGTGATCTGCATCGTCATCAAAGGAAACACAGTTCTGAAAAGCCCTATTCTTGCCCTACTTGTACTCAAAGATTCAGTCATAGTCCCAGTGTTAACAAACATATGAAAATTGTTCATGGAGTGGATTACAAATGGGGTGAGGTTAGAAAAAAGCAGTTGAAAGACTCAAGATTAAAAAATAAACCATACCAAATTAAAAATTATGAGAAATAA

Protein

MECHLCGYKTHTKKNLIIHLKRHTGNKEYKCNICKVCFFTLGDLHRHQRKHSSEKPYSCPTCTQRFSHSPSVNKHMKIVHGVDYKWGEVRKKQLKDSRLKNKPYQIKNYEK

Uniprot

A0A194QMD2   S4PY48   A0A2A4K5K8   A0A437AYJ9   A0A1E1WL68   A0A212F100   + More
A0A0L7LFV7   A0A1S3RFD0   A0A1S3RDQ4   A0A060VS72   A0A060YND4   A0A060VVV2   A0A1S3SK46   A0A1S3RF79   A0A1S3RET6   A0A1S3SJX5   A0A1S3RG50   A0A1S3RFF1   A0A060VRY8   A0A1S3RF85   A0A060VZ81   A0A1S3SKA3   A0A1S3RE07   A0A1S3PCI7   A0A060WZS2   A0A1S3SK47   A0A060VRZ7   V4B2M4   A0A060VXJ2   A0A1S3RER1   A0A3P9CKJ5   A0A146TRM0   A0A2D4IPG0   A0A146P9Z1   A0A060VVQ8   A0A146NYE0   A0A3B4F2M7   A0A146T9H4   A0A444T641   A0A1S3RPN5   A0A3S2NGF5   A0A0P4WLG9   A0A0N4TZE9   A0A3Q3VJL0   E2AVB7   A0A444SL13   A0A3Q1I5G9   K1PPH7   A0A1Y1N7I5   A0A158NIL6   A0A2Y9S1R9   A0A195BDT3   A0A3B4WQH9   A0A2I4AML3   A0A2Y9S0Z8   A0A2F0BLF2   A0A2J8LB03   B4DI05   A0A0M9A0N1   A0A2J8S7P4   A0A0L7RGB1   A0A3Q3KK60   A0A341AIE9   A0A3Q3VP94   A0A1I7VHE3   A0A146TT03   A0A3P8VJV2   A0A2U4BUD8   L8Y7X3   A0A2Y9RWV3   A0A1I7V9G4   A0A3Q3W0C8   A0A146SD66   A0A2Y9FG06   E1BKB3   K1QUI9  

EC Number

2.1.1.-

Pubmed

26354079    23622113    22118469    26227816    24755649    23254933    + More
25186727    20798317    22992520    28004739    21347285    15616553    28112733    25217238    24487278    23385571    19393038   

EMBL

KQ461195    KPJ06698.1    GAIX01003913    JAA88647.1    NWSH01000105    PCG79511.1    + More
RSAL01000266    RVE43251.1    GDQN01003453    JAT87601.1    AGBW02011012    OWR47384.1    JTDY01001240    KOB74438.1    FR904290    CDQ57681.1    FR911205    CDQ90974.1    FR904314    CDQ58941.1    CDQ57627.1    CDQ57635.1    FR904859    CDQ72828.1    CDQ57642.1    KB203854    ESO82734.1    CDQ57689.1    GCES01090818    JAQ95504.1    IACK01115956    LAA86026.1    GCES01145541    JAQ40781.1    CDQ58957.1    GCES01149797    JAQ36525.1    GCES01096848    JAQ89474.1    SAUD01010789    RXG61132.1    RSAL01000114    RVE46925.1    GDRN01037995    JAI67273.1    UZAD01013619    VDN95532.1    GL443064    EFN62613.1    SAUD01032444    RXG54042.1    JH816467    EKC18365.1    GEZM01011814    JAV93428.1    ADTU01016948    KQ976513    KYM82374.1    NTJE010291032    MBW03836.1    NBAG03000299    PNI44456.1    AC004232    AJ003147    AK295350    BAG58317.1    KQ435794    KOX73946.1    NDHI03003602    PNJ16780.1    KQ414597    KOC69890.1    GCES01090946    JAQ95376.1    KB364449    ELV12508.1    GCES01107771    JAQ78551.1    JH815769    EKC25221.1   

Proteomes

UP000053240    UP000218220    UP000283053    UP000007151    UP000037510    UP000087266    + More
UP000193380    UP000030746    UP000265160    UP000265000    UP000261460    UP000288706    UP000038020    UP000278627    UP000261620    UP000000311    UP000265040    UP000005408    UP000005205    UP000248480    UP000078540    UP000261360    UP000192220    UP000005640    UP000053105    UP000053825    UP000261600    UP000252040    UP000095285    UP000265120    UP000245320    UP000011518    UP000009136   

PRIDE

B4DI05   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF00856   SET
PF01352   KRAB

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR011017   TRASH_dom       
IPR039705   REPIN1       
IPR001214   SET_dom       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       
IPR017114   YY-1-like       
IPR017125   Znf_PRDM5-like       
IPR027764   Zfp18       
IPR003656   Znf_BED       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

A0A194QMD2   S4PY48   A0A2A4K5K8   A0A437AYJ9   A0A1E1WL68   A0A212F100   + More
A0A0L7LFV7   A0A1S3RFD0   A0A1S3RDQ4   A0A060VS72   A0A060YND4   A0A060VVV2   A0A1S3SK46   A0A1S3RF79   A0A1S3RET6   A0A1S3SJX5   A0A1S3RG50   A0A1S3RFF1   A0A060VRY8   A0A1S3RF85   A0A060VZ81   A0A1S3SKA3   A0A1S3RE07   A0A1S3PCI7   A0A060WZS2   A0A1S3SK47   A0A060VRZ7   V4B2M4   A0A060VXJ2   A0A1S3RER1   A0A3P9CKJ5   A0A146TRM0   A0A2D4IPG0   A0A146P9Z1   A0A060VVQ8   A0A146NYE0   A0A3B4F2M7   A0A146T9H4   A0A444T641   A0A1S3RPN5   A0A3S2NGF5   A0A0P4WLG9   A0A0N4TZE9   A0A3Q3VJL0   E2AVB7   A0A444SL13   A0A3Q1I5G9   K1PPH7   A0A1Y1N7I5   A0A158NIL6   A0A2Y9S1R9   A0A195BDT3   A0A3B4WQH9   A0A2I4AML3   A0A2Y9S0Z8   A0A2F0BLF2   A0A2J8LB03   B4DI05   A0A0M9A0N1   A0A2J8S7P4   A0A0L7RGB1   A0A3Q3KK60   A0A341AIE9   A0A3Q3VP94   A0A1I7VHE3   A0A146TT03   A0A3P8VJV2   A0A2U4BUD8   L8Y7X3   A0A2Y9RWV3   A0A1I7V9G4   A0A3Q3W0C8   A0A146SD66   A0A2Y9FG06   E1BKB3   K1QUI9  

PDB

2I13     E-value=1.89246e-08,     Score=134

KEGG

101736983    no KO assigned | (RefSeq) zinc finger protein OZF-like

GO

GO:0003676   GO:0008270   GO:0005634   GO:0008168   GO:0046872   GO:0006355   GO:0000976   GO:0003677   GO:0005524   GO:0016817   GO:0043565   GO:0016876   GO:0043039  

PANTHER

PTHR24406:SF10   PTHR23226:SF190  

Length:

111

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00047

Exp number, first 60 AAs:

0.00047

Total prob of N-in:

0.40661

outside

1  -  111

 

 

Pi

204.384611

Theta

200.524744

Tajima's D

0.046188

CLR

206.637852

CSRT

0.385680715964202

Interpretation

Uncertain