SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08792
Annotation
PREDICTED:_protein-associating_with_the_carboxyl-terminal_domain_of_ezrin_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 1.802 Nuclear   Reliability : 2.066
 

Sequence

CDS
ATGGGTAACGAAAACTCACAGCTAAGTGGCTTGGAAATAGAGGATAAAGCTGTAGAGATAACAGAATTTTGGCAACAATATCAAGCCACTATAAAAGATAGTTGTAGATACTTCAGTCTGAAAGGGGATGGTTCAGTGTCTGTTTTCAAAGGAGAAGCGGCTGCAGGACCACTTTGGGCTGTATCGACACCTCTAGAAAAATTTTGTAATAATTTATTAAAATATCGACATCCATGTATTGTGAGATACATATCAGCATGGCAACAGCGTTCGACACTGCATTTGGCAACAGAATATGTGCTACCTCTAAGTCATGTTCTGAAAACTCTTTCACCTTTACAAATTTGCATTGGATTAAACAACATTCTTAGAGCTTTAGTATTCTTGCATGATCAGGCTAGCATGTCACATAATAATGTCAGTACTTCAGCTGTATATGTGACAGGTGATGGCCAGTGGAAACTAGGTGGCTTGCAATACTTATGTCCATTTTCTGAGCTCACACCGGCTTATTTAAAACATGCTAGAATCCATAGGTATGATAAAGCCATTGATCCCAATGAAGATTCAAATGAGCTAACAACAAAAGTGGATCAATATGGTTTTGCAGTACTTGTTGAAGATGTTCTAAAGGGACAAAGCGATGATGAGGTACCATATTTAACAAATTTTAAAAAATACTGTAAAGACAACTTGAAAAATGAAGATCCAACAAAAAGGTCAAAGCTATCAGAGGTTTTGCAACACAATTTTTTCAACCACACATTTATCAGTATTTATAAGTTTCTTACATTCCTGCCTTTGAAAAGCGAAGATGAAAGAAGTGAATTCTTCACAACCATTTTAAACAATTTGAAATGTTATGATGAGGAAACTGTAGCTAAGCAATTGAGTGGATTGTTGCTTTCAAGACTCACAATGTTAGATGCAACTGCACGGAGGGAAGTCATTCCATATATCCTCGAACCTTGTAATGAGAGACAACAAAATAGTGAACATCCAGGTTTTTTTAGTTTAAACGTGTTCAAAGAGCATGTGAAACCTAGACTTTTGCAACTGTTCAGTGTCAGAGACAGTCAGATAAGAATGTTGTTATTGATGCATTTTTCAAAGTATATTCATGTCTTCACACACGAGGAGCTCTCGCAACATATACTACCCGAATTACTGTTGGGTATAAAAGACACAGATGATAACTTAGTAGCGTCGACATTAATATGCCTAAGTGTCTTAGTACCTATACTCGGAGCTGCAGCCGTTGTAGGCGGAAAGAGATCAAAATATTTTACTGACGGAAGACCAAACTGTAAAAACAACTTGATAAAATCAACAAGCATCAACAAGCAAGATAAAAAAGTGTATCTCTTAGAAAAATCATTAAGGGAATTACCCTGTTCAGAGGATGTTTATGAAAATGACAATACCGGTCTGACCACTTTTACGAATATAAACTTAAATGAAAGACCTACACCAGTCGGCGGTGAATCTTTGGAGGAAGAAGTAATATTAAGAGAATCTACAATTAATCAAGTTAACAGCGAAGAGGATTGGAGTGATTGGGATAACACTAACCGTCAGCTCACTATGGCAGAAACAGAAAGCATCTCGATTGAAGCAGATACCATTTATTTGAATACCGAAAAAAAAGAAGTACCCGTAATCGAAACGAACGTCGCAGCAGAAGATTCGGCATTAAAAAAATCATTGCTTCAAAAAGCAGCCATTGATGCCAAAAGAAACATTGTAGACATATCAGAGTTGGATATTAAACATCAAAAAACAAGTAATACAAAAAAAGGTGCTGACGAATTTGACTTTTTCGCTGACATGAAGCCTGTTATCGAGAAGGCCGCTGTTGTCAGTATCGATGATTTGGTTTCGAAAGAATTTAGCAGCAAGTTAACGTTCGTACCCGATGAAAACCAAGACGAGAACGAAGGTTGGGGTGAAAACTGGAATGATTAA
Protein
MGNENSQLSGLEIEDKAVEITEFWQQYQATIKDSCRYFSLKGDGSVSVFKGEAAAGPLWAVSTPLEKFCNNLLKYRHPCIVRYISAWQQRSTLHLATEYVLPLSHVLKTLSPLQICIGLNNILRALVFLHDQASMSHNNVSTSAVYVTGDGQWKLGGLQYLCPFSELTPAYLKHARIHRYDKAIDPNEDSNELTTKVDQYGFAVLVEDVLKGQSDDEVPYLTNFKKYCKDNLKNEDPTKRSKLSEVLQHNFFNHTFISIYKFLTFLPLKSEDERSEFFTTILNNLKCYDEETVAKQLSGLLLSRLTMLDATARREVIPYILEPCNERQQNSEHPGFFSLNVFKEHVKPRLLQLFSVRDSQIRMLLLMHFSKYIHVFTHEELSQHILPELLLGIKDTDDNLVASTLICLSVLVPILGAAAVVGGKRSKYFTDGRPNCKNNLIKSTSINKQDKKVYLLEKSLRELPCSEDVYENDNTGLTTFTNINLNERPTPVGGESLEEEVILRESTINQVNSEEDWSDWDNTNRQLTMAETESISIEADTIYLNTEKKEVPVIETNVAAEDSALKKSLLQKAAIDAKRNIVDISELDIKHQKTSNTKKGADEFDFFADMKPVIEKAAVVSIDDLVSKEFSSKLTFVPDENQDENEGWGENWND

Summary

EMBL
GDQN01000420    JAT90634.1    ODYU01005599    SOQ46607.1    NWSH01000105    PCG79514.1    + More
RSAL01000268    RVE43213.1    AGBW02011012    OWR47387.1    KQ459596    KPI95504.1    KQ461195    KPJ06695.1    GDQN01010739    JAT80315.1    GL449158    EFN83205.1    KK107077    QOIP01000010    EZA60560.1    RLU17330.1    KQ982490    KYQ55802.1    KQ981727    KYN36958.1    NEVH01009381    PNF33237.1    ADTU01011960    KQ976396    KYM93001.1    GL440194    EFN66178.1    GL888115    EGI67205.1    KQ414654    KOC65908.1    KQ971374    EEZ97411.1    KQ434831    KZC07828.1    GL764129    EFZ18398.1    KQ761783    OAD57040.1    KK853055    KDR11980.1    KQ435989    KOX67696.1    KZ288445    PBC25646.1    GBYB01000918    JAG70685.1    NNAY01000067    OXU31340.1    GEZM01033210    JAV84349.1    PYGN01000255    PSN49978.1    KQ977408    KYN02956.1    DS235762    EEB16648.1    GEDC01010660    JAS26638.1    AAAB01008984    EAA14766.4    KK855200    PTY21408.1    APCN01005849    GGFK01005485    MBW38806.1    AXCM01002560    AXCN02000626    APGK01056791    KB741277    KB631786    ENN71125.1    ERL86080.1    GEBQ01017804    JAT22173.1    GGFM01002921    MBW23672.1    ADMH02000573    ETN65818.1    KQ978691    KYN29218.1    GGFJ01002866    MBW52007.1    GGFM01002884    MBW23635.1    GGFM01007101    MBW27852.1    GGFJ01002865    MBW52006.1    GECZ01001152    JAS68617.1    GECZ01001935    JAS67834.1    ATLV01016154    KE525057    KFB41127.1    JXUM01139033    KQ568831    KXJ68871.1    GANO01000402    JAB59469.1    CH477671    EAT37469.1    GGFJ01003521    MBW52662.1    CH477267    EAT45469.1    GDKW01000300    JAI56295.1    DS232456    EDS42053.1    GBHO01017021    JAG26583.1    GFDF01006726    JAV07358.1    GFDF01006725    JAV07359.1    CH940649    EDW63445.1    CP012523    ALC40400.1    UFQS01000363    UFQT01000363    SSX03177.1    SSX23543.1    OUUW01000010    SPP85534.1    AJWK01010107    CH933807    EDW12069.1    CH479195    EDW27236.1    KA645920    AFP60549.1    GAKP01011379    JAC47573.1   
Interpro
IPR011989   ARM-like        + More
IPR011009   Kinase-like_dom_sf       
IPR016024   ARM-type_fold       
IPR000719   Prot_kinase_dom       
IPR021133   HEAT_type_2       
SUPFAM
SSF48371   SSF48371        + More
SSF56112   SSF56112       
Gene 3D
PDB
3VWA     E-value=2.9353e-06,     Score=124

Ontologies

Topology

Length:
654
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
16.4631
Exp number, first 60 AAs:
0.00211
Total prob of N-in:
0.03184
outside
1  -  400
TMhelix
401  -  423
inside
424  -  654
 
 

Population Genetic Test Statistics

Pi
184.21337
Theta
163.824628
Tajima's D
0.122942
CLR
102.131454
CSRT
0.403129843507825
Interpretation
Possibly Positive selection
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