SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08787
Annotation
PREDICTED:_protein_ROP_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 1.503
 

Sequence

CDS
ATGGGTAATATGAAGACAAACGTCAAAAGTGAAGTATATAAAAACTACATTAGTTATCAAAATAGCAAAGAGGTTCACAACATATATCCTAATGTGAACCTGCACGGGAACGTGCTATTATCTGTTAAGTGCCTGCAATCTCGTTGTAATGTCTACATAATTGGCGTTCGTTACGGACATTGGCACAAGGATAAAGCCCAGCAGACTATCAAGAACGTACCAAGATTGATTGTGTTCGTTGTTGGAGGTGTTTGCTTCTCCGAGATCCGCTGCGCTTACGAAGTGACTGCAGCCATCAAGAACTGGGAGGTGATCATCGGATCATCACACATACTCACTCCGGATAATTTCCTTTCGGACCTGAGCTCTCTCTCCGCCTAA
Protein
MGNMKTNVKSEVYKNYISYQNSKEVHNIYPNVNLHGNVLLSVKCLQSRCNVYIIGVRYGHWHKDKAQQTIKNVPRLIVFVVGGVCFSEIRCAYEVTAAIKNWEVIIGSSHILTPDNFLSDLSSLSA

Summary

Uniprot
ProteinModelPortal
PDB
1FVH     E-value=2.79723e-23,     Score=262

Ontologies

Topology

Length:
126
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.8375
Exp number, first 60 AAs:
0.0175
Total prob of N-in:
0.52728
outside
1  -  126
 
 

Population Genetic Test Statistics

Pi
381.778152
Theta
201.022931
Tajima's D
2.830365
CLR
0
CSRT
0.970501474926254
Interpretation
Uncertain
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