SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08779
Pre Gene Modal
BGIBMGA007692
Annotation
PREDICTED:_uncharacterized_protein_LOC106129365_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.8
 

Sequence

CDS
ATGGTACATCAAAACTATGGACCTGACACAAGTCATGAGGAACGCGCCCACCGGCGGCTCCAGATCATCTACGCACGGAAAACTAAGGAAAGACAAGTATTCATGCAAGAGCTTAAAGAAATAAGACAAAAGAATGACAAGCGTATGCTCAAGAAAGTTAGAGATTCAATTGGACCAATTTGGTATCAGGTTTTGAGCGTTCCGCAGAGAAGTGCTCTAGATACTTTAGAGTTTTCAATTTATCAGGACATTTTAGAAGGCCGTCCCATAAGAACGGCTAGAGTCATGAAAGAGCTAGGTTTATACCCACGTCCAAACATTATAAACTTAATGAACTGTGTATATTTAGGGCGGAATGATCCAAAAGAGATGCTAGCACAACTATTCCTTATGACTTACGGCCATCCTATCGATGGGAAACGAGCTGTCTACAATCTGAATGCCCGGCTCATGTTGTCTGGTATACTATATTTAGGTCTAGATAACCTCATACAATTGCTCCGTGAAAGATTCAAACCTGATCCAAGTCATAAAAAACCGGTCAATAAGCCGAAGGCTAAAATCGAACCTCCATTGAAATCACCGTATCTTCAAAAAATGATAGCTGTTCTTTATGAGCCTCCTAAAAGGAAGCCGAAGCGTCCACCTCCTTTGCCTAACTTAAATGATCTCAATGAGCCTTACGAAGAAGAGCCACCGGTGCCTAAGCTACCTCCCCCTCCGCCGCCACCACCACCACCAAAAAAAAGGCTAGCGCGATCGTTTTGTGACAAAATTGCTGGAATCATGAGAATTGAGCCTCACACATCCGTGACGGCAGTCAGTTTGAAAACAGTCGCTCGTACTAGTCATCGTAAGCTTCGGGGCTCAAAACTATCTGTTACTGAAGTTAAAAAGACCTATGGCATGAGTGGGGTTGGTAAAAGAAAAGGTGGCCGAAGAAGAAAACCCGTAGCGCCATCTACAGGCATGTGGAACACACAATACGTGATCAGCGGGGTTTGTTACATACGTGGAAAATCAGTTTTTGTGATTAGTACAGTTTCCGTGCTGCCTCCAACAGGGGATCTCATTCACGGTGGACACAAATACATGGGCGGTCAATGCGTCAACATACATTGTGGTTTCCGCGGGCGACCACCACCACCGAAACCTGATCCTTGCGATTGCGTTAAGAAATGGCACGATACAGTGATCCAATATGTAAAAAGAACAAAATGCTATTGCGGTCATCACTATGATTATGGTAACGAGGGAGCTTTTCTACCTGAAGAATTACCATTTTTCGAAAAGCCTACACGGAAATCGCCTTTCGTTTTTAATTATGACACAATTTATGACTTAGATGAAAAACGACTCCTCGTTCGCAAGGAATTCAAAAAACTTTGGGACACAGATAGCGTGCTTCACGTTGATGACGGTACTTTGAAAGCTATCAAAGATAAAAAGAAGAAAAAGTTAAAGAGGTCATCTACTACATGTTTGGGTGAATCTCCGAAGCCGGAAGATTACTTGAAATGCGCTCTGCGGCTGATGAAAAAAGTAAATGTCGCTGCAAGATTACCAGACATACATCTAGTTCCAGAGCTTAAGGAATGGATGAGGAGACGTATTTATGGTCCATTAAAGGGATACCAAATAACAGAAACACTGCGCAAAAGCGAATTCTATTGGCAGCTATTCCGTATGTTCGCTATGAAAGGATACGATCACGTTTCTTCTCCGAGAGATGCCATTTTCGGTGGTAATACAAATTGGATGCACAAGCGAGAATTACAACAACAATTCGACAAATACACTGAGAAATTTAAGTTACAAATGTATCGGTCTCACGCTTACGGTACCAATCTCATGTGGCCGTCGATGTGTCAGGCTCAATTCCCAGATAAAAAGTTTCGCGAAATATACTTTTCATATTTGTTTAAACGCATTGAAGACCTACAACTGATACGTCCATACAGTTCGAAAGAAGCTGCAGAACGTAAAGATATGTTGGCTCGTAGACGGTATTGTTGTGTGCCTGCAGGTATCGAAGCTAAAGATTGA
Protein
MVHQNYGPDTSHEERAHRRLQIIYARKTKERQVFMQELKEIRQKNDKRMLKKVRDSIGPIWYQVLSVPQRSALDTLEFSIYQDILEGRPIRTARVMKELGLYPRPNIINLMNCVYLGRNDPKEMLAQLFLMTYGHPIDGKRAVYNLNARLMLSGILYLGLDNLIQLLRERFKPDPSHKKPVNKPKAKIEPPLKSPYLQKMIAVLYEPPKRKPKRPPPLPNLNDLNEPYEEEPPVPKLPPPPPPPPPPKKRLARSFCDKIAGIMRIEPHTSVTAVSLKTVARTSHRKLRGSKLSVTEVKKTYGMSGVGKRKGGRRRKPVAPSTGMWNTQYVISGVCYIRGKSVFVISTVSVLPPTGDLIHGGHKYMGGQCVNIHCGFRGRPPPPKPDPCDCVKKWHDTVIQYVKRTKCYCGHHYDYGNEGAFLPEELPFFEKPTRKSPFVFNYDTIYDLDEKRLLVRKEFKKLWDTDSVLHVDDGTLKAIKDKKKKKLKRSSTTCLGESPKPEDYLKCALRLMKKVNVAARLPDIHLVPELKEWMRRRIYGPLKGYQITETLRKSEFYWQLFRMFAMKGYDHVSSPRDAIFGGNTNWMHKRELQQQFDKYTEKFKLQMYRSHAYGTNLMWPSMCQAQFPDKKFREIYFSYLFKRIEDLQLIRPYSSKEAAERKDMLARRRYCCVPAGIEAKD

Summary

Pfam
PF15995   DUF4771
Interpro
IPR031936   DUF4771       

Ontologies

GO

Topology

Length:
681
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.622309999999999
Exp number, first 60 AAs:
0.0003
Total prob of N-in:
0.03094
outside
1  -  681
 
 

Population Genetic Test Statistics

Pi
232.210232
Theta
192.540767
Tajima's D
0.475939
CLR
0.015041
CSRT
0.506924653767312
Interpretation
Uncertain
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