SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08778
Pre Gene Modal
BGIBMGA007887
Annotation
PREDICTED:_nuclear_receptor_GRF_isoform_X1_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.371
 

Sequence

CDS
ATGACGACATTCGCGCGCAGTCGTTATCGTGATTTTGCCGAATCGAGAGGTTCGGGACAAGGTGAATCTTCGTGTGATGTGCGTGGTTCGCCAGTAGACAAGCTGTCGGCGGGTGACAAGCTGGGGCCTGACGAGGCGCACGACGCCTCTGCGCAAGCACAACAACTGCAAACGATGACCTCCACAATGGGTAAATATTAA
Protein
MTTFARSRYRDFAESRGSGQGESSCDVRGSPVDKLSAGDKLGPDEAHDASAQAQQLQTMTSTMGKY

Summary

Similarity
Belongs to the nuclear hormone receptor family.
Pfam
PF00104   Hormone_recep        + More
PF00105   zf-C4
Interpro
IPR000536   Nucl_hrmn_rcpt_lig-bd        + More
IPR001628   Znf_hrmn_rcpt       
IPR013088   Znf_NHR/GATA       
IPR001723   Nuclear_hrmn_rcpt       
IPR035500   NHR-like_dom_sf       
SUPFAM
SSF48508   SSF48508       
Gene 3D

Ontologies

Topology

Subcellular location
Nucleus  
Length:
66
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.83704
inside
1  -  66
 
 

Population Genetic Test Statistics

Pi
234.06874
Theta
238.835618
Tajima's D
-0.259737
CLR
0
CSRT
0.298035098245088
Interpretation
Uncertain
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