Gene

KWMTBOMO08772

Annotation

PREDICTED:_coiled-coil_domain-containing_protein_28B_[Bombyx_mori]

Location

Bomo_Chr15(-):4970745-4971618      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.948

CDS

ATGAGTTTACATCTAGAAGAAGCAAACGAAACGCAACAATTAATGCAGAATGAAGGTGAAGATGACGAACAAAAGATACCACAAAGTGCGACTTCGCCTGTCACGAGTAATAAGATATCAAGCGAAGCCGCAAGCTTAACATCAAAAAATCATGAAAAAGTACTCACCAGTACTGGTAACAGTCTAAACGAATCCACGAAGGTGTCGTACGTAAATGAAAGACGTCTTCAAAGAGATTTTATGCGCTCGAATTATACTAATAGACCCAAGAACATACCAAAAGAAACCCCAGATGTTAAGAACATGGAGAAAGCACTACTTGAGCTATTAGATGATTTTCACACAGGAAAGTTAAGTGCTTTTGGATCAGGTTGTAGCATGGAACAAATGATTAACATAAGAGATCAACAGGAGCACTTAGCCAGGTTGCATTTCCGTTTGTGTGCTGATGTAGATAAACCCACAGAAGATAATTTTGAAAATTCAGCATCTAGAGATAAAATGGAACAGCTTGTTAAAAGCTTGGAACAGTTGTCGAATTCTATAGAAAGACTACATTGTGACACAAATCCATGTAGCAGTAGTGAAGAAAAACCATAA

Protein

MSLHLEEANETQQLMQNEGEDDEQKIPQSATSPVTSNKISSEAASLTSKNHEKVLTSTGNSLNESTKVSYVNERRLQRDFMRSNYTNRPKNIPKETPDVKNMEKALLELLDDFHTGKLSAFGSGCSMEQMINIRDQQEHLARLHFRLCADVDKPTEDNFENSASRDKMEQLVKSLEQLSNSIERLHCDTNPCSSSEEKP

Uniprot

A0A0L7LJZ0   A0A2H1X0Z7   A0A1E1W4P5   S4NSA3   A0A2A4K6G7   A0A194PRA4   + More
A0A194QMB9   A0A212F972   A0A0K8TQ10   A0A1W4X049   A0A139WHR7   Q177W5   D6WNN1   A0A1Y1M354   A0A182IE28   A0A1B0CHI8   A0A1Q3G255   A0A1I8MUS2   A0A1W4WZ34   V5I7T9   A0A182SY15   A0A1B0DKA0   A0A0Q9W9H0   Q9VQ84   N6UHR3   J3JTN5   A0A1I8NZW0   A0A0R1DNA8   A0A0Q5W8Q2   A0A0J9QU79   A0A1W4V6K0   A0A0K8VQ69   A0A0R3NXN8   A0A0Q9XDE0   Q7QG64   E4NKL4   A0A0Q9WQD3   A0A0R1DQB8   A0A0Q5W8V3   A0A0J9QUY5   A0A1W4UU79   A0A0R3NSD6   A0A1A9VI40   Q177W6   A0A0Q9WQ55   A0A1L8DCU1   A0A2P8XNK6  

Pubmed

26227816    23622113    26354079    22118469    26369729    18362917    + More
19820115    17510324    28004739    25315136    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    23537049    22516182    17550304    22936249    15632085    12364791    26109357    26109356    29403074   

EMBL

JTDY01000831    KOB75740.1    ODYU01012546    SOQ58932.1    GDQN01009096    JAT81958.1    + More
GAIX01014197    JAA78363.1    NWSH01000105    PCG79508.1    KQ459596    KPI95488.1    KQ461195    KPJ06677.1    AGBW02014626    AGBW02009620    OWR41315.1    OWR50305.1    GDAI01001618    JAI15985.1    KQ971342    KYB27540.1    CH477370    EAT42458.1    EFA03758.1    GEZM01044347    JAV78286.1    APCN01004556    AJWK01012410    GFDL01001163    JAV33882.1    GALX01005855    JAB62611.1    AJVK01006398    CH940649    KRF81385.1    AE014134    AAF51295.3    APGK01025446    KB740591    ENN80151.1    BT126592    KB632226    AEE61556.1    ERL90293.1    CM000157    KRJ97122.1    CH954177    KQS69984.1    CM002910    KMY87596.1    GDHF01011292    JAI41022.1    CH379060    KRT04127.1    CH933807    KRG02526.1    AAAB01008839    EAA05879.4    BT125811    ADR71720.1    AFH03522.1    CH963857    KRF98321.1    KRJ97123.1    KQS69985.1    KMY87594.1    KRT04129.1    EAT42457.1    KRF98319.1    GFDF01009808    JAV04276.1    PYGN01001658    PSN33514.1   

Proteomes

UP000037510    UP000218220    UP000053268    UP000053240    UP000007151    UP000192223    + More
UP000007266    UP000008820    UP000075840    UP000092461    UP000095301    UP000075901    UP000092462    UP000008792    UP000000803    UP000019118    UP000030742    UP000095300    UP000002282    UP000008711    UP000192221    UP000001819    UP000009192    UP000007062    UP000007798    UP000078200    UP000245037   

PRIDE

Q9VQ84    E4NKL4   

Pfam

PF13270   DUF4061        + More
PF04178   Got1

Interpro

IPR025271   DUF4061        + More
IPR020846   MFS_dom       
IPR007305   Vesicle_transpt_Got1/SFT2       

CDD

cd06174  MFS

ProteinModelPortal

A0A0L7LJZ0   A0A2H1X0Z7   A0A1E1W4P5   S4NSA3   A0A2A4K6G7   A0A194PRA4   + More
A0A194QMB9   A0A212F972   A0A0K8TQ10   A0A1W4X049   A0A139WHR7   Q177W5   D6WNN1   A0A1Y1M354   A0A182IE28   A0A1B0CHI8   A0A1Q3G255   A0A1I8MUS2   A0A1W4WZ34   V5I7T9   A0A182SY15   A0A1B0DKA0   A0A0Q9W9H0   Q9VQ84   N6UHR3   J3JTN5   A0A1I8NZW0   A0A0R1DNA8   A0A0Q5W8Q2   A0A0J9QU79   A0A1W4V6K0   A0A0K8VQ69   A0A0R3NXN8   A0A0Q9XDE0   Q7QG64   E4NKL4   A0A0Q9WQD3   A0A0R1DQB8   A0A0Q5W8V3   A0A0J9QUY5   A0A1W4UU79   A0A0R3NSD6   A0A1A9VI40   Q177W6   A0A0Q9WQ55   A0A1L8DCU1   A0A2P8XNK6  

KEGG

101738310    no KO assigned | (RefSeq) coiled-coil domain-containing protein 28B

GO

GO:0016192   GO:0016021   GO:0005813   GO:0060271  

Length:

199

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03011

outside

1  -  199

 

 

Pi

304.70276

Theta

216.176587

Tajima's D

1.335324

CLR

0.151008

CSRT

0.753862306884656

Interpretation

Uncertain