Gene

KWMTBOMO08769

Pre Gene Modal

BGIBMGA007891

Annotation

PREDICTED:_GTPase-activating_Rap/Ran-GAP_domain-like_protein_3_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr15(-):4760217-4798518      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.32 Mitochondrial   Reliability : 1.113 Nuclear   Reliability : 1.102

CDS

ATGCTGCCAACCTCCATTTCCGAATACGCCAACTCGTCGGCGAGTGAGCTGATAACAAGACGCGGCGTTTTTTCCAGACGACAATATGGTTCCGTTGAACAGTTATCAGGCACAAGCGACGGTGGTGGCGCTTTGGATGCAGTGGTGCGCCGTTACCGGCTCGAAAACGGAAACTCTCTCGGCGAAAAGGATGAATTGTTCGGACCGCCCAGCGCGCCCGTCCTTGAGAACCCTGAGTTCCAAACAAGATGGTACTTCAAATACTTTCTTGGTAAAATGCATCAGAATTACATCGGTGTCGATGGAGCGAGGGAGCCATATCTTCTCAGCGTTGTTCAGGAAGGGGGAGCAGGACTACTACGTGCCATACTTTTTAACAAAATGGGCGCACACAAAATATATTTGCCACCGAGTGCCTGGAGTGGAAGCGGTGGTCAAGCAACAAGGCCGACGGTAAAACAAATACTAGCCCAGTTTCCAGCTATGGAGAAAGTAGACAAAGTACCGAGAGAGATCACATGCGCCGAAATTCAGAAAGACGTTCTGCTGCTCGAAGAGCAAGAAGGCTCTGTGAACTTTAAAATAGGCGTGATGCTAATGAATCCAGGTCAGAAAACTGACGACGAGATGCTTTCGAACGAGAAGGGCGACGAGAAATGGGAACGATTTATTTCACTTTTGGGTGATAAAATTCGATTACGAGGATGGAACCGTTTCCGAGGCGGCCTCGACGTTAAAGGTGATATGACTGGCAGCCATTCCATTTACACGATGCATCAAGGACACGAAATTATGTTTCACGTCTCAACGATATTACCGTTTTCAAAGGATAACAAACAGCAGTTGGAAAGAAAACGGCATATTGGTAATGATATCGTGAATATAATTTTCTCGGATGACTCCGTCCACAATACCTTCAACCCGCAGTGCGTTAAAAGCCATTTCACGCATATTTTTGCCGTTGTATCTGAAGTGGAAGGAGCGGGATATAGGTTGAGTGTTTACAGCGATGACACGGTACCCCCATTTGGACCTTCGCTGCCTTGTCCCGCAATCTTCAGCGATCCCCAACTCTTCAGGGAATTTTTACTGGTGAAATTGATGAATGGAGAGAAAGCCGCGTTTCAAACTCCCACTTTTGCATTGAAACGACAAAGGACTCTTGATACATTGATAAGGGACATCTATGCAGAGCATTGTGCAGACCACAAAGTGCCCATGTTGTCACGACGCGCGCTCTCTGACGTCTGGTCCGGAGGTGCTGGGGCAGGAGCCGGGGCGGCGAGAACCGAAAGATTCTTACATGTTGGTCAAGCTCTTAAACTAGACGCGGTCTTAAGAGGCGACGCCCCAACCAGTCTTGTTTCTACAGGTTGCGGTGGCTTAAGACGTGCACCTTGGGAAGGTCGCGTGTGGAGAGCTGCTCCTCTTCCAGCATCTCCTGTTTGCGCTGAACAATTAGCAGAAGGACGACTACTCCTGTCTACTACCTCAAATACTTATATTTTAGAAGAAAGTGGAACTACACGCGTAGTCCTCAGATGGGAAGGTTGCGTGCGTGCGGCGCGTGTGAGCGAACGCGCTGGCTTGTTCCGCGTTGGAGCGCGTGTTGTGGCAGGCGGGGGCTCGACCACGGGAGGGGCCGGCGGTGCGGGATTGTACGCGCTACCACTGCCCGAACTCTGCGCCGGCGCCTGGGCAATGCGACCGCTGCAGGACTGTAAACACGCACGACTGCCGCGTACCAAGACCGCTCAATACTTCGATGTCCTGGAGTCAGTTAACGGAAATAAGACAACACTAGCAATAGCAGTCGGTAGAAGAGTGATGCTCATGATCGAAGAAGTTAAGGCTGACTATGAAATGGGATTCGAGTACGTACATATCAAGGACATTCAATTAAGCGAAACGCCGACCCTCATCAAGCTGATGGACGGTGAAGTTGAAACAATGGTGGTCGGCTACAAACACCATTGGGAGATTCTCGACACAAACAGTGGCCAAGGTGTGAAAAGAGCCGAAAATTCCGAAGACCCTGGAACCCGACGCGGGACTCTAGTCAATGCTCTGAGGATTGGCGACGAAAGAGACGGACAAATTGTATTATGTTACAATCATACATGTCACTTTGAGAGGCTGACAAGCAAAGGATTAGAGAGCGACGGAGAATATGACTTTCATTGGACCACAGTTCCTGCTGCTATCGTTTGTGCTTTTCCATACATAATGGCCTTCGCGGAAGATTTACTGGAGATACGATTAGTGGCAAACGGTTCTCTGGTGCACGCAGCCTGCATACCGGGCTTAAAGCTTCTGTGCGGACGAATGGATATATTCTACGTGGCCTGTGCTCCGGAATACGTACCATTGAGCCGTGAGATAGACCCGTGCTTGAGTCTGCACGACTACGAACTAGTCAAGCAGATGAACAAACAGAGCGGCCCGTATTCACTGGATGAAGATGAAAACCACGAAAATAAAGGCGACGCGGCTCATGCGAATCGAACATCCGAAGACAACTCAGCCTCGAGCAGAAGCAGCTCTATATCATCAGAACAGGAGAACATTAGGCCTCCCTTACAAAGGATGGCGCCTATATCACCGCCTACGTCACCCCAAGTAATGCCAGAGAATAGTCGTTGCGTGCGTATTTACAAAATACCACAGAGTAACCTCAGCGCGGGAACTTACCAAAGACAGTCCGTGTCAGCCGATCAAGTCGTCACCTCCTACTTTCCAGACAGACCGAACAGCATCAGACAGAGACTAGCGGAGTTGAGATTAGACAGCAAGTCTAGGGGAGGAGGCGATGACGAAAATTTGTGA

Protein

MLPTSISEYANSSASELITRRGVFSRRQYGSVEQLSGTSDGGGALDAVVRRYRLENGNSLGEKDELFGPPSAPVLENPEFQTRWYFKYFLGKMHQNYIGVDGAREPYLLSVVQEGGAGLLRAILFNKMGAHKIYLPPSAWSGSGGQATRPTVKQILAQFPAMEKVDKVPREITCAEIQKDVLLLEEQEGSVNFKIGVMLMNPGQKTDDEMLSNEKGDEKWERFISLLGDKIRLRGWNRFRGGLDVKGDMTGSHSIYTMHQGHEIMFHVSTILPFSKDNKQQLERKRHIGNDIVNIIFSDDSVHNTFNPQCVKSHFTHIFAVVSEVEGAGYRLSVYSDDTVPPFGPSLPCPAIFSDPQLFREFLLVKLMNGEKAAFQTPTFALKRQRTLDTLIRDIYAEHCADHKVPMLSRRALSDVWSGGAGAGAGAARTERFLHVGQALKLDAVLRGDAPTSLVSTGCGGLRRAPWEGRVWRAAPLPASPVCAEQLAEGRLLLSTTSNTYILEESGTTRVVLRWEGCVRAARVSERAGLFRVGARVVAGGGSTTGGAGGAGLYALPLPELCAGAWAMRPLQDCKHARLPRTKTAQYFDVLESVNGNKTTLAIAVGRRVMLMIEEVKADYEMGFEYVHIKDIQLSETPTLIKLMDGEVETMVVGYKHHWEILDTNSGQGVKRAENSEDPGTRRGTLVNALRIGDERDGQIVLCYNHTCHFERLTSKGLESDGEYDFHWTTVPAAIVCAFPYIMAFAEDLLEIRLVANGSLVHAACIPGLKLLCGRMDIFYVACAPEYVPLSREIDPCLSLHDYELVKQMNKQSGPYSLDEDENHENKGDAAHANRTSEDNSASSRSSSISSEQENIRPPLQRMAPISPPTSPQVMPENSRCVRIYKIPQSNLSAGTYQRQSVSADQVVTSYFPDRPNSIRQRLAELRLDSKSRGGGDDENL

Uniprot

A0A3S2LGF1   A0A2A4K826   A0A212F5N3   A0A194QNX4   A0A194PPW4   A0A2H1WSL7   + More
A0A0L7LGC1   D6X4H2   A0A1Y1LP53   N6UBU0   A0A1S4GFY5   A0A1B6CQF3   A0A1A9YF06   A0A1A9W663   A0A0N8CXN9   A0A0P5U122   A0A0P5MR75   A0A0P5XI86   A0A0P5BT37   A0A0P5APE2   A0A0P5HCH8   A0A0P6G3Y6   A0A0N7ZMD5   A0A0P5BUP2   A0A182NRK1   A0A182K2M4   A0A182P074   A0A182Y6G1   A0A2R5L7B5   A0A0N8B8Y4   A0A0P5DG54   A0A0P5ZU72   A0A0P5MN85   A0A0N8CF21   A0A0P5JLY8   A0A0P5N1Z7   A0A0P5DDN9   A0A182FNV2   A0A0P5YBK6   A0A0P5WIK0   A0A0P5DNG2   A0A0P4ZZ10   A0A0P4YLY3   A0A0P5APE8   A0A0P4ZU07   A0A0P6C9K7   A0A0P4YQY5   A0A0P5E9M7   A0A0P5ZEZ8   A0A0N8AV79   A0A0P5UFD6   A0A0P5I1D6   A0A0P5AS00   A0A0P5EM46   A0A0P4Z8S0   A0A0P5GJ39   A0A0P6G2Y6   A0A0P5GQ29   A0A0P5MWL3   A0A0P5H3G5   A0A0P5N9C6   A0A0P5GU18   A0A0P5C3U6   A0A0P5CQJ2   A0A0P5GPY1   A0A0P5Y353   A0A0L7R3H3   W8AJE0   W8ARH1   A0A0N8D6A8   A0A0N8ENH6   A0A0N8AS84   A0A0P5E442   A0A131XWH6   A0A0P5KDG2   A0A0P5XCV1   A0A1E1X2G8   A0A147BU33   A0A195BSP9   A0A224YZV7   L7MIC4   A0A131YVM2   A0A224YYD8   L7M290   L7MIV6   L7LV71   A0A084WRI6   A0A131YCS5   A0A131XDQ9   A0A0C9R0T7   A0A310SPI2   A0A0P5IPC8   A0A067R3L1   A0A023F5M3   A0A293LI75   A0A0C9RSB3   A0A1B0A0Z0   A0A1E1XMI0   A0A151XAU7  

Pubmed

22118469    26354079    26227816    18362917    19820115    28004739    + More
23537049    12364791    25244985    24495485    28503490    29652888    28797301    25576852    26830274    24438588    28049606    24845553    25474469    29209593   

EMBL

RSAL01000014    RVE53272.1    NWSH01000054    PCG80156.1    AGBW02010169    OWR49038.1    + More
KQ461195    KPJ06675.1    KQ459596    KPI95486.1    ODYU01010694    SOQ55972.1    JTDY01001315    KOB74231.1    KQ971380    EEZ97268.2    GEZM01054824    JAV73376.1    APGK01041016    KB740987    ENN76122.1    AAAB01008859    GEDC01021539    JAS15759.1    GDIP01088735    JAM14980.1    GDIP01119272    JAL84442.1    GDIQ01152504    JAK99221.1    GDIP01071828    JAM31887.1    GDIP01195315    JAJ28087.1    GDIP01196367    JAJ27035.1    GDIQ01229780    JAK21945.1    GDIQ01057346    JAN37391.1    GDIP01231257    JAI92144.1    GDIP01180364    JAJ43038.1    GGLE01001252    MBY05378.1    GDIQ01201187    JAK50538.1    GDIP01162213    JAJ61189.1    GDIP01039438    GDIQ01030324    JAM64277.1    JAN64413.1    GDIQ01161054    GDIQ01136421    GDIP01089833    JAK90671.1    JAM13882.1    GDIP01138079    JAL65635.1    GDIQ01201188    JAK50537.1    GDIQ01152453    JAK99272.1    GDIP01157871    JAJ65531.1    GDIQ01152455    GDIP01062033    JAK99270.1    JAM41682.1    GDIP01085526    JAM18189.1    GDIP01157215    JAJ66187.1    GDIP01206216    JAJ17186.1    GDIP01225912    JAI97489.1    GDIP01196368    JAJ27034.1    GDIP01207916    JAJ15486.1    GDIP01003769    JAM99946.1    GDIP01225911    JAI97490.1    GDIP01163068    JAJ60334.1    GDIP01044585    GDIQ01039251    JAM59130.1    JAN55486.1    GDIQ01239627    JAK12098.1    GDIP01113788    JAL89926.1    GDIQ01242631    JAK09094.1    GDIP01195316    JAJ28086.1    GDIQ01267447    JAJ84277.1    GDIP01216410    JAJ06992.1    GDIQ01243872    JAK07853.1    GDIQ01039250    JAN55487.1    GDIQ01241230    JAK10495.1    GDIQ01152454    JAK99271.1    GDIQ01239628    JAK12097.1    GDIQ01152505    JAK99220.1    GDIQ01242630    JAK09095.1    GDIP01176368    JAJ47034.1    GDIP01167066    GDIQ01044356    JAJ56336.1    JAN50381.1    GDIQ01238038    JAK13687.1    GDIP01064582    JAM39133.1    KQ414663    KOC65369.1    GAMC01017920    JAB88635.1    GAMC01017918    JAB88637.1    GDIP01064583    JAM39132.1    GDIQ01009460    JAN85277.1    GDIQ01247987    JAK03738.1    GDIP01147327    JAJ76075.1    GEFM01004397    JAP71399.1    GDIQ01211536    JAK40189.1    GDIP01075576    JAM28139.1    GFAC01005741    JAT93447.1    GEGO01001085    JAR94319.1    KQ976419    KYM89307.1    GFPF01008196    MAA19342.1    GACK01001487    JAA63547.1    GEDV01005284    JAP83273.1    GFPF01008197    MAA19343.1    GACK01006884    JAA58150.1    GACK01001940    JAA63094.1    GACK01009532    JAA55502.1    ATLV01026094    ATLV01026095    ATLV01026096    KE525406    KFB52830.1    GEDV01012209    JAP76348.1    GEFH01002867    JAP65714.1    GBYB01004921    GBYB01006527    GBYB01010067    JAG74688.1    JAG76294.1    JAG79834.1    KQ761976    OAD56430.1    GDIQ01211537    JAK40188.1    KK852927    KDR13691.1    GBBI01002250    JAC16462.1    GFWV01002819    MAA27549.1    GBYB01010276    JAG80043.1    GFAA01003011    JAU00424.1    KQ982335    KYQ57511.1   

Proteomes

UP000283053    UP000218220    UP000007151    UP000053240    UP000053268    UP000037510    + More
UP000007266    UP000019118    UP000092443    UP000091820    UP000075884    UP000075881    UP000075885    UP000076408    UP000069272    UP000053825    UP000078540    UP000030765    UP000027135    UP000092445    UP000075809   

Pfam

PF02145   Rap_GAP        + More
PF00780   CNH

Interpro

IPR001180   CNH_dom        + More
IPR035974   Rap/Ran-GAP_sf       
IPR000331   Rap_GAP_dom       

SUPFAM

SSF111347   SSF111347       

Gene 3D

3.40.50.11210    

ProteinModelPortal

A0A3S2LGF1   A0A2A4K826   A0A212F5N3   A0A194QNX4   A0A194PPW4   A0A2H1WSL7   + More
A0A0L7LGC1   D6X4H2   A0A1Y1LP53   N6UBU0   A0A1S4GFY5   A0A1B6CQF3   A0A1A9YF06   A0A1A9W663   A0A0N8CXN9   A0A0P5U122   A0A0P5MR75   A0A0P5XI86   A0A0P5BT37   A0A0P5APE2   A0A0P5HCH8   A0A0P6G3Y6   A0A0N7ZMD5   A0A0P5BUP2   A0A182NRK1   A0A182K2M4   A0A182P074   A0A182Y6G1   A0A2R5L7B5   A0A0N8B8Y4   A0A0P5DG54   A0A0P5ZU72   A0A0P5MN85   A0A0N8CF21   A0A0P5JLY8   A0A0P5N1Z7   A0A0P5DDN9   A0A182FNV2   A0A0P5YBK6   A0A0P5WIK0   A0A0P5DNG2   A0A0P4ZZ10   A0A0P4YLY3   A0A0P5APE8   A0A0P4ZU07   A0A0P6C9K7   A0A0P4YQY5   A0A0P5E9M7   A0A0P5ZEZ8   A0A0N8AV79   A0A0P5UFD6   A0A0P5I1D6   A0A0P5AS00   A0A0P5EM46   A0A0P4Z8S0   A0A0P5GJ39   A0A0P6G2Y6   A0A0P5GQ29   A0A0P5MWL3   A0A0P5H3G5   A0A0P5N9C6   A0A0P5GU18   A0A0P5C3U6   A0A0P5CQJ2   A0A0P5GPY1   A0A0P5Y353   A0A0L7R3H3   W8AJE0   W8ARH1   A0A0N8D6A8   A0A0N8ENH6   A0A0N8AS84   A0A0P5E442   A0A131XWH6   A0A0P5KDG2   A0A0P5XCV1   A0A1E1X2G8   A0A147BU33   A0A195BSP9   A0A224YZV7   L7MIC4   A0A131YVM2   A0A224YYD8   L7M290   L7MIV6   L7LV71   A0A084WRI6   A0A131YCS5   A0A131XDQ9   A0A0C9R0T7   A0A310SPI2   A0A0P5IPC8   A0A067R3L1   A0A023F5M3   A0A293LI75   A0A0C9RSB3   A0A1B0A0Z0   A0A1E1XMI0   A0A151XAU7  

PDB

1SRQ     E-value=1.12066e-48,     Score=491

KEGG

101738855    no KO assigned | (RefSeq) GTPase-activating Rap/Ran-GAP domain-like protein 3

GO

GO:0051056   GO:0005096   GO:0016021   GO:0043565   GO:0006811   GO:0016020   GO:0005509   GO:0050793   GO:0003676   GO:0016876   GO:0043039  

Length:

941

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.16286

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00043

outside

1  -  941

 

 

Pi

288.831845

Theta

188.261446

Tajima's D

1.148521

CLR

0.508234

CSRT

0.697715114244288

Interpretation

Uncertain