SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08756
Pre Gene Modal
BGIBMGA007679
Annotation
PREDICTED:_uncharacterized_protein_LOC106129367_isoform_X3_[Amyelois_transitella]
Location in the cell
Cytoplasmic   Reliability : 2.054 Nuclear   Reliability : 1.833
 

Sequence

CDS
ATGTATGTACAGCGATATGCTGCTATTGTCGACTGTCTACTGGACGAACGGTGGAGCGGAAAATTGGATAAGGTGGTAGACCTTGGTTACCATGATATGAGTTTCATTAAGTACCTGAAGGAAGTTTCCGGAATCAAGTCAATTTTGGGAGTTGATCTTGAGACTATACCATTGCAGTGCTCATCAGACTTGTTGAGTTGTAATGAGTATGCACCTAAAAGAGAAACACCATTACAAATTTCACTGCTCCAAGGCAATGCAGCAGACCCAGATTACAGACTTATTGGTTGTGATGCAGTCATAGCCATAGAAATGATAGAACATATGCTACCTCATGACCTGGAACGACTTGTACACACTGTGTTTGCATTTATCAAACCATGGATTGTCATTTTTACCACACCAAATGGTGATTTCAATGTACTGTTCAAATCATTAGAAAAAAATGGCTTGAGAAGGCTCGATCATTTTTTTGAATGGAGCAGAGATCAATTTCATGATTGGTGCAGTAATATAGTTACAAGATACCCTGAATATACAGTTTCATGCAGAGGTATAGGACCTGGGCCCGAAGGCACAGAGCATCTAGGCTGCTGCAGTCAAATGGCTCTGTTTGTTTCTAAGAACTATCATAAACAAAAAGATTTGAATCTCAATAGTTTAGCATTAGTCGCTAATGATTCTGTTCCTAATGATCTAAGTGACGTGATTGATAATTGGGAGAGCCCAGAATTGATGACGGAGATGATGATTTATCCAGTTAATAAATTGAACTGTACGACGCTGCAAGTTAAGAAATTCTCTAAAACAACACAAGGTTTGATGGCGAAGAATAAAGTGGATGCTTTAGTTCACACAAGGGAAGTAGTGGAGGAAATTAAACATCTCACGAAAATGTTAAATTTTAATAAAAGCGGCTTGAATCAACAAGATGAGAAAACGCACATTTGGTATAATTTCAACTGGGGAGAGAACGCGCCGTATTGGAATCAGTATTATAAAATTGTTCGAGAATATAATTATCCATTTGAGACTAAATCAGACGACTGCCGCATTCTGGACTTGATATCGGATGAGATGAATAGACTGATAGATTTACAATATGATGATATATTATCTGTTGATTTAAACAAATTGGAGATTCCACTGCAGCATCTGATGCAGACAGTTCAACATATAACCGATGATGTGGAGAAAGTGAGAGAACTTTTAGAATGGAACGGATATGAAGTCGTTGATGACATGGTGATATATTCAAGATTGGCTATCGACAATGTTACTATCGATTCACAAATTGACGACTGGCAAGAAAACGAATCAGTATCGGATGTAAAGAAATTTAATTAG
Protein
MYVQRYAAIVDCLLDERWSGKLDKVVDLGYHDMSFIKYLKEVSGIKSILGVDLETIPLQCSSDLLSCNEYAPKRETPLQISLLQGNAADPDYRLIGCDAVIAIEMIEHMLPHDLERLVHTVFAFIKPWIVIFTTPNGDFNVLFKSLEKNGLRRLDHFFEWSRDQFHDWCSNIVTRYPEYTVSCRGIGPGPEGTEHLGCCSQMALFVSKNYHKQKDLNLNSLALVANDSVPNDLSDVIDNWESPELMTEMMIYPVNKLNCTTLQVKKFSKTTQGLMAKNKVDALVHTREVVEEIKHLTKMLNFNKSGLNQQDEKTHIWYNFNWGENAPYWNQYYKIVREYNYPFETKSDDCRILDLISDEMNRLIDLQYDDILSVDLNKLEIPLQHLMQTVQHITDDVEKVRELLEWNGYEVVDDMVIYSRLAIDNVTIDSQIDDWQENESVSDVKKFN

Summary

Pfam
PF00003   7tm_3        + More
PF01094   ANF_receptor
Interpro
IPR026610   Hen1        + More
IPR029063   SAM-dependent_MTases       
IPR002455   GPCR3_GABA-B       
IPR028082   Peripla_BP_I       
IPR001828   ANF_lig-bd_rcpt       
IPR017978   GPCR_3_C       
IPR002456   GPCR_3_GABA_rcpt_B1       
SUPFAM
SSF53335   SSF53335        + More
SSF53822   SSF53822       
PDB
5WY0     E-value=3.22686e-30,     Score=329

Ontologies

Topology

Length:
448
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.43821
Exp number, first 60 AAs:
0.00021
Total prob of N-in:
0.03680
outside
1  -  448
 
 

Population Genetic Test Statistics

Pi
195.933544
Theta
182.243995
Tajima's D
0.618668
CLR
0.480262
CSRT
0.546522673866307
Interpretation
Uncertain
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