SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08754  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007899
Annotation
peritrophin-1-like_precursor_[Papilio_xuthus]
Location in the cell
Extracellular   Reliability : 3.658
 

Sequence

CDS
ATGAGAGTGTTCATCGTATTGACGGCAGTCGCTGCAATTGCAAGCGCCCAATTCAAGTGCCCCGCTAAAGACGGCCAGTATGAAGACGACAGACAATGCGACAAGTTCTTCGAATGTGTCGATGGAGTCGCCACAACCAAGCTCTGCCCGGACGGTCTTGTGTTCGACCCTACTATCAGGAAGATCAACAAATGCGACCAGCCCTTCAACGTAGACTGCGGCGATAGGACTGAACTCCAGCCCCCCAAGCCCAACTCACAATGTCCCCGCCGCAATGGATTCTTTGCCCATCCCGACCCCTCTGTGTGCAACATCTTCTACAACTGCATCGAAGGTGAAGCCACCGAGGTCAAGTGTACCGCCGGCCTTCACTTCGACGAGTACTCCGGTACCTGCGTCTGGCCCGATTCCGCCGGAAGACAAGGATGTAACGAACAACAAAAAAAAACAAAGGACGGCTTCGAGTGCCCCAAAGAGCAGCTGGTTGATGCCCAAGGACAGATCGTCGCTCACCCCAAGTTCCCCCACCCCAACGACTGCCAACGTTTCTACGTATGCCTGAACGGTGTCGAGCCCCGTGACCTCGGCTGCCAAGTCGGAGAGGTTTATAACGAAGAGAGCCAGAAATGCGATGCGCCTGAGAACGTTCGCGGATGCGAGGACTGGTACAAGGACTCTGAGGAAGCCGCACCAGGACCCAAATCGAGATCTTAA
Protein
MRVFIVLTAVAAIASAQFKCPAKDGQYEDDRQCDKFFECVDGVATTKLCPDGLVFDPTIRKINKCDQPFNVDCGDRTELQPPKPNSQCPRRNGFFAHPDPSVCNIFYNCIEGEATEVKCTAGLHFDEYSGTCVWPDSAGRQGCNEQQKKTKDGFECPKEQLVDAQGQIVAHPKFPHPNDCQRFYVCLNGVEPRDLGCQVGEVYNEESQKCDAPENVRGCEDWYKDSEEAAPGPKSRS

Summary

EMBL
BABH01003008    AK401188    BAM17810.1    KQ459596    KPI95470.1    AK402328    + More
BAM18950.1    NWSH01000845    PCG73874.1    KZ150017    PZC74958.1    ODYU01006835    SOQ49047.1    KQ461195    KPJ06662.1    AGBW02011497    OWR46555.1    RSAL01000014    RVE53257.1    JF777368    AEU11713.1    JF777375    AEU11720.1    JTDY01003940    KOB68801.1    JF777367    AEU11712.1    GU128092    KQ971379    ACY95475.1    EEZ97329.1    JF777370    AEU11715.1    JF777372    AEU11717.1    GAMD01001601    JAA99989.1    ATLV01013557    KE524867    KFB38103.1    JF777379    AEU11724.1    CH477855    EAT35608.1    JF777371    AEU11716.1    AAAB01008811    APCN01004770    JF777369    AEU11714.1    JF777380    AEU11725.1    JF777377    AEU11722.1    JF777378    AEU11723.1    JF777374    AEU11719.1    JF777373    AEU11718.1    GAPW01003911    JAC09687.1    GFDL01005606    JAV29439.1    JF777376    AEU11721.1    EAA04933.5    DS231818    EDS41312.1    ADMH02000984    ETN64512.1    GFDF01000856    JAV13228.1    GFDF01000855    JAV13229.1    JXUM01055320    KQ561861    KXJ77304.1    AXCN02002174    KM099158    AJZ68819.1    MG601672    AYA49997.1    AJWK01008709    AJWK01008710    APGK01031880    APGK01031881    APGK01031882    APGK01031883    BT128150    KB740829    AEE63111.1    ENN78823.1    KB632205    ERL90117.1    ADTU01013619    ADTU01013620    QOIP01000001    RLU27143.1    GL446149    EFN88444.1    KQ759804    OAD62822.1    KK852869    KDR14646.1    KQ981490    KYN41289.1    PYGN01000257    PSN49911.1    GBYB01010786    JAG80553.1    GEZM01082209    JAV61403.1    GL888103    EGI67437.1    GL435707    EFN72831.1    CCAG010000243    JXJN01001544    JXJN01001545    CH933814    EDW05546.1    GDAI01001867    JAI15736.1    AJVK01004584    AXCM01000244    GDHC01009916    JAQ08713.1    GBHO01016842    JAG26762.1    JRES01001419    KNC23071.1    KY031115    ATU82866.1    CM000162    EDX02983.1    AE014298    BT001512    AAF50927.2    AAN71267.1    AFH07490.1    GFTR01004118    JAW12308.1    CH940655    KRF82549.1    CH954180    EDV46788.1    GEDC01004272    JAS33026.1    GEMB01000885    GEMB01000884    JAS02256.1    CH916370    EDW00003.1    NNAY01003378    OXU19517.1    OUUW01000003    SPP78494.1    EDW66043.1    CP012528    ALC50027.1    CH379064    EAL31995.2    CH479192    EDW26563.1    NEVH01020330    PNF21872.1    KA644777    AFP59406.1    GBBI01000919    JAC17793.1    GDKW01003864    JAI52731.1   
Pfam
PF01607   CBM_14
Interpro
IPR036508   Chitin-bd_dom_sf        + More
IPR002557   Chitin-bd_dom       
SUPFAM
SSF57625   SSF57625       
PDB
6G9E     E-value=1.34878e-08,     Score=139

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.999154
 
 
Length:
237
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.04168
Exp number, first 60 AAs:
0.04168
Total prob of N-in:
0.04044
outside
1  -  237
 
 

Population Genetic Test Statistics

Pi
219.532
Theta
190.377969
Tajima's D
0.019917
CLR
0.093516
CSRT
0.373131343432828
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
29197581 QCDKFFECVDGVATTK 100.00 2e-14
24093152 NGDIVQGSYSIVEPDGTR 100.00 1e-13
29197581 INKCDQPFNVDCGDR 100.00 1e-13
28467696 CDQPFNVDCGDR 96.15 4e-12
29197581 CDQPFNVDCGDR 96.15 4e-12
28467696 DGQVSEAGSYQHIIEK 100.00 1e-10
29197581 DGFECPKEQIVDAQGQIVAHPK 100.00 1e-10
28467696 TIYVPVPR 95.83 3e-10
24402669 DIGCQVGEVYNEESQK 95.83 4e-10
28467696 DIGCQVGEVYNEESQK 95.83 4e-10
29197581 DIGCQVGEVYNEESQK 95.83 4e-10
28467696 CTAEGNDFKK 95.45 4e-10
29197581 CDQPFNVDCGDRTEIQPPKPNSQCPR 95.45 4e-10
24402669 DGDYQAYASTNSDTNR 95.45 8e-09
28467696 DGEGQTIVIDPTR 95.45 8e-09
29197581 DGFECPK 95.45 8e-09
28467696 GCCNACEKPIVGQVITAIGR 100.00 6e-06
29197581 FYVCINGVEPR 100.00 6e-06
29197581 NGFFAHPDPSVCNIFYNCIEGEATEVK 100.00 9e-05
29197581 ICPDGIVFDPTIRK 100.00 2e-04
28467696 CDQGYGGNPYIECKPQFAQECYVDADCPSR 100.00 0.017
29197581 SPIDIVVIQHTVSNDCFTDEECIISVNSIR 100.00 0.017
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