Gene

KWMTBOMO08753  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007900

Annotation

chondroitin_proteoglycan-2-like_precursor_[Papilio_xuthus]

Location

Bomo_Chr15(-):4229951-4241260      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.903

CDS

ATGAAAAGTTTAATAGTACTAGGGTTGGCTGTTTGTGGATTAGTTTCAGGCCAAGAATTCAAATGCCCGGACAAGAGCGGCTTCTACCCGGACCCGTATCAATGTGACCTTTATTACAAATGCAGCAGAGGAGATGCAGAAGAGAAGCTGTGTCCTGATGGTCTCGTGTTCTCAGATGAAAACCCCAACAAAGAACACTGTGATATCCCTTCTAACGTCGACTGCGGCGACAGAAAGGAGCTACAAGAACCTAAACCATCGAAGGGCTGCCCTCGTCAAAACGGATACTTTAAACATCCTGACCCACAGGCCTGCGATAAATTCCACTACTGCGCTGATGGTATTCCCAACGAGCTTCCGTGTCCTCCAGGACTGTACTTTGACGAAGAGACCTCCAACTGCGACTGGAAAGAAGTAGTCAACAGGCAATGCGACCAAATCACAAAAGATGTTTTGGATGATGGTTTCACCTGTCCCGACGGCGAGGTCATGGGCCCCAACGGCCGCTCCTTACCCCACCCCACTTTCCCCCACCCCGAAGACTGCCAGAAGTTCTATATCTGCCGTAACGGAGTCCAACCGCAAAAGGGAAGCTGTCCATCCGGGAAGGTCTACAATGAGGATACGTTCATGTGCGACGATCCCGAAAAAGTTGTTGGATGTGAAAACTACTACGACGGACAGCCACTTGACAAGAACAAGCTTCCCAAGAAGGCGTAA

Protein

MKSLIVLGLAVCGLVSGQEFKCPDKSGFYPDPYQCDLYYKCSRGDAEEKLCPDGLVFSDENPNKEHCDIPSNVDCGDRKELQEPKPSKGCPRQNGYFKHPDPQACDKFHYCADGIPNELPCPPGLYFDEETSNCDWKEVVNRQCDQITKDVLDDGFTCPDGEVMGPNGRSLPHPTFPHPEDCQKFYICRNGVQPQKGSCPSGKVYNEDTFMCDDPEKVVGCENYYDGQPLDKNKLPKKA

Uniprot

H9JEF3   I4DJ44   A0A3S2NZP3   A0A194QSZ5   A0A2H1W7G7   A0A212EYI4   + More
A0A2A4JP85   A0A2W1BNU5   A0A069DPZ6   A0A023F984   A0A2P8Z0B8   A0A2S1ZS45   A0A067QYQ5   A0A1B6HUP9   A0A1B6D180   A0A1Y1NL60   A0A0A9WAZ2   D1MAI5   A0A146LAW5   A0A2J7PZW4   R4WJR8   A0A0F6PN07   A0A1W4XCC5   A0A0A9W8D0   E2B782   F4WEF1   A0A158NER8   A0A2S2Q042   A0A2S2NVZ4   A0A0T6AUY5   A0A154PD68   A0A1S3DGK4   J9JZY1   A0A195FLJ7   R4G5Z9   A0A0L7QP93   A0A195DZL8   A0A3L8E3L9   K7IMV2   A0A232EME2   A0A195AVM1   A0A0J7KJS7   E9IQV8   A0A0C9QWL8   A0A151XIU6   A0A195CR50   A0A026WG30   T1I1T4   A0A0N0BK39   A0A1D2MYL9   A0A087ZT03   A0A1Q3FPB3   B0W0L0   A0A1S4FMS0   Q16VF5   Q178G5   I4DIS0   A0A194PWG1   A0A2H1W7M0   A0A182V3S0   I4DM10   A0A1W7R8Z4   A0A1Y1KJ01   A0A084VJG1   J9K501   A0A1Y9GLC3   A0A2W1BJB4   Q7PFC5   A0A084VJF9   A0A2A4JQJ5   B0W0L2   A0A023EKL3   A0A2S2NBZ9   A0A1S4GAI5   A0A1Y9GLX8   A0A067R898   A0A2K8JM15   A0A1Q3FPL7   A0A2P8Z085   A0A1B6M0M6   A0A2H8TR84   Q7QHZ7   D1MAI4   Q16MN2   A0A1B6L5Z3   A0A1B6E3P5   A0A182J939   A0A224XR67   H9JEF2   T1DJ78   A0A1I8JUT6   A0A182W553   A0A2S1ZS47   A0A1I8JUR0   A0A1B6FE13   A0A182W552   A0A158NER9   A0A1B6E516   A0A182SH98  

Pubmed

19121390    22651552    26354079    22118469    28756777    26334808    + More
25474469    29403074    29712872    24845553    28004739    25401762    18362917    20144715    19820115    26823975    23691247    20798317    21719571    21347285    30249741    20075255    28648823    21282665    24508170    27289101    17510324    24438588    12364791    14747013    17210077    24945155   

EMBL

BABH01003009    AK401312    KQ459596    BAM17934.1    KPI95469.1    RSAL01000014    + More
RVE53256.1    KQ461195    KPJ06661.1    ODYU01006835    SOQ49045.1    AGBW02011497    OWR46556.1    NWSH01000845    PCG73875.1    KZ150017    PZC74957.1    GBGD01002741    JAC86148.1    GBBI01001153    JAC17559.1    PYGN01000257    PSN49920.1    MF942760    AWK28283.1    KK852869    KDR14645.1    GECU01029308    JAS78398.1    GEDC01017850    JAS19448.1    GEZM01003873    JAV96507.1    GBHO01039941    JAG03663.1    GU128093    KQ971379    ACY95476.1    EEZ97330.1    GDHC01014293    JAQ04336.1    NEVH01020330    PNF21871.1    AK417835    BAN21050.1    KM099159    AJZ68820.1    GBHO01039943    GDHC01004434    JAG03661.1    JAQ14195.1    GL446149    EFN88443.1    GL888103    EGI67438.1    ADTU01013618    GGMS01001841    MBY71044.1    GGMR01008731    MBY21350.1    LJIG01022743    KRT78947.1    KQ434867    KZC09150.1    ABLF02036175    KQ981490    KYN41288.1    GAHY01000075    JAA77435.1    KQ414821    KOC60450.1    KQ979999    KYN18318.1    QOIP01000001    RLU27142.1    NNAY01003378    OXU19516.1    KQ976736    KYM76107.1    LBMM01006569    KMQ90501.1    GL764974    EFZ17045.1    GBYB01000105    JAG69872.1    KQ982080    KYQ60235.1    KQ977381    KYN03181.1    KK107260    EZA53994.1    ACPB03005154    KQ435709    KOX80018.1    LJIJ01000399    ODM97884.1    GFDL01005606    JAV29439.1    DS231818    EDS41312.1    CH477594    EAT38548.1    CH477365    EAT42533.1    AK401188    BAM17810.1    KPI95470.1    SOQ49047.1    AK402328    BAM18950.1    GEHC01000070    JAV47575.1    GEZM01082209    JAV61403.1    ATLV01013558    KE524867    KFB38105.1    APCN01004769    APCN01004770    PZC74958.1    AAAB01008811    EAA45375.2    ATLV01013557    KFB38103.1    PCG73874.1    EDS41314.1    GAPW01003911    JAC09687.1    GGMR01001853    MBY14472.1    KDR14646.1    KY031115    ATU82866.1    GFDL01005593    JAV29452.1    PSN49911.1    GEBQ01010488    JAT29489.1    GFXV01004909    MBW16714.1    EAA04933.5    GU128092    ACY95475.1    EEZ97329.1    CH477855    EAT35608.1    GEBQ01020891    JAT19086.1    GEDC01004779    JAS32519.1    GFTR01004118    JAW12308.1    BABH01003008    GAMD01001601    JAA99989.1    MF942759    AWK28282.1    GECZ01021342    JAS48427.1    ADTU01013619    ADTU01013620    GEDC01004272    JAS33026.1   

Proteomes

UP000005204    UP000053268    UP000283053    UP000053240    UP000007151    UP000218220    + More
UP000245037    UP000027135    UP000007266    UP000235965    UP000192223    UP000008237    UP000007755    UP000005205    UP000076502    UP000079169    UP000007819    UP000078541    UP000053825    UP000078492    UP000279307    UP000002358    UP000215335    UP000078540    UP000036403    UP000075809    UP000078542    UP000053097    UP000015103    UP000053105    UP000094527    UP000005203    UP000002320    UP000008820    UP000075903    UP000030765    UP000075840    UP000007062    UP000075880    UP000075900    UP000075920    UP000075901   

PRIDE

H9JEF3    H9JEF2   

Pfam

PF01607   CBM_14

Interpro

IPR036508   Chitin-bd_dom_sf        + More
IPR002557   Chitin-bd_dom       

SUPFAM

SSF57625   SSF57625       

ProteinModelPortal

H9JEF3   I4DJ44   A0A3S2NZP3   A0A194QSZ5   A0A2H1W7G7   A0A212EYI4   + More
A0A2A4JP85   A0A2W1BNU5   A0A069DPZ6   A0A023F984   A0A2P8Z0B8   A0A2S1ZS45   A0A067QYQ5   A0A1B6HUP9   A0A1B6D180   A0A1Y1NL60   A0A0A9WAZ2   D1MAI5   A0A146LAW5   A0A2J7PZW4   R4WJR8   A0A0F6PN07   A0A1W4XCC5   A0A0A9W8D0   E2B782   F4WEF1   A0A158NER8   A0A2S2Q042   A0A2S2NVZ4   A0A0T6AUY5   A0A154PD68   A0A1S3DGK4   J9JZY1   A0A195FLJ7   R4G5Z9   A0A0L7QP93   A0A195DZL8   A0A3L8E3L9   K7IMV2   A0A232EME2   A0A195AVM1   A0A0J7KJS7   E9IQV8   A0A0C9QWL8   A0A151XIU6   A0A195CR50   A0A026WG30   T1I1T4   A0A0N0BK39   A0A1D2MYL9   A0A087ZT03   A0A1Q3FPB3   B0W0L0   A0A1S4FMS0   Q16VF5   Q178G5   I4DIS0   A0A194PWG1   A0A2H1W7M0   A0A182V3S0   I4DM10   A0A1W7R8Z4   A0A1Y1KJ01   A0A084VJG1   J9K501   A0A1Y9GLC3   A0A2W1BJB4   Q7PFC5   A0A084VJF9   A0A2A4JQJ5   B0W0L2   A0A023EKL3   A0A2S2NBZ9   A0A1S4GAI5   A0A1Y9GLX8   A0A067R898   A0A2K8JM15   A0A1Q3FPL7   A0A2P8Z085   A0A1B6M0M6   A0A2H8TR84   Q7QHZ7   D1MAI4   Q16MN2   A0A1B6L5Z3   A0A1B6E3P5   A0A182J939   A0A224XR67   H9JEF2   T1DJ78   A0A1I8JUT6   A0A182W553   A0A2S1ZS47   A0A1I8JUR0   A0A1B6FE13   A0A182W552   A0A158NER9   A0A1B6E516   A0A182SH98  

PDB

6G9E     E-value=3.48492e-09,     Score=144

KEGG

101740062    no KO assigned | (RefSeq) chondroitin proteoglycan 2-like

GO

GO:0006030   GO:0005576   GO:0008061   GO:0016021   GO:0006397   GO:0005634   GO:0043565   GO:0050793   GO:0003676   GO:0016876   GO:0043039  

SignalP

Position:   1 - 17,         Likelihood:  0.999717

 

 

Length:

239

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02067

Exp number, first 60 AAs:

0.02067

Total prob of N-in:

0.01488

outside

1  -  239

 

 

Pi

280.805491

Theta

184.238059

Tajima's D

1.716813

CLR

0.208577

CSRT

0.831458427078646

Interpretation

Uncertain