SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08752  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA007901
Annotation
PREDICTED:_peritrophin-1-like_[Amyelois_transitella]
Location in the cell
Extracellular   Reliability : 4.113
 

Sequence

CDS
ATGAGTGCAAAGTTCCTTTATCTCGCCGCTTGCGTTGCTTTCGCTAACGCGGGAATACTTCTGGAGCACGCTCCACCATGCCCGGAAGAATACGGTGTCCAGGCATATGCGCATCCCGAGCAGTGCGACCAATTCTTTCTCTGCACTAACGGCACGCTCACCGTAGAGACCTGCGAGAACGGGCTTCTCTTCGACGGAAAGGGTGCAGTTCACAACCACTGCAACTATAATTGGGCTGTTGATTGTGGTCACAGAACAGCGAATTTGGAACCTCTATCAACACCCGGATGCGAATACCAATTCGGTATTTACCCAGATAGCCACGAGTGCTCCACTAGCTACATTAAATGCGCATATGGTGTCCCGGAACAATTTCCCTGCACCCCAGGCTTGGTCTACGATGAGCGCAGTCACAGCTGCAACTGGCCTGATCTCCTCCAACCCTTCTGTAACCCCGAGGCTGTCGTTGGCTTCAAATGCCCATCAAAAGTACCAGCGAACACTCCATCGGCTAAGTTCTGGCCGTTCCCCCGCTTCCCCGTACCTGGAGACTGTCACAGGCTCATCACCTGCGTGGAGGGTCAGCCCCGTCTTATCACCTGCGAAGAAGGAAAAGTGTTCGATGATCAGAACCTGACCTGTGAAGATCCAGAGATCGTTCCTCATTGCGGTCGCGCGTAA
Protein
MSAKFLYLAACVAFANAGILLEHAPPCPEEYGVQAYAHPEQCDQFFLCTNGTLTVETCENGLLFDGKGAVHNHCNYNWAVDCGHRTANLEPLSTPGCEYQFGIYPDSHECSTSYIKCAYGVPEQFPCTPGLVYDERSHSCNWPDLLQPFCNPEAVVGFKCPSKVPANTPSAKFWPFPRFPVPGDCHRLITCVEGQPRLITCEEGKVFDDQNLTCEDPEIVPHCGRA

Summary

EMBL
BABH01003010    BABH01003011    KZ150017    PZC74956.1    NWSH01000845    PCG73876.1    + More
AGBW02010205    OWR48929.1    ODYU01002626    SOQ40366.1    AK402643    BAM19265.1    AK401349    KQ459596    BAM17971.1    KPI95468.1    RSAL01000014    RVE53255.1    JTDY01005411    KOB67034.1    KQ461195    KPJ06660.1    APGK01031868    APGK01031869    APGK01031870    APGK01031871    APGK01031872    APGK01031873    KB740829    ENN78820.1    GU128094    KQ971379    ACY95477.1    EEZ97331.1    BT127769    AEE62731.1    MG601670    AYA49995.1    KM099162    AJZ68823.1    NEVH01020330    PNF21898.1    GL888103    EGI67439.1    ADTU01013618    KK852869    KDR14644.1    KQ982080    KYQ60236.1    KQ981490    KYN41287.1    KQ979999    KYN18317.1    KQ976736    KYM76109.1    JRES01001419    KNC23081.1    CH933814    EDW05545.1    PYGN01000257    PSN49919.1    MF942764    AWK28287.1    GEZM01091887    JAV56722.1    APCN01004769    AAAB01008811    EAL41678.2    JXJN01001545    JXJN01001546    JXJN01001547    CH902621    EDV44608.1    ATLV01013559    KE524867    KFB38106.1    CCAG010000242    AXCN02002174    JXUM01055299    KQ561861    KXJ77301.1    GBXI01016528    GBXI01000028    JAC97763.1    JAD14264.1    CH940655    EDW66044.1    UFQT01000526    SSX24991.1    GAPW01004052    JAC09546.1    CP012528    ALC49379.1    AF030895    AE014298    AY069467    AAB86431.1    AAF50926.1    AAL39612.1    AAN09563.1    DS231818    EDS41315.1    CH964239    EDW82299.1    GFDF01000918    JAV13166.1    KQ434867    KZC09151.1    KA646888    AFP61517.1    CM000366    EDX18443.1    CM000162    EDX02984.1    CH954180    EDV46789.1    NNAY01003378    OXU19515.1    CH379064    EAL31994.1    ADMH02001582    ETN61982.1    GFDF01000727    JAV13357.1    CH480823    EDW56258.1    ACPB03005153    GAHY01001174    JAA76336.1    GAKP01001265    JAC57687.1    CH916370    EDW00004.1    GFDL01005218    JAV29827.1    OUUW01000003    SPP78493.1    GAMC01007066    JAB99489.1    CH477594    EAT38547.1    GDHF01022810    JAI29504.1    KZ288312    PBC28401.1    GL761997    EFZ22502.1    CVRI01000020    CRK90710.1    CH479192    EDW26564.1    AXCM01000244    GECU01029081    JAS78625.1    AJVK01004583    GEMB01000889    JAS02251.1    QOIP01000001    RLU27139.1    KQ773121    OAD52431.1    KK107260    EZA53995.1    LJIJ01000399    ODM97883.1    GFTR01003854    JAW12572.1    KQ414821    KOC60451.1    DS235768    EEB16744.1    AK418029    BAN21244.1    GBHO01039161    JAG04443.1   
Pfam
PF01607   CBM_14
Interpro
IPR036508   Chitin-bd_dom_sf        + More
IPR002557   Chitin-bd_dom       
SUPFAM
SSF57625   SSF57625       
PDB
6G9E     E-value=0.00609392,     Score=90

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.989430
 
 
Length:
226
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.72681
Exp number, first 60 AAs:
1.72673
Total prob of N-in:
0.11063
outside
1  -  226
 
 

Population Genetic Test Statistics

Pi
311.030958
Theta
178.883253
Tajima's D
2.360021
CLR
0.217021
CSRT
0.930203489825509
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
28467696 GAVDGGINVPHSIKR 100.00 1e-07
29197581 CAYGVPEQFPCTPGIVYDER 100.00 1e-07
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