Gene

KWMTBOMO08743  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007904

Annotation

thioredoxin_[Bombyx_mori]

Location

Bomo_Chr15(-):4064965-4068257      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.004 Extracellular   Reliability : 1.385 Nuclear   Reliability : 1.326

CDS

ATGGGCTTAGCCACTGTAATTCAAAATGATGCTCATTTCCAGACTGAAATGGCTAACGCTGGAACCAAGTTAGTCGTTGTGGACTTTACAGCAACTTGGTGTCCACCGTGCCAAAGGATTGCCCCTTTTTTCGAGCAGCTACCAGCAAAGTTTCCGAGAGCAGTATTTCTCAAAGTAGACGTAGACAGATGCGCCGATACAGCGAGTGCTCAGGGCGTCAGTGCAATGCCCACATTCATTTTCTACAGAAACAGGACCAAAATCGACAGACTAGAAGGAGGCAATACTACTGTACTAGAAAACAAAGTTAGACAGTATTATGGCTCTGATGTTGCAGAAGAAGATGAAGACAATACTGTTGCTGGACATATGGATCTTATTACATTCATTACCAAGAGTGAGTGTGAATGTTTAAATGAGGCTGATGATCATCCACTTGCCCAAGCACTGACAAATGACAGGGGATACCTTGCTAGTTACTGTGATGAACAATTGATAATCAATATATCATTCAATCAGCTAGTAAAACTGCATTCAATAAAGATCAAAGGTCCAGCTGACAAAGGACCCAAATCTATAAAGTTATTCATCAATCAACCCAGAACTTTGGACTTTGATCAGGCTGCTGGTTACTCATCAGTGCAAGACTTAGAGCTAACTCCGAGCGACTTGGAAGGCAATCCTGTACCACTTAAATTCGTCAAATTCCAGAGTGTTCAAAACATTCAACTGTTTATAAAAGACAACCAGTCTGGTGATGAAGTGACAGAAATCAATCACCTTGCCTTCTATGGGTCACCAATCTCAACAACTAATATGGGTGAATTTAAAAGAGTAGCTGGCAAGAAAGGTGAAAGCCATTAA

Protein

MGLATVIQNDAHFQTEMANAGTKLVVVDFTATWCPPCQRIAPFFEQLPAKFPRAVFLKVDVDRCADTASAQGVSAMPTFIFYRNRTKIDRLEGGNTTVLENKVRQYYGSDVAEEDEDNTVAGHMDLITFITKSECECLNEADDHPLAQALTNDRGYLASYCDEQLIINISFNQLVKLHSIKIKGPADKGPKSIKLFINQPRTLDFDQAAGYSSVQDLELTPSDLEGNPVPLKFVKFQSVQNIQLFIKDNQSGDEVTEINHLAFYGSPISTTNMGEFKRVAGKKGESH

Uniprot

Q1HQB0   A0A2H1VHQ7   A0A2A4K8J3   A0A2W1BQE0   A0A437BSA2   A0A212F4J1   + More
A0A3G5N0M0   S4PDR1   A0A194PQ70   A0A0L7KPB9   A0A194QNV4   I6P6B6   V5GYT8   A0A2P0XJ01   A0A067QPC8   A0A2J7R025   D6WRJ3   A0A232EKA0   K7IQ98   N6TLC2   J3JZI4   V9IMP0   S4S5L3   A0A1Y1NK85   A0A164LNU2   A0A1W4WDZ0   A0A182NM97   A0A182RQ95   A0A1L8DTX5   A0A0L0CIM0   A0A182Y0U6   A0A0P5F9B8   A0A182QM23   A0A182TK88   A0A2H4FH34   Q103C3   A0A1L8DTV9   A0A182LZH3   A0A182PN96   A0A182WK81   A0A182XCS7   A0A182HM53   A0A0M8ZXF1   A0A182VLH7   A0A182LJQ0   A0A2M4BVU9   A0A087ZXX3   A0A2M3Z7K4   A0A2M4AFI2   W5JV71   A0A182FFD1   T1E7Z2   A0A182JFL2   A0A1L8E9T5   A0A182K711   A0A034WWA0   Q7PNL3   E9FTZ5   Q16Z72   A0A154P116   A0A023EMH5   A0A2A3EAC2   D1FPZ8   A0A0K8WLW7   A0A1I8PHA4   D3TPX6   A0A1A9VN15   A0A1A9XIM6   A0A1B0AQD5   A0A0L7QR84   W8C7Z7   A0A026X0G9   B4LBS2   A0A310SS58   A0A1I8MXT6   A0A1B0FAQ3   A0A0P4Y355   Q2LZA9   B4HAC7   B4MLT2   B0WPT0   B3M3M8   A0A3B0JVI4   V4BQ28   A0A1W4V9E7   E0VAD5   B4L991   B4PIW6   A0A336LK78   U5EV95   A0A1B0DMP9   T1HI44   A0A0J9UF49   B4HUI3   F4X5R5   B4J1J2   A0A151IX40   A0A0V0G4E6   A0A443SLM8   A0A069DS55  

Pubmed

19121390    28756777    22118469    30410444    23622113    26354079    + More
26227816    23569222    24845553    18362917    19820115    28648823    20075255    23537049    22516182    28004739    26108605    25244985    20966253    20920257    23761445    25348373    12364791    14747013    17210077    21292972    17510324    24945155    26483478    20353571    24495485    24508170    30249741    17994087    25315136    15632085    23254933    20566863    17550304    22936249    21719571    26334808   

EMBL

BABH01003018    DQ443142    ABF51231.1    ODYU01002626    SOQ40375.1    NWSH01000070    + More
PCG79982.1    KZ150017    PZC74950.1    RSAL01000014    RVE53250.1    AGBW02010351    OWR48655.1    MH443002    AYX41554.1    GAIX01003556    JAA89004.1    KQ459596    KPI95462.1    JTDY01008000    KOB64809.1    KQ461195    KPJ06655.1    JQ771345    AFD93376.1    GALX01002853    JAB65613.1    KY661338    AVA17425.1    KK853095    KDR11479.1    NEVH01008332    PNF34177.1    KQ971351    EFA06575.1    NNAY01003832    OXU18787.1    APGK01019954    KB740150    ENN81249.1    BT128666    KB632173    AEE63623.1    ERL89574.1    JR052766    AEY61779.1    JN699056    JN699057    AET74066.1    GEZM01002970    JAV97025.1    LRGB01003123    KZS04294.1    GFDF01004186    JAV09898.1    JRES01000341    KNC32091.1    GDIQ01258372    JAJ93352.1    AXCN02000938    KX358699    AOQ25848.1    DQ096568    DQ096570    AAZ79897.1    GFDF01004185    JAV09899.1    AXCM01001822    APCN01004354    KQ435834    KOX71553.1    GGFJ01008069    MBW57210.1    GGFM01003746    MBW24497.1    GGFK01006214    MBW39535.1    ADMH02000355    ETN66855.1    GAMD01002642    JAA98948.1    GFDG01003302    JAV15497.1    GAKP01000874    JAC58078.1    AAAB01008960    EAA11972.3    GL732524    EFX89451.1    CH477496    EAT39951.1    KQ434796    KZC05551.1    JXUM01058153    GAPW01003070    KQ561989    JAC10528.1    KXJ76979.1    KZ288308    PBC28713.1    EZ419898    ACZ28253.1    GDHF01000265    JAI52049.1    CCAG010020395    EZ423478    ADD19754.1    JXJN01001810    KQ414784    KOC61011.1    GAMC01003314    GAMC01003312    JAC03242.1    KK107046    QOIP01000004    EZA61795.1    RLU23311.1    CH940647    EDW68699.1    KQ759847    OAD62587.1    GDIP01242611    JAI80790.1    CH379069    EAL29599.1    CH479240    EDW37525.1    CH963847    EDW73008.1    DS232029    EDS32495.1    CH902618    EDV40321.1    OUUW01000009    SPP85073.1    KB202284    ESO90964.1    DS235005    EEB10341.1    CH933816    EDW17266.1    CM000159    EDW93536.1    UFQT01000040    SSX18604.1    GANO01001138    JAB58733.1    AJVK01007068    AJVK01007069    ACPB03014878    CM002912    KMY97785.1    CH480817    EDW50604.1    GL888742    EGI58155.1    CH916366    EDV95883.1    KQ980838    KYN12343.1    GECL01003196    JAP02928.1    NCKV01001403    RWS28402.1    GBGD01002407    JAC86482.1   

Proteomes

UP000005204    UP000218220    UP000283053    UP000007151    UP000053268    UP000037510    + More
UP000053240    UP000027135    UP000235965    UP000007266    UP000215335    UP000002358    UP000019118    UP000030742    UP000076858    UP000192223    UP000075884    UP000075900    UP000037069    UP000076408    UP000075886    UP000075902    UP000075883    UP000075885    UP000075920    UP000076407    UP000075840    UP000053105    UP000075903    UP000075882    UP000005203    UP000000673    UP000069272    UP000075880    UP000075881    UP000007062    UP000000305    UP000008820    UP000076502    UP000069940    UP000249989    UP000242457    UP000095300    UP000092444    UP000078200    UP000092443    UP000092460    UP000053825    UP000053097    UP000279307    UP000008792    UP000095301    UP000001819    UP000008744    UP000007798    UP000002320    UP000007801    UP000268350    UP000030746    UP000192221    UP000009046    UP000009192    UP000002282    UP000092462    UP000015103    UP000001292    UP000007755    UP000001070    UP000078492    UP000288716   

PRIDE

Q1HQB0   

Pfam

PF06201   PITH        + More
PF00085   Thioredoxin
PF07574   SMC_Nse1
PF11788   MRP-L46

Interpro

IPR036249   Thioredoxin-like_sf        + More
IPR010400   PITH_dom       
IPR008979   Galactose-bd-like_sf       
IPR037047   PITH_dom_sf       
IPR013766   Thioredoxin_domain       
IPR017937   Thioredoxin_CS       
IPR036388   WH-like_DNA-bd_sf       
IPR011513   Nse1       
IPR034732   EPHD       
IPR015797   NUDIX_hydrolase-like_dom_sf       
IPR021757   Ribosomal_L46_N       
IPR013083   Znf_RING/FYVE/PHD       

SUPFAM

SSF52833   SSF52833        + More
SSF49785   SSF49785       
SSF55811   SSF55811       

Gene 3D

2.60.120.470     1.10.10.10     3.30.40.10    

ProteinModelPortal

Q1HQB0   A0A2H1VHQ7   A0A2A4K8J3   A0A2W1BQE0   A0A437BSA2   A0A212F4J1   + More
A0A3G5N0M0   S4PDR1   A0A194PQ70   A0A0L7KPB9   A0A194QNV4   I6P6B6   V5GYT8   A0A2P0XJ01   A0A067QPC8   A0A2J7R025   D6WRJ3   A0A232EKA0   K7IQ98   N6TLC2   J3JZI4   V9IMP0   S4S5L3   A0A1Y1NK85   A0A164LNU2   A0A1W4WDZ0   A0A182NM97   A0A182RQ95   A0A1L8DTX5   A0A0L0CIM0   A0A182Y0U6   A0A0P5F9B8   A0A182QM23   A0A182TK88   A0A2H4FH34   Q103C3   A0A1L8DTV9   A0A182LZH3   A0A182PN96   A0A182WK81   A0A182XCS7   A0A182HM53   A0A0M8ZXF1   A0A182VLH7   A0A182LJQ0   A0A2M4BVU9   A0A087ZXX3   A0A2M3Z7K4   A0A2M4AFI2   W5JV71   A0A182FFD1   T1E7Z2   A0A182JFL2   A0A1L8E9T5   A0A182K711   A0A034WWA0   Q7PNL3   E9FTZ5   Q16Z72   A0A154P116   A0A023EMH5   A0A2A3EAC2   D1FPZ8   A0A0K8WLW7   A0A1I8PHA4   D3TPX6   A0A1A9VN15   A0A1A9XIM6   A0A1B0AQD5   A0A0L7QR84   W8C7Z7   A0A026X0G9   B4LBS2   A0A310SS58   A0A1I8MXT6   A0A1B0FAQ3   A0A0P4Y355   Q2LZA9   B4HAC7   B4MLT2   B0WPT0   B3M3M8   A0A3B0JVI4   V4BQ28   A0A1W4V9E7   E0VAD5   B4L991   B4PIW6   A0A336LK78   U5EV95   A0A1B0DMP9   T1HI44   A0A0J9UF49   B4HUI3   F4X5R5   B4J1J2   A0A151IX40   A0A0V0G4E6   A0A443SLM8   A0A069DS55  

PDB

1WWY     E-value=3.81072e-38,     Score=395

KEGG

732882    no KO assigned | (RefSeq) thioredoxin

GO

GO:0045454   GO:0005623   GO:0030915   GO:0006281   GO:0016787   GO:0046872   GO:0008270   GO:0000245   GO:0006397   GO:0005634   GO:0043565   GO:0050793   GO:0003676   GO:0016876   GO:0043039  

Length:

287

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0148

Exp number, first 60 AAs:

0.01134

Total prob of N-in:

0.03100

outside

1  -  287

 

 

Pi

201.485204

Theta

177.996996

Tajima's D

0.6559

CLR

0.793874

CSRT

0.56197190140493

Interpretation

Uncertain