Gene
KWMTBOMO08733
Pre Gene Modal
BGIBMGA004947
Annotation
reverse_transcriptase_[Lasius_niger]
Location in the cell
Nuclear Reliability : 4.192
Sequence
CDS
ATGGAATGTGTTATGTCGTGCCATCCGGCTGACCCCCGGCGCTCCCCGGTACCCGGGCCGGAGAGTGAGAAATTTGCTACCGAAGACCTCACTGAAGTAGGTGACCAGGCTTCAGTGTTCGTTAATGCTACTGGAAACAAGAAGAAACTAGTGCAGCAGGCCCTTCACCCAGGTTTATTTACCAGGGCCAAGAGTATGTCTATGAGCAACATACCAAACACCCAAACCAAAGAAAGCTCCTCTCAGCTGGATGCTGAAATGCAGCAATCAGATTTAGAAACAGTCACCCAGTGCTCCCAAATATCAAAACCACCAGACTGGCAAAGAGTTCCCATTCTACGCCATCCAAAAAAAAGAAAATTATCCTCCAAACCTTCTCCCGAATTAATAAAAACAACAAACAGCTTTAGCGGACTTCCGATAGATCAGCCGGAATATAGGGCGAGAGATGCAAAAGACAAGAAAACTAATAAACCTCCACCTATAATCTTGTACGGAATTGAGGATGTTCATAAGCTCACTGAACTCCTAGAAACCGCAACAGATAGATCTAATTTCTCTTTTAAGATTATTAGCAGAAACCAACTTAAAGTTTTATCAGTGGACCTGGAGATATACAAGAAGGTAATAACTGTTATACGAGAACATGGACTAATAGGACACACCTTTAACAGAAAAGACCAAAAATCCTACAGGATCGTTATAAGAAATCTCCACCACACTACTCCTACTACTGCTATCAAAGAGGCTATTGAAGAGAGTGGCAACACAGTAGTAGGTGAGATTATTAATGCCAAATTTGGTCCCGACAAAAAACCCACTTCTACCTTTTTTGTAAATTTGCTTCAGGGTCCTAATAATAGAGCTTCTAGGGATATTAGATTTATATATCATCAAGCTGTTACTATTGAAGAACCCAGAAAAAGATCCAGTGTAGTGCAATGTCAAAGATGTCAGCAATATGGTCATACCAAAAACTATTGTATGAAACCATATCGCTGTGTCAAGTGTGCTGGACCGCACAAAACTTCGGAATGCACAAAAGTGGATCGCAATACACCTGCTTTATGTGCATTGTGTTTAGGACCCCACCCAGCAAATTATAAAGGCTGTGAGGTATACAAGGAAATCCTATCAAGGAAAACCTCGCAACACTTACCACGTAAACATAAGCAATTTGAGTATAAACCTCAAAAAAATAAGGAAGAAACTGATTATAAAACATCTGCAAATCAGAATAAAGAGGAAATTCAACCGCTGCAGGAGCAGAGGAAAGCACATGAGCACAAATCGTATGCCGATACGGTCAGATCTCAGAGTCTAGACATTCTCCTAATTTCAGAGACACATATGACGACCAGCAGCTCGATAAGAATTAAAGGATATAAGATCTATTCCACAAATCACCCAGACGGTACAGCCCACGGCGGGACAGCAGTGATAATCAAAGCCACTGTTAGACACCATGTGCTACCAAACTACTGTACCGAACATATCCAGGCTACCACAGTAGCAGTCAGTGACAGAAATGGAGACTTTAATATATCATCAATTTATTGTCCCCCGAAACATAAAATAAGTGAAGCACAGTTTTCTGACTACTTTTTAAGCTTAGGATACAGATTTATTGCTGGGGGTGACTGGAATGCGAAGCATTCGCACTGGGGCTCTAGATTAATAACTACACGTGGAAGGGAGCTGAAGAAAAGTGTAGATAAACAGTTTTTGACTACTGTGTCAACTCCAGAACCAACACACTGGCCCACAGACCAGAACAGACTGCCAGACGTTCTAGACTTTTTCATCACAACAGGACTGTCTCGACTGTTCTTCAATGTTGAGTCATGCCTCGATAGCTCATCTAACCATATTCCTGTAATATTGACAGTGAGCACCACTATTCTTAAGAAAGAAGTTCGGCAAACATTGTACAACAAATACACAGACTGGGATAGCTTCCGGGAAATAGTTGATACGGAGCTAAGCCTAAAAATAGCACTTAAAACAGAAGAGGATATCGAAGAAGCCACAAAGCATTTCACCACAACAGTTCAAGCTGCCTGCTGGAAAACCTCTCCGGAGCACTTGAATCCCAGGCCACGGCAAAATAAGATATCGTTTGAAATAAAAGAACTGATTCTGAACAAAAGAAAACTGCGAAGAGTATGGCATACTAGCAGGCTCTCAGTAGATAAAAGAGCTCTTAACAAAGCAGTCAAGGATCTTAAACTTGCCATAAAAAATGTAAGGGACAAAACTATGGAATGTTATCTAGATTCCTTAACTGCAACAAGTGCTACTAACTACTCTCTATGGCGAGCTTGTAGGAACTATAATAGGCCTATGGATCCCAAACCGCCGTTACGGTTGCAGAATAACACTTGGGCAAGAACAAGACAAGAAAAAGCTGACGCCTTTGCTGTTCACTTAGCAAAAGTATTCACGCCTAATGATGCTGACCCAAACACTGATGATTCCTTCATAGATTCGGCCCTAAGTCAAGACTTCCAGCTCGATTTGCCGATTAGGCCTACAACTCCGAAAGAAGTCGTGGCAACAATCTCAAAATTGGAGGACAAAAAAGCCCCCGGGTTTGATTTAATAGACAAAAAAGTCTTGAAGGAACTTCCCAAAAAAGCCATAGTTTTTCTAACCATCTTATTTAATGGCATACTAAGAACTGGACACTTTCCATCACTGTGGAGAGTTTCACAAGTAATTATGATACCTAAAGTAGGGAAGCCAGTGAACGAACTTAGCTCATACAGGCCGATTAGTCTACTAACCGTAACGTCAAAACTTTTTGAGTCAGTCCTGCTGCACAGATTATTGGAGGAGATTCATCAAAGAGCCATAATCCCGGACCACCAGTTTGGCTTTCGCCAGCAGCATGGCACTGTGGAACAAGTCCATAGAATCTGCTCTGTGATAAGGAAGGCACTAGAGAGAAAGGAGTACTGCTCCTCTGCCTTCCTAGACGTGCAGCAAGCGTTTGATAGAGTATGGCACAAAGGTCTCTTGTATAAAGTAAAAACTCTTCTACCCTGTACATTCTTCCCCATCATAAAATCTTATCTAACAGAAAGAATATTTCAAATAAGAGAAGAAGAGTGTACATCGCCATTTCACTCAATCAAAGCTGGTGTACCGCAGGGGTCTGTCCTGGGTCCAGTCTTGTATACCATTTACACATGTGATTTACCACAAAGCGAACATGTTACATTAGCAACATTCGCAGACGATACCGCTGTACTGGCATGTAGCAATTGCCCAAACGAAGCTTCAGACTTCCTACAGACTGGATTGCAAGAAATTGAAACCTGGCTTTCAAAGTGGAGAATAAAAACTAGTGTGACAAAATCCGTTCATGTAACCTTCACCCTCCGTAGAGGAGACTGTCCGCCAGTAACTCTGTGCAATCAACAACTCCCGCAAGAACACTGCGTAAAATACTTGGGAATACACCTTGATAGGAGACTCGTATGGAAACAACACATACAGAAGAAGAGAGAAGAAATCAACCTGAAATACAGAGGACTCTACTGGCTGCTTGGCAGAAATTCCAAGCTGTCAGTAGATAATAAGCTACTCATCTACGAAATGCTCTTGAAACCAATTTGGACATACGGGATTCAACTATGGGGTTCGGCGTGTGACTCTAACATAAATATCATACAGAGGGTTCAAAATTACATCCTGAAACAAATATCGAACTGTCCGTGGTTTATAAAAACATCGGAGATTCATGAACACCTCAAAATCAGGACTGTTAAACAGGAAATCAAGACCTGGAGTATGAAATACAGAAAAAGGCTAGAAATGCATCCTAATAAGCTTGCCACGCAACTAACCACACCGGACCTAATAAATAGGCTTAAAAGGCGACAAATCCTAAGTCTTGATAGACACAGTTGA
Protein
MECVMSCHPADPRRSPVPGPESEKFATEDLTEVGDQASVFVNATGNKKKLVQQALHPGLFTRAKSMSMSNIPNTQTKESSSQLDAEMQQSDLETVTQCSQISKPPDWQRVPILRHPKKRKLSSKPSPELIKTTNSFSGLPIDQPEYRARDAKDKKTNKPPPIILYGIEDVHKLTELLETATDRSNFSFKIISRNQLKVLSVDLEIYKKVITVIREHGLIGHTFNRKDQKSYRIVIRNLHHTTPTTAIKEAIEESGNTVVGEIINAKFGPDKKPTSTFFVNLLQGPNNRASRDIRFIYHQAVTIEEPRKRSSVVQCQRCQQYGHTKNYCMKPYRCVKCAGPHKTSECTKVDRNTPALCALCLGPHPANYKGCEVYKEILSRKTSQHLPRKHKQFEYKPQKNKEETDYKTSANQNKEEIQPLQEQRKAHEHKSYADTVRSQSLDILLISETHMTTSSSIRIKGYKIYSTNHPDGTAHGGTAVIIKATVRHHVLPNYCTEHIQATTVAVSDRNGDFNISSIYCPPKHKISEAQFSDYFLSLGYRFIAGGDWNAKHSHWGSRLITTRGRELKKSVDKQFLTTVSTPEPTHWPTDQNRLPDVLDFFITTGLSRLFFNVESCLDSSSNHIPVILTVSTTILKKEVRQTLYNKYTDWDSFREIVDTELSLKIALKTEEDIEEATKHFTTTVQAACWKTSPEHLNPRPRQNKISFEIKELILNKRKLRRVWHTSRLSVDKRALNKAVKDLKLAIKNVRDKTMECYLDSLTATSATNYSLWRACRNYNRPMDPKPPLRLQNNTWARTRQEKADAFAVHLAKVFTPNDADPNTDDSFIDSALSQDFQLDLPIRPTTPKEVVATISKLEDKKAPGFDLIDKKVLKELPKKAIVFLTILFNGILRTGHFPSLWRVSQVIMIPKVGKPVNELSSYRPISLLTVTSKLFESVLLHRLLEEIHQRAIIPDHQFGFRQQHGTVEQVHRICSVIRKALERKEYCSSAFLDVQQAFDRVWHKGLLYKVKTLLPCTFFPIIKSYLTERIFQIREEECTSPFHSIKAGVPQGSVLGPVLYTIYTCDLPQSEHVTLATFADDTAVLACSNCPNEASDFLQTGLQEIETWLSKWRIKTSVTKSVHVTFTLRRGDCPPVTLCNQQLPQEHCVKYLGIHLDRRLVWKQHIQKKREEINLKYRGLYWLLGRNSKLSVDNKLLIYEMLLKPIWTYGIQLWGSACDSNINIIQRVQNYILKQISNCPWFIKTSEIHEHLKIRTVKQEIKTWSMKYRKRLEMHPNKLATQLTTPDLINRLKRRQILSLDRHS
Summary
EMBL
Proteomes
Interpro
Gene 3D
PDB
1WDU
E-value=0.0149291,
Score=95
Ontologies
GO
Topology
Length:
1304
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.06714
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1 - 1304
Population Genetic Test Statistics
Pi
322.679371
Theta
210.283227
Tajima's D
1.895141
CLR
46.105562
CSRT
0.863706814659267
Interpretation
Uncertain
