Gene

KWMTBOMO08721

Annotation

reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr15(-):3513916-3515344      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.269

CDS

ATGGAGACTCGACATAATAAATTACGTATAGGACCGCTGCCCGAGGGCGATCGTCGGGGCACGTCTGTAGCTGGCCACGGGCGTGACAGCATGCTAACCAGTGGCTCCCGGACCACCGGCTGTACGGGAGTCGGGGACGCGGGGGGGAGGGGAAAGTCCTCAAGAGCTACAGCCGAGGCGATAAGTGGGAGTAAATCAGCAACGCCAGCTGAGGATGTTTCGCAGGAGACATACGTCACCCAACCTGCGACCACCAAAGCTGGTAAACCAAGAGTGCGCATGAAATGGAGTGAAGATATTAACCTATTTATCATGCGCACATATTTCTACATTACCAAACTAGAAACGGACAAGACACAACGGAAAAGACTTCATGAACGATTCCGACATCGGTACCCTAGTTTAGACGTATCGTCACAAAGAATAGCAGACCAAAGAAGAGTTATACTAAGAAATAGACTTCTATCAGAACAAACTATTGACAACATTAAAAAATCAGTCGCAGAGCAACTTAAACAAGAAGAACAGGACCATTTCAATACATCTAGACATAATGTATCCACCACACAACAACCAACTATGCCAGTCATCTTTGAAAAAGATCCCGCAAACTCCGACTATTATTCAACATCAATCGATATGGTCACAAATCAACAACTTTCAACTACAATAAGACATCAATCATGTGAAGTTTCGACACAAACAAATACGCTCCCAGAGTGGACTACACTTTTACAATCTGCAGAACAAGATAAATCTCTCGAAACAGCTATCACTAACGAACTAGCACAAAAACTTAACACGCAGCTTGAAACAACACTAATTCAATATTCAGGTACAGACCCTACATCTCGTCCCAAACTACCTCGATTAAAAGAGAATAAAACTTTATACGACTTAGTTGCAGTTTTTAACAAAGAAATTCTCGGTAAACACTTCACGATTGAATCTGACATCTGTGACATACAGTCACTGGTCTACTGCAGTGCTTTGGTTATTTCTGAGCATTTAGGATATAAAATCAGAAATAATCTACTATCACCCGAAAACCGTACACGTAAATCGCGAAAACCCTGTTGGCAATTTAGAATCGAAAATGATATTAAGAGACTGCGAGCTGAAATAGGTAGATTAACACAATACATTAACAACCATAATAACAGGTCTGATCGATTAATTAAAGCAGTTGAACAAATTTTTAGGAACACAAGAATTCATTCATCATATGAGAATAATAATACCAGGCCAGAAGAATTTTTGGACACATTAAAACAGAAATTAGCACTTAAATCACAGAGACTAAGGTAG

Protein

METRHNKLRIGPLPEGDRRGTSVAGHGRDSMLTSGSRTTGCTGVGDAGGRGKSSRATAEAISGSKSATPAEDVSQETYVTQPATTKAGKPRVRMKWSEDINLFIMRTYFYITKLETDKTQRKRLHERFRHRYPSLDVSSQRIADQRRVILRNRLLSEQTIDNIKKSVAEQLKQEEQDHFNTSRHNVSTTQQPTMPVIFEKDPANSDYYSTSIDMVTNQQLSTTIRHQSCEVSTQTNTLPEWTTLLQSAEQDKSLETAITNELAQKLNTQLETTLIQYSGTDPTSRPKLPRLKENKTLYDLVAVFNKEILGKHFTIESDICDIQSLVYCSALVISEHLGYKIRNNLLSPENRTRKSRKPCWQFRIENDIKRLRAEIGRLTQYINNHNNRSDRLIKAVEQIFRNTRIHSSYENNNTRPEEFLDTLKQKLALKSQRLR

Uniprot

Q07431   W8B4W2   W8BF34   A0A2W1BHQ8   A0A1Y1MZJ0   A0A2H1W833   + More
W8AXW6   A0A1Y1MWD8   A0A1S3DNS5   H3AQQ4   Q76IN5   A0A1S3D6Z6   A0A3S2LN57   A0A336M9S3   A0A2W1B274   A0A1S3DMV8   A0A139W9A5   A0A1S3DSG3   A0A3Q0IW99   R4GAY5   E0VSD9   E0VPJ4   E0W0M4   E0VPK6   E0W0H3   E0VCN4  

Pubmed

8385316    24495485    28756777    28004739    9215903    12949131    + More
18362917    19820115    21881562    20566863   

EMBL

L08889    AAA92147.1    GAMC01018219    JAB88336.1    GAMC01018221    JAB88334.1    + More
KZ150118    PZC73245.1    GEZM01018924    JAV89960.1    ODYU01006945    SOQ49255.1    GAMC01016897    JAB89658.1    GEZM01018922    JAV89961.1    AFYH01106869    AB097127    BAC82595.1    RSAL01001347    RVE40825.1    UFQT01000728    SSX26770.1    KZ150426    PZC70922.1    KQ972532    KXZ75876.1    AAWZ02033877    DS235750    EEB16295.1    DS235366    EEB15300.1    DS235861    EEB19180.1    EEB15312.1    DS235859    EEB19129.1    DS235060    EEB11140.1   

Proteomes

UP000079169    UP000008672    UP000283053    UP000007266    UP000001646    UP000009046    + More

PRIDE

Q07431   

Pfam

PF00078   RVT_1

Interpro

IPR000477   RT_dom        + More
IPR001611   Leu-rich_rpt       

ProteinModelPortal

Q07431   W8B4W2   W8BF34   A0A2W1BHQ8   A0A1Y1MZJ0   A0A2H1W833   + More
W8AXW6   A0A1Y1MWD8   A0A1S3DNS5   H3AQQ4   Q76IN5   A0A1S3D6Z6   A0A3S2LN57   A0A336M9S3   A0A2W1B274   A0A1S3DMV8   A0A139W9A5   A0A1S3DSG3   A0A3Q0IW99   R4GAY5   E0VSD9   E0VPJ4   E0W0M4   E0VPK6   E0W0H3   E0VCN4  

KEGG

105843014    no KO assigned | (RefSeq) uncharacterized LOC105843014

GO

GO:0003964  

Length:

435

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00383

Exp number, first 60 AAs:

0

Total prob of N-in:

0.03214

outside

1  -  435

 

 

Pi

29.687565

Theta

14.095705

Tajima's D

3.313944

CLR

0

CSRT

0.990550472476376

Interpretation

Uncertain