Gene
KWMTBOMO08710
Annotation
Retrotransposable_element_Tf2_155_kDa_protein_type_1_[Papilio_machaon]
Location in the cell
Nuclear Reliability : 4.248
Sequence
CDS
ATGAAATCAATGGCGGATGGAAAAACAAACGTCATATGCATAACTTCCATTGCTACACCAAGTGGACAAGTTTTTGGAATTCCAGTCGAATATCAACCCGTAAATCTTCATAAGGTGATCACAACTACTCCTAACTACACCAGAGTAAAAAACTCTTTAGTAAAAAGGCATCAAACGAGGAAAATATGGATAACTGTGACGGAGGAAATTTCAAAAACATATTTGGATGAAGAACAAAATTTGCAATTCAATGATTGTTATTTGGAAGAGATTTCAGAACAACCTGTTAGTTATGAATCGACATCTAGTGATTCTAATCACATGCTTGAAAAACTGTTAGAAAAACTACAAGAACAAAAACAGCAGAAACCAGAAAAACAAAATTTAGGGAAAATTGCAAAGGATTTTATTATAGAAAAATTCAACGGCCGTAATTCAAATGCATTACAGTGGATCAAAGATTTTAATAAAGAATGTGAACGTTTTCAAATAAACGAGGATAAACAAAAAATTGAAATTTTGAAGAACTTCTTAGAAAATGCTAGTGTAGATTGGTACAGTTGTATGCTGATGAAGCTTACAGTACAATCAGAATGGAGCAAATGGGAGAAAAATTTTTGTGAGACATTTGCGAACAAAGGATGGTCCTCCACTAGATATGCTCTTGCCTTTAAATATCAATCGGGATCCTTACTTGAGTATGCTTTAAAGAAGGAGAAATTATTGTTGGAAGTCAGGAAGACAGTGGATACCGGAACAATTATTGATCTCATAGCATTTGGTTTACCCAATTATGTGGCGGACAAGATTGACAAAGAAACATTACAAAGAACGGAAGACCTTTACAATGAGATAAGAAAATTGGAACATCTGGTGATGAAAAATAAATATGAAAAAAGGAACAGCTCATATAATTTAGATAATAAAGGGAAAAAGATTGACGAAAAGAAACCATGCCCAATCTGTTTAAATGAGAAAAATGGGAAACGGTTCCACCCAGAGGACAGCTGTTGGTTCAAAGAAAAAAATAAAAAAGCTGTGGTTTCTGGAATCTATGACTCTGGATCTAATGTTTCTTTAATTAATGCAAGATTATTGAAAATACAAGAGAAACAGAAGACAAATGATATGCAAGTTGTAAACTTAAAAACTATTAATGGTGAGAAAAAAACGAAAGGTATGGTAACGCTAAAAATAAAAATCTACAATATTGAAAGAAATATGGATATTTTTGTGGTGGATAATGAAAATTTTAACTATGACTTCTTAATTGGTTTGGATTGTATAAAAAAATTCAAATTAATACAAAATGAAGAACTTAACATCATACAATATCCCAAAAAGAAAAGCATAATCTCAAATGAACATTGTTCTAATGAGAATAATGTAACAAATGTCGGAATTCCTAATGTACTAGGTGACAAAAATAAAGAACAAACATTTAAAGAGAGAATAGAAGAGAAAGAGAAGATAGAGATGGAACTATACTCTGAGATAGTAAAAAAGGGTACTACTATAAATACCAACAAATTGTGTGAAATTAATTTCAATGAACATGTAAACATTGATGAATTTCAAATGTCTGTAAATCATCTAGATTTATATCAGCAATCAAAAATTGAGAAGTTAGTAGATAAATACAAATCTGTTTTTGCTAAGGACAAATATGATGTTGGCTCTGTGCAGGATTACGAAGCCCATATAGACTTGATGGTAGATAAATACTGCTATAAGCGTCCGTACAGATGCACAATTGAAGACAGAACAGAAATTGAAAGTCAAATATCGAAGCTACTACAGAAAAATTTGATAGAGGAATCTTACAGCCCGTTTGCTGCTCCTGTAACTCTAGCATATAAGAAAGAAGATGATAAAAAAACAAGATTATGCATAGATTTCAGAGATTTAAACAAAATAGTAGTTCCACAATCACAACCTTTCCCACTTATAGAGGACTTAATGACCAAAACAGTAAACTGTAAGTATTATTCTACATTAGACATAAACTCAGCATTTTGGTCGATCCCATTGAAAATTCAAGATAGACATAAGACTGCTTTTGTGACACAAGAAGGACATTTTCAATGGACTTGTCTCCCATTTGGGTTAAAGACTGCACCAGCGATTTTCCAAAGAATATTGAGCAATATTATAAGAAAACACAGACTATCTAACTTTGCAGTAAACTTTATTGACGACATCTTAATTTTTTCTAAAACTTTTGAGGAACATATACAACACATATCGAGACTACTGGAAGCAATACAAAAGGAAGGGTTTAGACTGAAGTTTTCAAAATGTACATTTGCAAGTCACCATGCTAAATACTTGGGTCATATAATAGAAGACAATTCAGTTAGACCTCTGAAAGATTATTTAACTGCTGTCAAAAGCTTCCCAATTCCAGAAACAAGGAAAAATATACGGCAGTTTTTGGGAAAAGTAAATTTTCATCATAAGTTTGTACCACATAGTGCAATTATCCTCGATCCATTACATAACTTATTAAGGAAAGATGTGAAATTTGTATGGACGGCAGAATGCCAGGAAGCATTTGATAAAATTAGAGCATTGCTTTGCTCAGAACCAATCCTAAAAATATTTGACCCAGATTCACCGATAAGAATTTACACAGATGCTAGTATCAAAGGAGTTGGAGCAGTGTTGAAACAAGACGATGAAAACGGCGTGAGTAAACCGGTTGCTTATTTTTCGAAGAAATTAACAGAAGCACAGAAAAAGAAGAAGGCAATATACTTAGAATGTCTGGCGATAAAAGAAGCAGTCAAATACTGGCAACATTGGCTTATGGGAAAAGAATTTATGGTATACACAGATCATAAACCCCTGGAAAATATGAACATTAAAGCTCGAACTGATGAGGAACTAGGTGATTTAACATATTATCTATCACAATATAATTTTGAAATTAAATACAACCCAGGAAAATCAAATCAAGAAGCGGACTGCTTAAGCCGAAATCCAGTCTTAGAAGCAAATGATAATAACGACGATTTTTTAAAGGTCGTAAATTTAATCGACCTACAAGAAATAAAGAATGACCAGCTAACAAATCCAGACCTACAAAAAGAAAAGAATAAACACATATTAGAGAATGAAGTTTATTACAAGAAAAATAAAAGAAGAAATAAGATTATACTGTCAGAAAAACTTAGCAAAGCTCTAATAAAAAAAGTCCATGACACATACTGCCACATTGGAAGAACCCAGATGACAAATAAAATAACACCATTCTTTTCAGCCAAAAATATTACAGCAAACATTAATAAAATGTGTGATGCGTGTGAAACCTGCATTAAAAACAAGTCCAGGAGGAAGTCGAAATATGGTTTAATGTCACATTTGGGACCAGCCACACACCCGTTTGAAATTGTATCCATCGATACTATTGGGGGCTTTGGAGGATCCCGATCAACCAAAAGTACAGAGAAGGGTATAAATTGGAAGAAGGAGATAGTGTTTATGTGGAGAATGGAAATAAACTAA
Protein
MKSMADGKTNVICITSIATPSGQVFGIPVEYQPVNLHKVITTTPNYTRVKNSLVKRHQTRKIWITVTEEISKTYLDEEQNLQFNDCYLEEISEQPVSYESTSSDSNHMLEKLLEKLQEQKQQKPEKQNLGKIAKDFIIEKFNGRNSNALQWIKDFNKECERFQINEDKQKIEILKNFLENASVDWYSCMLMKLTVQSEWSKWEKNFCETFANKGWSSTRYALAFKYQSGSLLEYALKKEKLLLEVRKTVDTGTIIDLIAFGLPNYVADKIDKETLQRTEDLYNEIRKLEHLVMKNKYEKRNSSYNLDNKGKKIDEKKPCPICLNEKNGKRFHPEDSCWFKEKNKKAVVSGIYDSGSNVSLINARLLKIQEKQKTNDMQVVNLKTINGEKKTKGMVTLKIKIYNIERNMDIFVVDNENFNYDFLIGLDCIKKFKLIQNEELNIIQYPKKKSIISNEHCSNENNVTNVGIPNVLGDKNKEQTFKERIEEKEKIEMELYSEIVKKGTTINTNKLCEINFNEHVNIDEFQMSVNHLDLYQQSKIEKLVDKYKSVFAKDKYDVGSVQDYEAHIDLMVDKYCYKRPYRCTIEDRTEIESQISKLLQKNLIEESYSPFAAPVTLAYKKEDDKKTRLCIDFRDLNKIVVPQSQPFPLIEDLMTKTVNCKYYSTLDINSAFWSIPLKIQDRHKTAFVTQEGHFQWTCLPFGLKTAPAIFQRILSNIIRKHRLSNFAVNFIDDILIFSKTFEEHIQHISRLLEAIQKEGFRLKFSKCTFASHHAKYLGHIIEDNSVRPLKDYLTAVKSFPIPETRKNIRQFLGKVNFHHKFVPHSAIILDPLHNLLRKDVKFVWTAECQEAFDKIRALLCSEPILKIFDPDSPIRIYTDASIKGVGAVLKQDDENGVSKPVAYFSKKLTEAQKKKKAIYLECLAIKEAVKYWQHWLMGKEFMVYTDHKPLENMNIKARTDEELGDLTYYLSQYNFEIKYNPGKSNQEADCLSRNPVLEANDNNDDFLKVVNLIDLQEIKNDQLTNPDLQKEKNKHILENEVYYKKNKRRNKIILSEKLSKALIKKVHDTYCHIGRTQMTNKITPFFSAKNITANINKMCDACETCIKNKSRRKSKYGLMSHLGPATHPFEIVSIDTIGGFGGSRSTKSTEKGINWKKEIVFMWRMEIN
Summary
Uniprot
EMBL
Proteomes
Interpro
Gene 3D
ProteinModelPortal
PDB
4OL8
E-value=1.8864e-70,
Score=680
Ontologies
GO
Topology
Length:
1168
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.403250000000001
Exp number, first 60 AAs:
0.39311
Total prob of N-in:
0.01865
outside
1 - 1168
Population Genetic Test Statistics
Pi
195.207
Theta
163.874552
Tajima's D
0.506497
CLR
0.032822
CSRT
0.51812409379531
Interpretation
Uncertain
