Gene

KWMTBOMO08709  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007920

Annotation

PREDICTED:_chondroitin_proteoglycan-2-like_[Amyelois_transitella]

Location

Bomo_Chr15(-):3197831-3209343      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 4.278

CDS

ATGTGGTTCAGCCCTACCCTTCAGCGTGTCTATAGAGAACATTCCCCTCTTTGTTTGCTGGAGCATAAATCCTTAAGCGTGATCCTGGCAGCCATAAACCTAACATCATGTGCCCAAATCGAGGACCCGTGCAAGACCAAAGCTAGAATAGTGGCCGATGACAAATACTGCGACAAGTATTGGGAATGTGACAACGGACAATCGGTACAATACGACTGCCCCAATGGACTTGTTTTTGCGGGCAAACATCGAGGGGTGACTGAGGGCTGCGATTACCCTTGGAGGTCAAATTACTGCGAGTACCCGAAGGCTCAGATAAATCCCCCAATCGGCACGGAGCACTGCGACTGGCTGTACGGTATCTTTGGCCACGAGACCTCCTGCACCAGGTACTGGACCTGCTGGAACGGCACCGCCACGGAGCAGCTTTGCATCGGAGGGCTTTTGTACAATGAGAACGCCCACTCTTGTGACTGGCCTGAGAACGTTGACGGTTGTCAAAAGCATCCTCTCTGCAACGAGGACCCGAACGGTAACGTGCCCTTAGGCAAGTCCTGCAACCGGTACTGGCAGTGCCAGGGCGGATATCCTCGGCTGCAGCGTTGCCCTGCTATGTTGGTGTTTGACAGGCGCTCGCTGAGATGCGTGGTACCACCCACCGAGGACTGCGACATCCCCACCACCACCGCTCCACCACCAGAAGAAGAGCAGCAGGATGCGCGACAGGGACAACACCAGAAGCGGCCCTCCAACGATTTCCAAGAGCAGCAACAGGGCCGCACAAGACCGAGGAACTAA

Protein

MWFSPTLQRVYREHSPLCLLEHKSLSVILAAINLTSCAQIEDPCKTKARIVADDKYCDKYWECDNGQSVQYDCPNGLVFAGKHRGVTEGCDYPWRSNYCEYPKAQINPPIGTEHCDWLYGIFGHETSCTRYWTCWNGTATEQLCIGGLLYNENAHSCDWPENVDGCQKHPLCNEDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLRCVVPPTEDCDIPTTTAPPPEEEQQDARQGQHQKRPSNDFQEQQQGRTRPRN

Uniprot

A0A2A4JUL9   A0A2W1BJP1   A0A194PQ45   I4DJ00   I4DM84   A0A2H1WCP6   + More
H9JEH3   J3JV56   A0A411G6L7   A0A182XHH9   A0A0C9RJ66   A1YR30   A0A0L0CML4   A0A1B6CQM1   T1PAP8   A0A1I8MUE2   A0A3L8E5I7   K7IMV0   A0A2S1ZS44   A0A1B0A3C3   W8AWR9   A0A0K8V7P5   A0A195FLS9   A0A026WEA2   A0A1A9VBU7   A0A158NER6   A0A034W9H0   E2A162   A0A1Y1KUZ8   A0A0A1WZW3   A0A2J7QFM3   A0A1B0FRA3   A0A0M9A9K6   E0VTP1   A0A1D1Y2N2   A0A0L7QP97   A0A3S7SJV9   A0A067R5M3   A0A154PBC4   A0A1B0DG13   A0A1Y1KS78   E2B780   A0A087ZR63   A0A310SFW2   A0A1Y1KVS0   A0A023F9L5   A0A1A9WLR4   A0A1B6MNB4   Q5TU29   A0A182HTW7   A0A2S2PCP1   A0A069DRR5   R4FP21   A0A0J7KRJ3   A0A195DZQ9   A0A151XIS6   A0A224XUL7   W5JF71   E9IAA4   J9JMX9   A0A195AVQ7   A0A195CRB6   A0A2S2QB74   A0A023H838   A0A0P4W2Y4   A0A164WRK2   A0A0P5RHW0   A0A0P5WKF6   A0A0P5DDP2   A0A0N8DEB1   A0A0P5HB82   A0A0N8C9B9   A0A0P5GNU4   A0A0P5JSN8   A0A0N8D9Y4   A0A0P5DXW3   A0A0P5IKJ7   A0A0P5UCX7  

Pubmed

28756777    26354079    22651552    19121390    22516182    23537049    + More
18362917    19820115    26108605    25315136    30249741    20075255    29712872    24495485    24508170    21347285    25348373    20798317    28004739    25830018    20566863    24845553    25474469    12364791    14747013    17210077    26334808    20920257    23761445    21282665   

EMBL

NWSH01000550    PCG75701.1    KZ150142    PZC72940.1    KQ459596    KPI95437.1    + More
AK401268    BAM17890.1    AK402402    BAM19024.1    ODYU01007783    SOQ50840.1    BABH01003098    APGK01017227    BT127122    KB739998    KB631984    AEE62084.1    ENN81971.1    ERL87661.1    MH365717    QBB01526.1    GBYB01002879    GBYB01013267    JAG72646.1    JAG83034.1    EF125547    KQ971316    ABL73931.1    EEZ98786.1    JRES01000292    KNC32684.1    GEDC01021558    JAS15740.1    KA644988    AFP59617.1    QOIP01000001    RLU27138.1    MF942765    AWK28288.1    GAMC01016018    GAMC01016017    JAB90537.1    GDHF01027495    GDHF01017362    JAI24819.1    JAI34952.1    KQ981490    KYN41286.1    KK107260    EZA53996.1    ADTU01013616    ADTU01013617    ADTU01013618    GAKP01007985    JAC50967.1    GL435707    EFN72829.1    GEZM01075112    JAV64271.1    GBXI01010869    GBXI01010222    GBXI01001404    GBXI01001248    JAD03423.1    JAD04070.1    JAD12888.1    JAD13044.1    NEVH01015297    PNF27343.1    CCAG010016939    CCAG010016940    KQ435709    KOX80017.1    DS235768    EEB16747.1    GDJX01019055    JAT48881.1    KQ414821    KOC60452.1    MG601722    AYA50047.1    KK852869    KDR14642.1    KQ434867    KZC09152.1    AJVK01033546    GEZM01075115    JAV64269.1    GL446149    EFN88441.1    KQ773121    OAD52430.1    GEZM01075113    JAV64270.1    GBBI01001099    JAC17613.1    GEBQ01002547    JAT37430.1    AAAB01008859    EAL40816.2    APCN01000586    GGMR01014591    MBY27210.1    GBGD01002259    JAC86630.1    GAHY01000338    JAA77172.1    LBMM01003945    KMQ92963.1    KQ979999    KYN18316.1    KQ982080    KYQ60237.1    GFTR01004757    JAW11669.1    ADMH02001371    ETN62736.1    GL761997    EFZ22492.1    ABLF02036175    KQ976736    KYM76110.1    KQ977381    KYN03180.1    GGMS01005577    MBY74780.1    KC200273    AGG20312.1    GDRN01076702    JAI62868.1    LRGB01001126    KZS13507.1    GDIQ01100557    JAL51169.1    GDIP01097865    JAM05850.1    GDIP01161467    JAJ61935.1    GDIP01042159    JAM61556.1    GDIQ01235498    JAK16227.1    GDIQ01102107    JAL49619.1    GDIQ01237760    JAK13965.1    GDIQ01220066    JAK31659.1    GDIP01054375    JAM49340.1    GDIP01150909    JAJ72493.1    GDIQ01220065    JAK31660.1    GDIP01114864    JAL88850.1   

Proteomes

UP000218220    UP000053268    UP000005204    UP000019118    UP000030742    UP000076407    + More
UP000007266    UP000037069    UP000095301    UP000279307    UP000002358    UP000092445    UP000078541    UP000053097    UP000078200    UP000005205    UP000000311    UP000235965    UP000092444    UP000053105    UP000009046    UP000053825    UP000027135    UP000076502    UP000092462    UP000008237    UP000005203    UP000091820    UP000007062    UP000075840    UP000036403    UP000078492    UP000075809    UP000000673    UP000007819    UP000078540    UP000078542    UP000076858   

PRIDE

H9JEH3   

Pfam

PF01607   CBM_14        + More
PF10509   GalKase_gal_bdg

Interpro

IPR002557   Chitin-bd_dom        + More
IPR036508   Chitin-bd_dom_sf       
IPR000705   Galactokinase       
IPR020568   Ribosomal_S5_D2-typ_fold       
IPR019539   GalKase_gal-bd       
IPR036554   GHMP_kinase_C_sf       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       
IPR019741   Galactokinase_CS       
IPR006203   GHMP_knse_ATP-bd_CS       

SUPFAM

SSF57625   SSF57625        + More
SSF54211   SSF54211       
SSF55060   SSF55060       

Gene 3D

3.30.230.10     3.30.70.890    

ProteinModelPortal

A0A2A4JUL9   A0A2W1BJP1   A0A194PQ45   I4DJ00   I4DM84   A0A2H1WCP6   + More
H9JEH3   J3JV56   A0A411G6L7   A0A182XHH9   A0A0C9RJ66   A1YR30   A0A0L0CML4   A0A1B6CQM1   T1PAP8   A0A1I8MUE2   A0A3L8E5I7   K7IMV0   A0A2S1ZS44   A0A1B0A3C3   W8AWR9   A0A0K8V7P5   A0A195FLS9   A0A026WEA2   A0A1A9VBU7   A0A158NER6   A0A034W9H0   E2A162   A0A1Y1KUZ8   A0A0A1WZW3   A0A2J7QFM3   A0A1B0FRA3   A0A0M9A9K6   E0VTP1   A0A1D1Y2N2   A0A0L7QP97   A0A3S7SJV9   A0A067R5M3   A0A154PBC4   A0A1B0DG13   A0A1Y1KS78   E2B780   A0A087ZR63   A0A310SFW2   A0A1Y1KVS0   A0A023F9L5   A0A1A9WLR4   A0A1B6MNB4   Q5TU29   A0A182HTW7   A0A2S2PCP1   A0A069DRR5   R4FP21   A0A0J7KRJ3   A0A195DZQ9   A0A151XIS6   A0A224XUL7   W5JF71   E9IAA4   J9JMX9   A0A195AVQ7   A0A195CRB6   A0A2S2QB74   A0A023H838   A0A0P4W2Y4   A0A164WRK2   A0A0P5RHW0   A0A0P5WKF6   A0A0P5DDP2   A0A0N8DEB1   A0A0P5HB82   A0A0N8C9B9   A0A0P5GNU4   A0A0P5JSN8   A0A0N8D9Y4   A0A0P5DXW3   A0A0P5IKJ7   A0A0P5UCX7  

PDB

5WVG     E-value=4.85686e-06,     Score=118

KEGG

101742643    no KO assigned | (RefSeq) chondroitin proteoglycan-2-like

GO

GO:0008061   GO:0005576   GO:0006030   GO:0005524   GO:0004335   GO:0005534   GO:0006012   GO:0016021   GO:0046872   GO:0007219   GO:0007275   GO:0050793   GO:0003676   GO:0016876   GO:0043039  

PANTHER

PTHR10457:SF6  

Length:

265

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00410999999999999

Exp number, first 60 AAs:

0.00391

Total prob of N-in:

0.03696

outside

1  -  265

 

 

Pi

191.738159

Theta

172.267702

Tajima's D

0.316445

CLR

0.544008

CSRT

0.459877006149693

Interpretation

Uncertain