Silkworm Genome Informatics Database

Gene

KWMTBOMO08700

Pre Gene Modal

BGIBMGA005007

Annotation

reverse_transcriptase_[Danaus_plexippus]

Location

Bomo_Chr15(-):2932645-2938503 View in EpiBrowser

Location in the cell

Nuclear Reliability : 1.474

CDS

ATGATGATGGCCAATTGTGAAAAGTTAGTACCCCAGGAGGGTACCGCCTGCGAGTCGGGCGGAGAATCCCTCCGTGCTTCCACCTCGGTGGAAGCACGCTGCCCCACGTATTCTGGGGGGGGCAACAATTGCCAAGATGAAGGAGGCTGTGCGACGGGCAGCGGAATTCCCGTCGAACCGATGCGCTCCCTGATCGCCGGCTCGATGCGCTCTGCGCTCGCCAGCGAATCGGTTGCGATGAACCCCACCAAACCATCGGCGGGGAAAAAGAGGGGCCGAAGGAAGATCCCCGTAGCAGCTTCCGACGACGGCGGTGCGTCATCCTCCAGCACCGAGGTGCCGGAAAAGACCATGGCCGTCGAGGAGGTGGCTCCGGTGATTTCGGGGCCTGCCGCGTCGAAAGATACGATGCCCGCACCCCAGTGGGCACCAGTGAGGAGGAGGGGCGCAGTGTCACCGGCGACGTCGATGGAGTCGATGTCGACGTCGGCCGCGTCCCTGGCTAGCGGGGACGAGGCATTCCGCGACCTCGACCATGCCCTGGTCAATCTGGCTAAGTTGCTGTCGACCGTGGCTGCCAAGGGCGCCGAGCCAGGCAGCAGCTACCGGAAGAGGCTCCGGGAGGGAGCCGCTAGGGTTAGGACGAAGCTGATCCCTACCATGTCCAAACTCGTAGCGCAGCTTGACTCCAGGGAGAGTCGCATTCTGGGGGGCTCCCCAGCCTTGCGAGAGGGGACTTCCTTGTCGCCGATGCCTGCGCTGGCACGCTCTGAGCCACCCGTGAGGAAGATGGACACCAGCGCGCCTTCTCGGGCTGGGATGAGTGTGGCGGCGCTCATGCCAGCGCCCACTTCTGTTCCGCGCGTGCCTACTCCCGCGCTCCCTCGCCCCCCTCGGAGGGTTGAGTTAAGGCCTGCGCCGCCTTCCCGGATATCGGCCGCCCCTGCATCCATACAGGCAGGAAGGTTAAGGACTGAGGACATCCGCTCGCCGCTGGCGAGAATGGTAGACGAGTGGCCGGCGCTGCCACGGCCCAGGTCTTCGGAGCCGCCTCTTTCGCCCCCACGTGCTGCAGGGTCGCAGAGGCCTTATAACATGGCTGCTGAAATGGGGGGAGTGGATCACTCCCTCCCAAGCAGACAGGAAATGATGGCCTGCATCTCGCGGGCGGTGGCGGTTGAGGTCGGCAAACACTTGGCTGGCCTTGAGGAGATGCTCCGCTCCTCGATTGGTTCCAGAGACTGCGTCCCTGTACCAACAGCGGCGACCGCCCCGCGGGACCAGGCCACCCAGCCGACCTCCACTTCTACCCCATCCGCGAGGGTGGCACGACATGGAAGCCGGAATCAGCATAACAGAGGTGCGGGCGCCCAGAATCCCGCCCCGCGATTCCAACCTCAGCCCCGTGTCCTTCCTCCCCCCCCGTCAAGTATGGACGAGGGCTGGACGGAAGTGGTGAAGCGGGGCACCAAAAGATTGCGACAGACAGCAGCTCTGGCAGCTCCCCAAGGGGGTCGAGCGCCGACTGCTGTTACCCGAAACACAGCGCTGGCGGCCGTGGCTGCTCCCCGCGAGGGTCGAGCACCGGCCGCTAGCAAGACCAAAAACAAGAAGAAGAAGCCGCGCGCAGCGGGGTCGGCTGCCGTTGTAGTGACGTTGCTGCCGGCCGCCATCGAAAAGGGCCTCACGTATAATGAGGTTATGGCCCGGGCGCGCGCGGCCGTAAGCTTGGAAGAAATCGGAGCAGAGGAGGGCCTCCGCTTCCGGCACACAGCCAATGGGGCGAAGCTATTGGAGTGTCCCGGTGCCGATAGTTCTGGCATCGCGGACAAACTAGTGGCGACGCTCCGCGTGGCGTTGCCGGAGGAAGAGGTGCGCGTGCACAGGCCGTTGAGGATGGCCGAGATTAGGATCACCGGCCTAGACGACTGCGCCACCAAGGAGGAGGTGGCAGCTGCGATAGCGGCCCAGGGGAGATGTGCCCCAGAGAGCGTGACCGTGGGCGAACTTCGCTCAGGGTACTCCGGGGCCAGGTCAGCGTGGGCGCGCTGCCCTGTGGAGGCGGCCATTTCCTTGGCCACTCCTCCACCGGGAAGATCGACGGGGGATCCGGGGAGACTGCGCGTGGGCTGGATAGCGGCCCACGTGCGTCTCCAAGAACCACGTGCCTGGCGATGCCTTCGGTGCTTCAGCACGGGGCACGGACTCGCTAGGTGCACCAGCTCGGTTGACCGCAGCGGTTTGTGTTTCCGCTGCGGCCAGCCGGGCCATAAAGCTGCGTCCTGCACGGCCGCCCCGCATTGCGCTCTGTGCGCTGCAGCCGGACGCAGGGCAAACCACCGGGCGGGAGGCAAGGCGTGTTTCCCGTCCGGTAATAATACCGAACGCAACCGGCGCCGAAAATCGAAGCGCCGGCAAAAGAGAAGGTTGGCCAGAGGAGCACTGGCCAACGCTGTAATCCCCGCTGCGGCGCTGGTGCCGAAGGGCGGTGGCAGCGGAAACCTGAACCACTCCGCCAGAGCTCAGGACATGCTGTCTCAGAGCATGGCGGAGTGGTCCATAGATGTGGCTGTGGTCGCCGAGCCGTACTTCGTTCCCCCAGCAAATGATTGCTGGTTTGGGGACGACGGCGGCCTGGCGGCCATCGTCATAAGAAGAGACGCGGCGATCCCCCCCCTGGCGATGGTGACCAGGGGTCAAGGGTTCGTCGCGGTGCAGCTGGAAGGGACCGTCGTGATCGGGGCGTACTTCTCTCCGAACAGGTCTACCGTCGAGTTCGGGCATTTCCTGGGCGGGATCGGGGCGATTGCTCGCCGCCTCGCTCCTCGTCCAGTGATTCTCGCGGGGGACCTCAATGCGAAGTCTATCGCATGGGGCTCCCCCCGCTCGGACGCTCGTGGTAGGCTACTGGAGAGGTGGGCGAACGCGGCCGGCCTCTGTTTGTTGAATAGAGGATCGGTTGCGACGTGCGTGCGGTGGCAGGGCGAGTCTATTGTGGACGTTACGTTCGCGAGCCCGGCCATCGCGCGCCGTATCCGCGACTGGAGGGTTTTGGAGGGGGCGGAGACGTTGTCAGATCACCGATATATTCGGTTTGATCTCTCCGCCCGCTCCGCAGTCGCGGACGCCCTCGGGGACCACCCCCGTGGTGCGTCCCGGTCATTCCCCAAGTGGGCACTGAAGCGCCTGAATAAGGAGCTCCTGATGGAAGCCTCTACAGTGGCGGCGTGGGCGCCCATGCGTCCACACCCGGTCGAGGTCGAGGGCGAGGCAGGGTGGTTTCGGGACACGATGCGTCGCATCTGTGATGTGTCGATGCCCCGGATCGGCCCTCGACTTCCTAATCGCCAGGCGTACTGGTGGTCGCCCGAAATTGCGCAAATCCGCGTGGAGTGCGTTCGGGCGAGGCGCGAGTGCGCCAGGCATCGCCGCCGCCGCCTGCCGCGGCGCAACGATCCAGTTGCGTTCGCGGCGGCAGAGGCCCGGCTGCACGCCGCATTTCGCGTCGCGCAGAGGGCACTGCAGCTGGCCATCAGAAGAGCCAAGGATCAACACATGGAGGGTCTCCTGGAGACGCTGGATGAGGATCCGTGGGGGCGGCCCTATCATATGGTGCGCAATAAAATGCGCCCATGGGCCCCTCCGATCACGGAGCGTCTCCAGCCTCAAAAGCTGCGGGACATCGTCTCGACGCTGTTCCCGCAGGAGCGGGAGGGATTTGTCGCTCCCGCTATGGACTCGCCGCCGGAATACGACGGCGAAGTCCCTGCCGAGGTGCCCCATATAACGGGGGCGGAGCTCCGTGTGGCCGTGCGCAAAATGTGCGCGAAGGACACTGCACCCGGTCCGGACGGCGTCCATGGCCGGGTTTGGGCCTTGGCTCTTGGTGCCCTGGGGGACCGACTCTTGAGGCTTTACAACTCCTGCCTCGAGTCGGGACGGTTTCCTTCATCGTGGAGGACGGGCAGACTCGTGCTGTTGAGAAAGGAGGGGCGCCCGGCGGATACTGCCGCCGGGTACCGTCCCATCGTGTTGCTGGATGAGGTGGGCAAGCTGCTGGAACGCATTCTGGCAGCCCGCATCATCCAGCATCTGGTCAGGGTGGGACCCGATCTGTCGGCGGAGCAGTATGGCTTCCGAGAGGGCCGCTCAACGGTAGACGCGATCCTTCGCGTGCGGGCCCTCTCGGATGAGGCCGTTTCCGGGGGTGGGGTGGCTTTGGCGGTGTCACTCGATATCGCCAATGCGTTCAACACCCTGCCCTGGTCCGTGATAGGGGGGGCGCTGGAACGACACGGAGTGCCCCCCTACCTTCGCCGGCTGGTGGGTTCCTACTTGGAGGACAGATCGGTCACGTGTACCGGACACGGTGGGATCGTGCACCGGTTCCCGGTCGTGCGCGGTGTTCCACAGGGGTCGGTGCTCGGCCCTCTTTTGTGGAATATCGGGTATGACTGGGTGCTGAGGGGTGCCCTCCTCCCGGGCCTGAGCGTAATCTGTTACGCAGACGACACGTTGGTCGTGGCCCGGGGGGGGAGTTTTGCTGAGTCTGCCCGTCTTGCTACGGCTGGGGTGGCGCATGTCGTCGGCAAAATCAGGAGATTGGGCCTCGACGTGGCGCTCAGTAAATCCGAGGCCATGTGGTTCCACAGGCCCCGGAGAGTGCCACCTGTCGATGCCCATATCGTGGTTGGAGGCGTCCGTATCGGGGTCGGGGTGCAGTTGAAGTACCTCGGCCTCATTCTAGACAGTCGTTGGACCTTCCGTGCTCACTTTCAGAATCTGGTCCCTCGTTTGTTGGGAGTGGCCGGCGCGTTAAGCCGGCTCCTTCCCAATGTTGGGGGGCCTGACCAGGTGACGCGCCGTCTCTATACAGGGGTGGTGCGATCAATGGCCCTATACGGGGCGCCCGTGTGGGGCCAGTCCCTGGCCGTGGGGGTAGCGAAGCTGCTGCAACGGCCGCAACGCACCATCGCGGTCAGGGTCATCCGTGGTTATCGCACCATCTCTTTCGAGGCGGCGTGTGTACTGGCTGGGACGCCGCCTTGGGTCCTGGAGGCGGAGGCGCTCGCTGCTGACTATCAGTGGCGGGCTGACCTTCGTGTCCGGGGCGTGGCGCGTCCCAGCCCCAGTGTGGTCAGAGCACGGAGGGCCCAATCTCGGCGGTCCGTGCTGGAGTCATGGTCTAGACGGCTGGCCGATCCTTCGGCTGGTCGTAGGACCGTCGAGGCGATTCGCCCGGTTCTTGTGAACTGGGTGAATCGTGACAGAGGACGCCTCACTTTCCGGCTCACGCAGGTGCTCACTGGGCATGGTTGCTTCGGTGAGTTCCTGCACCGGATCGGAGCCGAGCCGACGGCAGAGTGCCACCATTGTGGTTGCGACTTGGACACGGCGGAGCACACGCTCGTCGCCTGCCCCGCATGGGAGGGGTGGCGCCGTGTCCTCGTCGCAAAAATAGGAAACGACTTGTCGTTGCCGAGTGTTGTGGCATCGATGCTCGGTGACGACGAGTCGTGGAAGGCGATGCTCGACTTCTGCGAGTGCACCATCTCGCAGAAGGAGGCGGCGGGGCGCGTGAGAGACGCACAGGCCCGCCGCCGTCGAGCGGGGGCCAGGGAGGCGGATATCGCCCAAGCCCTGGCCCTCTAA

Protein

MMMANCEKLVPQEGTACESGGESLRASTSVEARCPTYSGGGNNCQDEGGCATGSGIPVEPMRSLIAGSMRSALASESVAMNPTKPSAGKKRGRRKIPVAASDDGGASSSSTEVPEKTMAVEEVAPVISGPAASKDTMPAPQWAPVRRRGAVSPATSMESMSTSAASLASGDEAFRDLDHALVNLAKLLSTVAAKGAEPGSSYRKRLREGAARVRTKLIPTMSKLVAQLDSRESRILGGSPALREGTSLSPMPALARSEPPVRKMDTSAPSRAGMSVAALMPAPTSVPRVPTPALPRPPRRVELRPAPPSRISAAPASIQAGRLRTEDIRSPLARMVDEWPALPRPRSSEPPLSPPRAAGSQRPYNMAAEMGGVDHSLPSRQEMMACISRAVAVEVGKHLAGLEEMLRSSIGSRDCVPVPTAATAPRDQATQPTSTSTPSARVARHGSRNQHNRGAGAQNPAPRFQPQPRVLPPPPSSMDEGWTEVVKRGTKRLRQTAALAAPQGGRAPTAVTRNTALAAVAAPREGRAPAASKTKNKKKKPRAAGSAAVVVTLLPAAIEKGLTYNEVMARARAAVSLEEIGAEEGLRFRHTANGAKLLECPGADSSGIADKLVATLRVALPEEEVRVHRPLRMAEIRITGLDDCATKEEVAAAIAAQGRCAPESVTVGELRSGYSGARSAWARCPVEAAISLATPPPGRSTGDPGRLRVGWIAAHVRLQEPRAWRCLRCFSTGHGLARCTSSVDRSGLCFRCGQPGHKAASCTAAPHCALCAAAGRRANHRAGGKACFPSGNNTERNRRRKSKRRQKRRLARGALANAVIPAAALVPKGGGSGNLNHSARAQDMLSQSMAEWSIDVAVVAEPYFVPPANDCWFGDDGGLAAIVIRRDAAIPPLAMVTRGQGFVAVQLEGTVVIGAYFSPNRSTVEFGHFLGGIGAIARRLAPRPVILAGDLNAKSIAWGSPRSDARGRLLERWANAAGLCLLNRGSVATCVRWQGESIVDVTFASPAIARRIRDWRVLEGAETLSDHRYIRFDLSARSAVADALGDHPRGASRSFPKWALKRLNKELLMEASTVAAWAPMRPHPVEVEGEAGWFRDTMRRICDVSMPRIGPRLPNRQAYWWSPEIAQIRVECVRARRECARHRRRRLPRRNDPVAFAAAEARLHAAFRVAQRALQLAIRRAKDQHMEGLLETLDEDPWGRPYHMVRNKMRPWAPPITERLQPQKLRDIVSTLFPQEREGFVAPAMDSPPEYDGEVPAEVPHITGAELRVAVRKMCAKDTAPGPDGVHGRVWALALGALGDRLLRLYNSCLESGRFPSSWRTGRLVLLRKEGRPADTAAGYRPIVLLDEVGKLLERILAARIIQHLVRVGPDLSAEQYGFREGRSTVDAILRVRALSDEAVSGGGVALAVSLDIANAFNTLPWSVIGGALERHGVPPYLRRLVGSYLEDRSVTCTGHGGIVHRFPVVRGVPQGSVLGPLLWNIGYDWVLRGALLPGLSVICYADDTLVVARGGSFAESARLATAGVAHVVGKIRRLGLDVALSKSEAMWFHRPRRVPPVDAHIVVGGVRIGVGVQLKYLGLILDSRWTFRAHFQNLVPRLLGVAGALSRLLPNVGGPDQVTRRLYTGVVRSMALYGAPVWGQSLAVGVAKLLQRPQRTIAVRVIRGYRTISFEAACVLAGTPPWVLEAEALAADYQWRADLRVRGVARPSPSVVRARRAQSRRSVLESWSRRLADPSAGRRTVEAIRPVLVNWVNRDRGRLTFRLTQVLTGHGCFGEFLHRIGAEPTAECHHCGCDLDTAEHTLVACPAWEGWRRVLVAKIGNDLSLPSVVASMLGDDESWKAMLDFCECTISQKEAAGRVRDAQARRRRAGAREADIAQALAL

Uniprot

NA

ProteinModelPortal

NA

PDB

1WDU E-value=8.4294e-10, Score=159

KEGG

105841474 no KO assigned | (RefSeq) uncharacterized LOC105841474

GO

GO:0003676 GO:0008270 GO:0046872 GO:0007219 GO:0007275 GO:0050793 GO:0016876 GO:0043039

Length:

1883

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.18799

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00050

outside

1 - 1883

Pi

234.152077

Theta

115.71539

Tajima's D

1.436259

CLR

247.132934

CSRT

0.772761361931903

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree