Gene

KWMTBOMO08696

Pre Gene Modal

BGIBMGA007659

Annotation

putative_zinc_finger_protein_45-like_protein_[Operophtera_brumata]

Location

Bomo_Chr15(+):2670956-2672537      View in EpiBrowser

Full name

Zinc finger protein      

Transcription factor

zf-C2H2

Location in the cell

Nuclear   Reliability : 4.588

CDS

ATGGAAGAAGATAACAAGAATTCGTTTAAAGTTTGTCGTGTTTGTTTGGGATGTTACCCGAGTGATGATTGCTTGTCATTGTTCCATGTAGAAAACGGTCGCGCGATATCGGATTTGATAATATCAATCGCAAAAGTAGAAATAGTTAAAGGTGACTCCTTACCCGACTGTATCTGCAACGAGTGTTTTCACGAACTGGAAAAGGCTGTAAAGTTCAAACAAAAATGTGAACATTCCTATTTCACGTTAATTAACGATACATTTAAGAACCCTTTGATTCCGAAAGTAGATATAAAGGAGGAATTATCATTTGACAATAACTGTGAATTTGATACATCGTTTCATGAAAACAGTGTTGAGACCGAATTTGAAATTGAAGACAAGAATATTAAAAAGAGCAGAGCCAATGATTTGAGTTTAGAATGTCATGATTGTGGAGAGTTATTTAAAAGTAAATGCAAGCTGAGAGTACATTGGAAAAGGGCCCACCAGAGCAGCTATTTAAAGTGTGAACGATGCAAACGTCAGTTCAAATCATTTAAAGCATATAATTTACACAAGAAAATAAGTCCTGCTAGTTGTACTGTGGCCAAATTCATTAGGATTGAGGGCGAAGGTAAAAACCGCATGTTCTACTGTAAGGATTGTGATTATAAATCGATCAGAGTTAAAGATATGATGAATCACTACTTATGTCACAGTGGTGAGAGACCGTTCACATGTTCTATATGTTTAAAGACATTCACCCAACATAGTTCACTTAGCAGTCATCAAGAAAATGTCCACAAGCTTTATAAAGTAGAAGGCACTTGTCATGTATGCGGAAAATACCTTAAAGGTCGAAACAAGTTCTACAAACATTTAAAAGGTCACTCAGAAAAGAATCAACAGTGTGTAATATGTAATAAAATATTCAAAACGAAGAAAACATTGAAAGTGCACATGCAAAGGCATGCTGATATTAAAACGTTGTCATGTGAAATATGTGGATCGAGATACTACACTATATCAGATCTGTGTAACCACAAAAGAAATGTACATTTTAAGGATAGCAAAGTTTATAAATGTGATTTATGTGAATACGTAGCAAACAAGAATGAAACGATAAAGAAGCACAGAGCGAAACACACGGGTGCTAACATACCGTGTTTGGTATGCGGAGTGTTTTTGGAGAATGAAGAAACATATCTTCTGCATCAAAAACGTCATACTGATAAACAATTCCAATGCACGTTGTGTGAGAAAAGTTTCTACAGGAAACGATATCTTAATGATCACATGAGAAAGAAACATGGACACGGAGAATCTGGACCAAAAGCTCTTACTAAAAAGATACAAGTAAAAAAAGAAAGCTCTGTTATCATACAATATGAGGATATTAATTCATTATCACCTACTGTGATAGATTAG

Protein

MEEDNKNSFKVCRVCLGCYPSDDCLSLFHVENGRAISDLIISIAKVEIVKGDSLPDCICNECFHELEKAVKFKQKCEHSYFTLINDTFKNPLIPKVDIKEELSFDNNCEFDTSFHENSVETEFEIEDKNIKKSRANDLSLECHDCGELFKSKCKLRVHWKRAHQSSYLKCERCKRQFKSFKAYNLHKKISPASCTVAKFIRIEGEGKNRMFYCKDCDYKSIRVKDMMNHYLCHSGERPFTCSICLKTFTQHSSLSSHQENVHKLYKVEGTCHVCGKYLKGRNKFYKHLKGHSEKNQQCVICNKIFKTKKTLKVHMQRHADIKTLSCEICGSRYYTISDLCNHKRNVHFKDSKVYKCDLCEYVANKNETIKKHRAKHTGANIPCLVCGVFLENEETYLLHQKRHTDKQFQCTLCEKSFYRKRYLNDHMRKKHGHGESGPKALTKKIQVKKESSVIIQYEDINSLSPTVID

Uniprot

H9JDR2   A0A0L7KPD6   A0A0L7KW38   A0A1E1WHL7   A0A194RAM8   A0A2A4JS57   + More
A0A194PWB1   A0A1E1WL68   A0A194QMD2   S4PY48   A0A1Y1MJT1   A0A2A4K5K8   A0A212F100   A0A437AYJ9   A0A2H1VQD8   A0A0T6AUE3   D6WKU4   A0A3B5RD16   D6WN06   A0A1W4XDG1   A0A1Y1LIK8   A0A3Q4AR88   A0A0N0PDJ0   H0WEF3   D2A101   A0A3Q3WE44   H0WF26   F1R2I1   F1QEA5   A0A3P9L6S7   F6PWN3   A0A1W4X311   A0A146Q6G1   E7FC60   H0WE95   A0A2A4J0T1   A0A0G2KS04   A0A0L8H0W0   A0A146Q4P7   A0A2R8RHP4   A0A3Q2QMI0   A0A3Q3BL37   U4URS6   A0A2R8QMI2   N6TL40   A0A3Q4AR89   A0A3Q3VV05  

EC Number

2.1.1.-

Pubmed

19121390    26227816    26354079    23622113    28004739    22118469    + More
18362917    19820115    23542700    23594743    17554307    20431018    23537049   

EMBL

BABH01003144    JTDY01007970    KOB64829.1    JTDY01005133    KOB67340.1    GDQN01004596    + More
JAT86458.1    KQ460473    KPJ14554.1    NWSH01000676    PCG74877.1    KQ459596    KPI95420.1    GDQN01003453    JAT87601.1    KQ461195    KPJ06698.1    GAIX01003913    JAA88647.1    GEZM01034914    GEZM01034913    GEZM01034912    GEZM01034911    GEZM01034910    GEZM01034909    GEZM01034908    GEZM01034907    GEZM01034906    GEZM01034905    GEZM01034904    GEZM01034903    JAV83537.1    NWSH01000105    PCG79511.1    AGBW02011012    OWR47384.1    RSAL01000266    RVE43251.1    ODYU01003824    SOQ43063.1    LJIG01022774    KRT78787.1    KQ971343    EFA04018.2    EFA03255.2    GEZM01056306    JAV72731.1    KQ460326    KPJ15702.1    BX855613    KQ971338    EFA01603.2    BX296567    CT027586    BX571813    AAMC01144084    AAMC01144085    AAMC01144086    AAMC01144087    AAMC01144088    AAMC01144089    GCES01134453    JAQ51869.1    BX914214    BX928743    NWSH01004519    PCG65022.1    KQ419623    KOF82832.1    GCES01135348    JAQ50974.1    AL807749    CABZ01060110    FO681350    KB632411    ERL95228.1    APGK01032711    KB740848    ENN78673.1   

Proteomes

UP000005204    UP000037510    UP000053240    UP000218220    UP000053268    UP000007151    + More
UP000283053    UP000007266    UP000002852    UP000192223    UP000261620    UP000000437    UP000265180    UP000008143    UP000053454    UP000265000    UP000264800    UP000030742    UP000019118   

PRIDE

H9JDR2   

Pfam

PF07776   zf-AD        + More
PF00096   zf-C2H2
PF01352   KRAB

Interpro

IPR012934   Znf_AD        + More
IPR036236   Znf_C2H2_sf       
IPR013087   Znf_C2H2_type       
IPR017114   YY-1-like       
IPR003656   Znf_BED       
IPR017125   Znf_PRDM5-like       
IPR036051   KRAB_dom_sf       
IPR001909   KRAB       

SUPFAM

SSF57667   SSF57667        + More
SSF109640   SSF109640       

CDD

cd07765  KRAB_A-box

ProteinModelPortal

H9JDR2   A0A0L7KPD6   A0A0L7KW38   A0A1E1WHL7   A0A194RAM8   A0A2A4JS57   + More
A0A194PWB1   A0A1E1WL68   A0A194QMD2   S4PY48   A0A1Y1MJT1   A0A2A4K5K8   A0A212F100   A0A437AYJ9   A0A2H1VQD8   A0A0T6AUE3   D6WKU4   A0A3B5RD16   D6WN06   A0A1W4XDG1   A0A1Y1LIK8   A0A3Q4AR88   A0A0N0PDJ0   H0WEF3   D2A101   A0A3Q3WE44   H0WF26   F1R2I1   F1QEA5   A0A3P9L6S7   F6PWN3   A0A1W4X311   A0A146Q6G1   E7FC60   H0WE95   A0A2A4J0T1   A0A0G2KS04   A0A0L8H0W0   A0A146Q4P7   A0A2R8RHP4   A0A3Q2QMI0   A0A3Q3BL37   U4URS6   A0A2R8QMI2   N6TL40   A0A3Q4AR89   A0A3Q3VV05  

PDB

5WJQ     E-value=3.64407e-15,     Score=199

KEGG

101743837    no KO assigned | (RefSeq) zinc finger protein 62 homolog

GO

GO:0008270   GO:0003676   GO:0005634   GO:0003677   GO:0046872   GO:0000976   GO:0003700   GO:0045893   GO:0043565   GO:0045944   GO:0045892   GO:0007219   GO:0007275   GO:0050793   GO:0016876   GO:0043039  

Length:

469

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00145

Exp number, first 60 AAs:

0.00039

Total prob of N-in:

0.00708

outside

1  -  469

 

 

Pi

157.703127

Theta

112.740476

Tajima's D

0.27698

CLR

86.469519

CSRT

0.450977451127444

Interpretation

Uncertain