Silkworm Genome Informatics Database

Gene

KWMTBOMO08687

Pre Gene Modal

BGIBMGA007654

Annotation

Uncharacterized_protein_OBRU01_15149_[Operophtera_brumata]

Location

Bomo_Chr15(+):2494142-2495179 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.069

CDS

ATGCTCAATCCGGACCCGGTTATTAAAGAAAAGATATGCATGATCCTCACTCACCTGGCGTCTTACTACCAAGGTAGAAAGCAGATTATGTCTAGGCCTATCATCATAGAAAATCTCATGTGGCTGATGATGCGGGAAAGAAAGGAGATACGTTACGCTGCTGCTTACACTCTAAGGACTTTAGCAAGAGACCGGTGTGCCTGCGAAATCCTGATCGAGAATGAAAAAATTGTCGACAATCTCCTGAAAACAATCAAAAACGATCATAAAGGGATTATTCTGTTGCATTTAAAGACATTAACAAACCTTGCGGAATGGGATCCTGTCATACCGCTGAAGTCCAACGCTTTTCGTATAATGCTAGTGCTGTTTGATGATTTTGATCCAAGAATAGTGGCCGGTGCGATGGATTGCATGACACAACTTTGCAAACACGACGTCGGAAAAATACTGGCCGACGAGAACGATTTAGTGTTTAAATTGAAAAAGTATTTAACATCGAAACACATTGAAATCATCATCAGCGCTGTGTGTCTGTTGAATTATACAACTTTGACGACGCGTTCAAAATGGCGGGCTAAGGAATGTTGTTACGAACTGACGAGACTTCTCGTAAATTTGTGCCACGTTCCAAACTTGCCGCCATTACAAATAAACGCTATGCATGTCTTAATTAATCTTTGCGACTGCCCCGACGTTAGGTATCATTTGAAAAAATATTGGGAGAATAAAATAAAAGCAATCAGAATAAGGACGGACGAACAATGGGATGGAACGAGTGAGACGACGAGTTACGGATTCGAAACAGGACATAATTACAGGACCATGTGTATAGAAGGCGTGGAAACGATTAAAAATGATGGCGGCAATGATTTGGAATGCCTTAACGTATCTAGTTACCTGCGCAGAGTCTGTGAAGTGAAGGAGAAGTTGATTCGTGCCATTAATTGGAAATGTTACATAGATTAG

Protein

MLNPDPVIKEKICMILTHLASYYQGRKQIMSRPIIIENLMWLMMRERKEIRYAAAYTLRTLARDRCACEILIENEKIVDNLLKTIKNDHKGIILLHLKTLTNLAEWDPVIPLKSNAFRIMLVLFDDFDPRIVAGAMDCMTQLCKHDVGKILADENDLVFKLKKYLTSKHIEIIISAVCLLNYTTLTTRSKWRAKECCYELTRLLVNLCHVPNLPPLQINAMHVLINLCDCPDVRYHLKKYWENKIKAIRIRTDEQWDGTSETTSYGFETGHNYRTMCIEGVETIKNDGGNDLECLNVSSYLRRVCEVKEKLIRAINWKCYID

Uniprot

H9JDQ7 A0A0L7L4Z6 A0A3S2P250 A0A212FGV5 A0A2W1BHV1 A0A194PRN7 + More
A0A2H1W6H3 A0A194RBB5 A0A2W1BMC4 A0A2W1BNI2 A0A2A4JKC5 A0A2A4JL78 A0A2A4JLS7 A0A2H1W6S7 A0A2H1W6C7 A0A139WJ75 A0A1W4XC82 A9V9U5 A0A1B6E6G8 A0A1B6E9H8 A0A267H2B6 A0A1I8IFF9 A0A1I8IBN6 A0A267GNA6 A0A2Y9E4V6

Pubmed

19121390 26227816 22118469 28756777 26354079 18362917 + More
19820115 18273011 26392545

EMBL

BABH01003155 JTDY01002873 KOB70563.1 RSAL01000001 RVE55178.1 AGBW02008589 + More
OWR52981.1 KZ150050 PZC74428.1 KQ459596 KPI95414.1 ODYU01006636 SOQ48658.1 KQ460473 KPJ14560.1 PZC74427.1 PZC74426.1 NWSH01001118 PCG72525.1 PCG72526.1 PCG72524.1 SOQ48656.1 SOQ48655.1 KQ971338 KYB27847.1 CH991571 EDQ85727.1 GEDC01020862 GEDC01003758 JAS16436.1 JAS33540.1 GEDC01002731 JAS34567.1 NIVC01000052 PAA92405.1 NIVC01000264 PAA86782.1

Proteomes

UP000005204 UP000037510 UP000283053 UP000007151 UP000053268 UP000053240 + More
UP000218220 UP000007266 UP000192223 UP000001357 UP000215902 UP000095280 UP000248480

PRIDE

H9JDQ7

Pfam

PF10508   Proteasom_PSMB        + More
PF05285   SDA1
PF08158   NUC130_3NT
PF00514   Arm
PF12717   Cnd1

Interpro

IPR016024   ARM-type_fold        + More
IPR011989   ARM-like
IPR019538   PSMD5
IPR027312   Sda1
IPR007949   SDA1_dom
IPR012977   Uncharacterised_NUC130/133_N
IPR000225   Armadillo
IPR032682   Cnd1_C

SUPFAM

SSF48371 SSF48371

Gene 3D

1.25.10.10

ProteinModelPortal

H9JDQ7 A0A0L7L4Z6 A0A3S2P250 A0A212FGV5 A0A2W1BHV1 A0A194PRN7 + More
A0A2H1W6H3 A0A194RBB5 A0A2W1BMC4 A0A2W1BNI2 A0A2A4JKC5 A0A2A4JL78 A0A2A4JLS7 A0A2H1W6S7 A0A2H1W6C7 A0A139WJ75 A0A1W4XC82 A9V9U5 A0A1B6E6G8 A0A1B6E9H8 A0A267H2B6 A0A1I8IFF9 A0A1I8IBN6 A0A267GNA6 A0A2Y9E4V6

KEGG

101744327 no KO assigned | (RefSeq) uncharacterized LOC101744327

GO

GO:0016021 GO:0043248 GO:0000055 GO:0042273 GO:0030036 GO:0005634 GO:0005488 GO:0030154 GO:0005515 GO:0005509 GO:0007219 GO:0007275 GO:0050793 GO:0003676 GO:0016876 GO:0043039

PANTHER

PTHR12730

Length:

322

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.21541

Exp number, first 60 AAs:

0.01404

Total prob of N-in:

0.01111

outside

1 - 322

Pi

227.176573

Theta

164.772327

Tajima's D

1.191113

CLR

58.631607

CSRT

0.706264686765662

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics