Gene

KWMTBOMO08686

Pre Gene Modal

BGIBMGA007653

Annotation

PREDICTED:_hyaluronan-mediated_motility_receptor_[Bombyx_mori]

Location

Bomo_Chr15(+):2475532-2490175      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.575 Nuclear   Reliability : 1.904

CDS

ATGGGGACGTGTTATGAAAAACATCCATTTGAGATCGAAACTGAGGACCGTCTCACATCTATAAACACGAAAATATACGAAATCAAAAAGAAAATACAGCTGTCAGAGGGCCAAAGGAAATCTAATTACGAAGAAAACGAAGCCGAGAAACAGCAGAACAATGATCTAATAGAGGCGCTGAAGAGGGAGATAAAGTCACGTGTCGCCGAACTGATACAAGCTAGATCAGCTATAGGAGAAGACGAAGTACATGTCAAGAAGTACTTGAATGACATATGTCCTATTGGAGACAAAACAGCGGATCAGATAGCCCATAATTTAGATCTAAAAGTCATTGAACAGCGTAAAATGTTGGATCTACTGAAATACGAGAGACGCAGTAAAAAGAGGAGACTCACGGAACTGGAGAAAGAATACGAAAGCCTCTTGATTGAGAACAGCAAAGGTGAACTTGTCAAATCGAAAATTTCTAGTCGCGCCAGAAAGCTCGTTTCGCATTTAGAGAACGAAATTCATAAAGTGTTAATACAATGGACAGAAGCGGAACTGGTCAAGAAAAAGTACTTTTCTATCAGACAAGCCCTCATTGATGACTCAGTCAAATTCGAAAGTTCCTTGTCACGTATTGAAGATCTATTGAACAAACAACGAGATGAAATTAAAAAACTTGAGTATGTACGGGAAGAGGCCGCGGAGATGCGTATCCGCGCGACAGCGGCTACGGCCGCGGAGGCTGCACGTGCTCACGATGCAGAACACGCACGAGCTACGGAAAGAGCCTACTTCTCTCAAAGATTCGGCGAGAGAAAACGGGAACTTGAGAAGTTGGAGAAAAGAGTATTTCCGCCCAACAGTCGATCAGTGGTTCGTCAAGAGTCTACCAGATCAGATCGGGAAGCCGAAGCGGTATCCGAGGAAGCATCAGCCGCAGCTCAGATGGAAGACATTTTCCAGAAACTTATGAAATTAACTGGTGTCACAAATCCTGAAGAAGTGTTCGACAGGTTCCGCGCCCAGCGCGACACCTGCAAACGACTGAGCTACCTCCAGCAGACCACCGAAGAAGAGAAACTGGACCTCGAGCAGAGACAAACGACGCTGATGGCCGAACTGGAAGCTTTCAAATTCGCTTCAGTCAAAGACAAAGATGAGGGTCAAGATCAAATCAACGACTTAAAGATCGAAATACAGAAAGAGCAGGATATTCACGATGAACTACAGAAGAAAATAGACGATCTCGAAACATTTCTACTCGAAATCAAGAGATTGCTCCACGACCTCTGCAAGTTATTAGATTTGATACAGGAGCCGTCAGTGCCAGAATGGACAGCAGAAGCGCGCGACGTCCATGAATTGGTGGTGGTGCTCACATCTAGATACGAAAAAGCCAAAGCTAGATCTGATGAGATCAAGGAGAAGAATAAGGATGTTACTACGATCATAGTGCCTTCTAATCAAACTAGCGCGGCCGCTTCCGTGGCTGGACTCAGCGTGCACAGTCATAGCACGCCTAAGGAGTCTGACAAGCAAATACCAACCTATAAGGAGCTCTTGCAAAAGGAACCTGTCAGAGCACCACCATCCGATGAAGAGGAAGACATCCCGTCAAGATGCTATCTGAAGAGGCAAGCTCAAGTTATTGTCGATACCAAATGCAGAAGAAAAGGATTCCGTCCATTCCAGAGGCGATAA

Protein

MGTCYEKHPFEIETEDRLTSINTKIYEIKKKIQLSEGQRKSNYEENEAEKQQNNDLIEALKREIKSRVAELIQARSAIGEDEVHVKKYLNDICPIGDKTADQIAHNLDLKVIEQRKMLDLLKYERRSKKRRLTELEKEYESLLIENSKGELVKSKISSRARKLVSHLENEIHKVLIQWTEAELVKKKYFSIRQALIDDSVKFESSLSRIEDLLNKQRDEIKKLEYVREEAAEMRIRATAATAAEAARAHDAEHARATERAYFSQRFGERKRELEKLEKRVFPPNSRSVVRQESTRSDREAEAVSEEASAAAQMEDIFQKLMKLTGVTNPEEVFDRFRAQRDTCKRLSYLQQTTEEEKLDLEQRQTTLMAELEAFKFASVKDKDEGQDQINDLKIEIQKEQDIHDELQKKIDDLETFLLEIKRLLHDLCKLLDLIQEPSVPEWTAEARDVHELVVVLTSRYEKAKARSDEIKEKNKDVTTIIVPSNQTSAAASVAGLSVHSHSTPKESDKQIPTYKELLQKEPVRAPPSDEEEDIPSRCYLKRQAQVIVDTKCRRKGFRPFQRR

Uniprot

H9JDQ6   A0A2H1W838   A0A437BYS3   A0A2A4JKM5   A0A0L7L5J4   A0A194RF59   + More
A0A194PR27   A0A212FGX4   A0A2W1BL79   A0A2J7PJ25   A0A1S4FPK8   A0A1I8PWU3   W5JTZ2   A0A0M4F004   A0A182GPU7   A0A2J7PJ36   A0A084WPZ6   A0A182FIW3   B0WGH7   A0A182QYE1   A0A336K8U2   B0W929   B4LF64   B4KVJ5   B3NH27   B4PFS1   B4QQP7   B3M4L7   Q9VTQ3   A0A3B0JR79   B4HF14   A0A2P8YLM8   Q2M0Z7   A0A1W4VUG1   B4GQW1   B4N3Z0   A0A182Y4Z4   A0A1B0BRE0   A0A1A9UVP5   A0A1A9YC33   A0A1B0AH18   A0A1B0G0U0   A0A0J9RU14   K7IZP1   Q16TK8   A0A182JEZ6   A0A182IDT3   A0A182PI35   A0A182NGH8   A0A182LID2   Q7QHY2   B4J3B1   A0A1A9X2X9   A0A1J1IFA4   A0A1B0D3V6   A0A2J7PJ08   X1XGR6   A0A3L8DHM1   A0A232EM43   A0A2S2PIR3   A0A3P8Z9K1  

Pubmed

19121390    26227816    26354079    22118469    28756777    20920257    + More
23761445    26483478    24438588    17994087    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    29403074    15632085    25244985    22936249    20075255    17510324    20966253    12364791    14747013    17210077    30249741    28648823    25069045   

EMBL

BABH01003155    ODYU01006636    SOQ48654.1    RSAL01000001    RVE55179.1    NWSH01001118    + More
PCG72511.1    JTDY01002873    KOB70564.1    KQ460473    KPJ14561.1    KQ459596    KPI95413.1    AGBW02008589    OWR52982.1    KZ150050    PZC74425.1    NEVH01024952    PNF16324.1    ADMH02000382    ETN66763.1    CP012525    ALC44387.1    ALC44484.1    JXUM01001860    KQ560129    KXJ84291.1    PNF16323.1    ATLV01025144    KE525369    KFB52290.1    DS231926    EDS26974.1    AXCN02002557    UFQS01000180    UFQT01000180    SSX00827.1    SSX21207.1    DS231861    EDS39466.1    CH940647    EDW70252.1    CH933809    EDW19466.1    CH954178    EDV51484.1    CM000159    EDW94220.1    CM000363    EDX10149.1    CH902618    EDV39416.1    AE014296    AAF49993.1    OUUW01000009    SPP84667.1    CH480815    EDW41183.1    PYGN01000508    PSN45156.1    CH379069    EAL30779.1    CH479188    EDW40146.1    CH964095    EDW79345.1    JXJN01019051    CCAG010021774    CM002912    KMY99107.1    CH477646    EAT37842.1    APCN01004793    AAAB01008811    EAA04963.5    CH916366    EDV97210.1    CVRI01000048    CRK98896.1    AJVK01011049    AJVK01011050    AJVK01011051    PNF16322.1    ABLF02023729    QOIP01000008    RLU19917.1    NNAY01003448    OXU19401.1    GGMR01016678    MBY29297.1   

Proteomes

UP000005204    UP000283053    UP000218220    UP000037510    UP000053240    UP000053268    + More
UP000007151    UP000235965    UP000095300    UP000000673    UP000092553    UP000069940    UP000249989    UP000030765    UP000069272    UP000002320    UP000075886    UP000008792    UP000009192    UP000008711    UP000002282    UP000000304    UP000007801    UP000000803    UP000268350    UP000001292    UP000245037    UP000001819    UP000192221    UP000008744    UP000007798    UP000076408    UP000092460    UP000078200    UP000092443    UP000092445    UP000092444    UP000002358    UP000008820    UP000075880    UP000075840    UP000075885    UP000075884    UP000075882    UP000007062    UP000001070    UP000091820    UP000183832    UP000092462    UP000007819    UP000279307    UP000215335    UP000265140   

PRIDE

H9JDQ6    Q9VTQ3   

Pfam

PF14061   Mtf2_C        + More
PF06916   DUF1279
PF03587   EMG1

Interpro

IPR033192   CCDC151        + More
IPR025894   Mtf2_C_dom       
IPR019786   Zinc_finger_PHD-type_CS       
IPR013083   Znf_RING/FYVE/PHD       
IPR001965   Znf_PHD       
IPR019787   Znf_PHD-finger       
IPR011011   Znf_FYVE_PHD       
IPR009688   DUF1279       
IPR029026   tRNA_m1G_MTases_N       
IPR005304   Rbsml_bgen_MeTrfase_EMG1/NEP1       
IPR029028   Alpha/beta_knot_MTases       

SUPFAM

SSF57903   SSF57903        + More
SSF75217   SSF75217       

Gene 3D

3.30.40.10     3.40.1280.10    

ProteinModelPortal

H9JDQ6   A0A2H1W838   A0A437BYS3   A0A2A4JKM5   A0A0L7L5J4   A0A194RF59   + More
A0A194PR27   A0A212FGX4   A0A2W1BL79   A0A2J7PJ25   A0A1S4FPK8   A0A1I8PWU3   W5JTZ2   A0A0M4F004   A0A182GPU7   A0A2J7PJ36   A0A084WPZ6   A0A182FIW3   B0WGH7   A0A182QYE1   A0A336K8U2   B0W929   B4LF64   B4KVJ5   B3NH27   B4PFS1   B4QQP7   B3M4L7   Q9VTQ3   A0A3B0JR79   B4HF14   A0A2P8YLM8   Q2M0Z7   A0A1W4VUG1   B4GQW1   B4N3Z0   A0A182Y4Z4   A0A1B0BRE0   A0A1A9UVP5   A0A1A9YC33   A0A1B0AH18   A0A1B0G0U0   A0A0J9RU14   K7IZP1   Q16TK8   A0A182JEZ6   A0A182IDT3   A0A182PI35   A0A182NGH8   A0A182LID2   Q7QHY2   B4J3B1   A0A1A9X2X9   A0A1J1IFA4   A0A1B0D3V6   A0A2J7PJ08   X1XGR6   A0A3L8DHM1   A0A232EM43   A0A2S2PIR3   A0A3P8Z9K1  

KEGG

101741773    no KO assigned | (RefSeq) hyaluronan-mediated motility receptor

GO

GO:0046872   GO:0031514   GO:0044297   GO:0048060   GO:0035253   GO:0097542   GO:0003341   GO:0070286   GO:0008168  

PANTHER

PTHR46518   PTHR12636  

Length:

563

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00084

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00174

outside

1  -  563

 

 

Pi

258.615313

Theta

178.303881

Tajima's D

1.069954

CLR

0.298804

CSRT

0.681065946702665

Interpretation

Uncertain