SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO08680
Pre Gene Modal
BGIBMGA007932
Annotation
PREDICTED:_uncharacterized_protein_LOC101741920_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.491
 

Sequence

CDS
ATGAAATTGTCATGCCGGGCCTTAGTGATATCGATTCTTAGGAGCCGGAGCGAGTTCCTAGGATGTGTCTCGTTCCAGTTGAAAGATGCTATTGAGTGCGACATCAAGGGCACCTACTTCCTGCAGCAAAACGCGGGGCGTGGCCTCAACGCTGCACCGCTGGCACATGAGAGAGCCGGCGATCGTGTAGCCGAAGTCGAACGACCCAAGATGGCCACCGACAACATTGAGACCAGCACCAACGATGGAACCAAAGAGAACCACAACGATAAAGGTGTTACAAATGGTCCCTCCGCGACCACAGCCAGTCAGGCCCAGGCGGTAGCCGCAGCACTACAAAGAGAAGCGGACGAACACCTCTTCCTACGATACTTGGAGCTGGACCCTCCGGATGATCCATCGGCTCCGAGACGGCCCCAACGGAATGGCAGAACCCCGTTCACCACAACTAGAAAACTCCTAAGGGGTACTGCAGGTGGTTTTGGTTTCACCGTAGTATGGACCAGACCACCAAGAGTCGAAAGGGTTGCCCAAGGGGGCTCTGCAGAAAGAGCCGGACTGAGAGCCGGAGATTACATTGTGTTTGTTGGCTCGAAGAACGTCGTCACAGCATCTGAAGAAGAAGTTAGAAATCTTGTGAAGTCCGCAGGCCAGATACTCCAATTGGAGACATTTAGAAGGGTACCGCCCAATGGAGTCGGCGTTAGGCCGAGGCTAGCTCAGGTGTCAATACCCCCGCCAGAGTCGACACCGCCACCCCCACCACGGTCACCACGTGGCAACGCTCTGGCGTCACCCGCCACGGCCGCGCGACCCCCAACCGCCTGCTCTTCGACCAGCCAGTCTCTGGACCGCCGCAAACTGCACCTACCCCAGGTCACCTTCTCGAAGGAGACCCCAGGACTATCAAGAGATGGCAGGAAACGGGCACTCTTGGCAGTGGTAGCCAGGGAGCAGCACTATGCCACGTGCCTCCAGTTCGGACTAGTGAGGTTCGTGTCGCCACTAGCAGAGAGGGCAGACCTCATCACACCGAGCGACCACCAGCTGCTATTTCAAAACTTGGAAGAGATATTTCGGCTCTCAGAAGACATCCTGGATCAAGTGGTGCAAGACGACGGTGAGATTCAGACGTCTACAGTGGTCGCCGTTTACTTGCAAAAAACGCCCGTATTTCTCAGCTTATACAAGAAATACTGCCTTGGACTGAAGAGGGCCGATTGTGTGTTGGTGAAGAAATCAAAAGACCCCAGCGGAGCATTTTCCCGGTTCTGCACCAGTCCTCCGATACCCCGTAGAAGACCAGACATCACGTCCCTAGTTCACAAGCCTCTAGAACAGTTCAGAGAGTTGTTGAGGTTAATGCGAACAGCCGCGTCTGCCACCGGCGCTGGTCCCTACGATCAGCTCGAGAAGAAGCAACTCCAGTTGATTGTAGAACAGTTACAGGGTAGCTATCAAGATGTCACCGCTGGCTCCGGGCTGATGGGGCTGGCTGGTGATGGGAAGCCCCTGCTGTCAGTTGCTGATTTAGAAAGCAGACTCGTGTTCACTAGGTGTAAGCCATTCGTCCTAAGCACAGCTGGGCGTCAGTGGATATTTGGAGGCGAGCTCTCTAGGGTGGAAGGTCGCGCAGTCAGACCATACTGGGCACTGTTGTTTAGTGACCTCCTACTGTTTGCGACGGTCTCGCGTGATAGAGTGCTGTTCGTAACGGAGGAGCCTGTCGCTCTGGGGGCCGTGTCTGAAGCACAGTTTAATCTAAGAAAAAAAGTAACGGAGTTTCGTCTAATCTTGGGTCGCGTAGGAGGAGAATCGCCATTAGTGTCGTGTGCTCCTCGCACTCCAGGTCGAACACGTACATTGGTTCTTCGAGCACCATCGATAGACTTGAAAGCTGTTTGGCAAAGCCTACTACAAAGGCAGATATATCGAGCGCATACCATGTCCGGTACTCCGTTGGGCTCACCGCTGGATTCTCCTGACCCACAGCTTACATTCTCCCTTGCTACCCTCGACTCGCAGCTGCGTCAGACGCGACGAAGCTCAGCCGAAACTCAAACAGCTGCTGGCGGGAGTGCAGTGGATGTAGCTAGAAGTATAAGAAGCAAAGGCTCTTCACAACACCTGCAAAGGTGGATGACGCAGTTACCCGAAACTGAAGAACTGGATCCACCGGAACCGGATGTAGAAACATGGAGTGTAGAAGAATTAAGAAAGAGATCAAAAGAGCTTAATCTACTTGAAGTAGCCGAACTCGTCGTTAATCATGAAAGTAAAGGAGCTTCTCCAAGTGAGAAAAAGGAAAATGATAGAAGTCCGTCGAAAAGTAGTAATTCTGGTAGCCAAATAACAGTTCGAACTAGTCCTGTAGTAGTCGATACAATTCCAGTACAGTGTGTGATAGCTCAGGAAAAATACATCAATGAAGTAAAATGCGTGGAAAACATTACAGTTACTAGAACTAGAGCATCAACGAATCACGCGGAGCCGACTTCTGCCAAAGAAGACCAATTGACGAGGCAGAAGGCCGAAAACGTGCTTAACAAGGTTTTAGGAATGAACATCGTTGCCAAAAGAGAAAACCTTGGATCATGCTTACAAACATCATCTGTTTTTTTGGATGATGACTCTATACATGAAGAAGATATCGATTTCAAAATAGAAAGAGGTCTAAGAAGATCTCCAAGAATGGGTACATCAGTTCTTAGTAAAATGAATGGCGATATAACTAATAAGACTGAGAAATCTGACTCGAACGTTAACTTGAACACATCCGAAGCAGGGTCCGATGAAGATTTAGAACTAGGACCTCTCATGTTAATGGGACTGTCAGCTATCAATCCGACTGCACATTTAATGCGAGTAGAACCATTTAATAGATCCTCTGTCACTGCTGGCCATAATCCAGGCTCAAGACCAGGGAGTCTATGCTCGATTAAATCGGAATCACCAGTTCCTAATATAGCTGTTGTGCCACCGACACCAGACTTCAATTTTTCTAATAAGACTGATGACCATTTAGATGAATCGCCGGACTCCCCAGATATCCCTGAAGATCTACCTTATGTTTCACTTAAAAGGTATGGCACTATGTCTAGCCTTGAGAGATTACCATCCGACGAAACTGATGATGGTAACGTTAGATTAACTGCACAAGAACCGGAAGCAATTAAAACAAATAGTACAGTAGTTGGAGCTGCCGGAGGTATAATGGGCTGGACGGCAAGAGCAGGCTCATTTGTAGTTGAGAAAATGAACATATTTAGTTATACCGAAAGTGTACCCAATACTGCTGTAGCACACAAACAACCATCATTCTTGGAAAGGTGTCTCGGGGTCAGTGACTGGAAATCGACAATCGGAACGGAAGAGGGTACTGGAGAAACCGGCGAAGGGAGCGGTGCTAGCGGCGAAGAAGCTTGGGGTACACCTTCATCAGGCGACTTGTCTGATAACCTACCAGATTCAGATCATGGAACTCTTTCGTCGTCATCTTCATATGCGGGAGATGACGATACAGAACTAATGATGGATGAACTTCTGATGGCGCCCACTATAACTGGACCTACCACTTTAAGGCCATTGCTGCCAAGAGATGTTTTTAGAAGAAGACTAGAACCACTATTAGAAGAAGAGTTCTCAGATAGTGGCAGCGAAGACAATAAACCTACCCCCACCAATTCTGACGACCAGGGCAGCGGGCGTGGCCTCGATGCTGACGTCTGTTGCGACGCGCCGCACCGGCCACCCTCTGCTTCCGGGTCAGAAGCAGAGGGAGGGGGTGCGGACGCCGCTCCAGTTGCTGGAGGGGAGGTCCATGGTGGGGACGAGTTCGATCTGAGCCCAGATCGAACTCCCACCAACGAAGTGCCTTCGACGCCCTTACAATATGTTTCAAAAGAGTTTGCGGAGGTGCGTGCCACTGCCTCTGCTGGAGGACGCCGGGACTCAGCCAGCTCAGCCAGCACCCCTTCCACACTCGACCGTACCACTATACACAACCCCACGACCCTTCCACAACAATCACCAGTTTTGGAGCCAGCACCAGTACTGGAGGTGTCTTCACAACCGGAACGTCCACTGACGCCGGAGCGACTCAGTCCTCGAGCGGAGATGAGGTTGGCGCTGGACCAGGGGACGGATATGCTGGCAGAACAGGAGGCATCTTGGGGTGGCGGGTCCGGCCGCTGGTCGTTTCGCGCGGCGTGTCAGAAGTCACTGCTGCGTCGCGTGGCGAGCGCGGACGCCGTGGCTCTGTGCCGCGCGCCCCCCCACCGCACCGCCCCTCATACTACTTCGCGCAGTTCTGTATATGCCTGGAAGGATCCAGAAAGCGAAACGAAAACAATGGAGATGGAGGAACTGGCACGAGTGGAAGCTCAGATGATGCGTTCGCGGACGCGCTCTCTATGCCAGAACGGGAAGATCAGAATGGGTTTCCTTCGGCGCCGCGCGTCGTCCGATAGCCCGCGCCGTGAGCCGTTGGACGTGGGACGGCCTTTCTCTCCGCGGCGGACGCACGAGAAGCAATTTGAGAAGAGATTCTGGAAACAAGTGACTAGAAGGCGACTATCTTTGGGTTCCGTCAGTCAGATATAA
Protein
MKLSCRALVISILRSRSEFLGCVSFQLKDAIECDIKGTYFLQQNAGRGLNAAPLAHERAGDRVAEVERPKMATDNIETSTNDGTKENHNDKGVTNGPSATTASQAQAVAAALQREADEHLFLRYLELDPPDDPSAPRRPQRNGRTPFTTTRKLLRGTAGGFGFTVVWTRPPRVERVAQGGSAERAGLRAGDYIVFVGSKNVVTASEEEVRNLVKSAGQILQLETFRRVPPNGVGVRPRLAQVSIPPPESTPPPPPRSPRGNALASPATAARPPTACSSTSQSLDRRKLHLPQVTFSKETPGLSRDGRKRALLAVVAREQHYATCLQFGLVRFVSPLAERADLITPSDHQLLFQNLEEIFRLSEDILDQVVQDDGEIQTSTVVAVYLQKTPVFLSLYKKYCLGLKRADCVLVKKSKDPSGAFSRFCTSPPIPRRRPDITSLVHKPLEQFRELLRLMRTAASATGAGPYDQLEKKQLQLIVEQLQGSYQDVTAGSGLMGLAGDGKPLLSVADLESRLVFTRCKPFVLSTAGRQWIFGGELSRVEGRAVRPYWALLFSDLLLFATVSRDRVLFVTEEPVALGAVSEAQFNLRKKVTEFRLILGRVGGESPLVSCAPRTPGRTRTLVLRAPSIDLKAVWQSLLQRQIYRAHTMSGTPLGSPLDSPDPQLTFSLATLDSQLRQTRRSSAETQTAAGGSAVDVARSIRSKGSSQHLQRWMTQLPETEELDPPEPDVETWSVEELRKRSKELNLLEVAELVVNHESKGASPSEKKENDRSPSKSSNSGSQITVRTSPVVVDTIPVQCVIAQEKYINEVKCVENITVTRTRASTNHAEPTSAKEDQLTRQKAENVLNKVLGMNIVAKRENLGSCLQTSSVFLDDDSIHEEDIDFKIERGLRRSPRMGTSVLSKMNGDITNKTEKSDSNVNLNTSEAGSDEDLELGPLMLMGLSAINPTAHLMRVEPFNRSSVTAGHNPGSRPGSLCSIKSESPVPNIAVVPPTPDFNFSNKTDDHLDESPDSPDIPEDLPYVSLKRYGTMSSLERLPSDETDDGNVRLTAQEPEAIKTNSTVVGAAGGIMGWTARAGSFVVEKMNIFSYTESVPNTAVAHKQPSFLERCLGVSDWKSTIGTEEGTGETGEGSGASGEEAWGTPSSGDLSDNLPDSDHGTLSSSSSYAGDDDTELMMDELLMAPTITGPTTLRPLLPRDVFRRRLEPLLEEEFSDSGSEDNKPTPTNSDDQGSGRGLDADVCCDAPHRPPSASGSEAEGGGADAAPVAGGEVHGGDEFDLSPDRTPTNEVPSTPLQYVSKEFAEVRATASAGGRRDSASSASTPSTLDRTTIHNPTTLPQQSPVLEPAPVLEVSSQPERPLTPERLSPRAEMRLALDQGTDMLAEQEASWGGGSGRWSFRAACQKSLLRRVASADAVALCRAPPHRTAPHTTSRSSVYAWKDPESETKTMEMEELARVEAQMMRSRTRSLCQNGKIRMGFLRRRASSDSPRREPLDVGRPFSPRRTHEKQFEKRFWKQVTRRRLSLGSVSQI

Summary

Pfam
PF00168   C2        + More
PF16056   DUF4799
PF00621   RhoGEF
PF00595   PDZ
Interpro
IPR032057   DUF4799        + More
IPR011993   PH-like_dom_sf       
IPR036034   PDZ_sf       
IPR000008   C2_dom       
IPR035892   C2_domain_sf       
IPR001478   PDZ       
IPR000219   DH-domain       
IPR035899   DBL_dom_sf       
SUPFAM
SSF48065   SSF48065        + More
SSF50156   SSF50156       
Gene 3D
PDB
2DLS     E-value=0.00064898,     Score=107

Ontologies

Topology

Length:
1533
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.02153
Exp number, first 60 AAs:
0.00042
Total prob of N-in:
0.00119
outside
1  -  1533
 
 

Population Genetic Test Statistics

Pi
233.268085
Theta
195.535512
Tajima's D
0.248706
CLR
0.34433
CSRT
0.439478026098695
Interpretation
Uncertain
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