Gene

KWMTBOMO08679  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA007649

Annotation

PREDICTED:_uncharacterized_protein_LOC101742065_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr15(+):2052167-2075548      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.173

CDS

ATGGCGTTCGTATTGTATATTTTGGCGGGCCTCCTGTTATCTGCGCACGCGCAATCGAACTACGGCTCCCAGGCCAACAACATCGAGTACCAAGGGGAAGGGCTGCCCGAACAAACTGTACTAGATGGAAAGGTCACGAAGCTGGACGACTTGAGTCCAGTTATCTTCTTGAACAGAACCAAAGCGGCACTGAACTGCGCTGCGGGTTCCATGCAGAACCCTCTGCGAGTATTCACGAACAACATAGTTGTAAGATTCCATCCTGGCTTAGAGATGGACGGAGACGAGGTCATCACAATCGTTTGTCGGTACCCACCGCCCATCGTTCCTAAGCCAGTCTTCAACCCGCTTATTGCCACTCCTGAACGCGGGCCGCTACCAGCGAAGGCTCCTTTAGCAGGAACGCATATCCTGATGATAATCTGCGCAATATTGTTTTTAACACTGCTGCTGCTTGGACTCGGAGTCTCATACTTGTGTCTGAGAAGACGCGCCTTGCCCGCTCCGAGGAGACTGATTGACGACTCCTCAGCGTCGATTGTGAGCAGAGAAAGTATACAAGAAGTGAAGATTCCTCGTGCACATCCTGTATACCCAATAGGCGGAGAGGCTGCGAGCGTGGCTTCGGATACCATTCCATCGGATTATCCATCAGAGACTCCCAGCGAGACCGACGCCGCTCATGCCAACCATGCTTTCATTATGGACGAAAACTATCACAGTGAAGGATATGGTGAAGCCCACGAGACTAGCGCTTCGAACGTGCTAGTGCACGCGGCGCCGCCCGCGTTCGACGTGCGCGTTCGCGTCCAGCGCCCCCCCGCGCCCCCCTCCCCGCAATCCACCATCACTACCACCGAGGTCGATGGTGGAAGCATGCGACACAGCAGCTACTTAGAGGAGCAAGCGCGGCAGGAGTCGGTCCGCACGGTGTCCCCGGTGGCGCTGCCGCTGCCCGCCCGCGCCGCGCAGCTGCCCCCGCCCGAGCGCCCCCCGCGCCCCCCCGCGCTCTATTCCCAGGTCAACAGAGAACGACAGGAGTGGTCGCGGCGGCCGCGGTCCATTGCCTCCCTCAACACGGAGATGACCGACACTCACTCGGTCACCGAAGTCACCGACAGGTCGCATGCTAGAATGTTCCATCTCAAGAAACCGCCCCCACCACCGCCGGTGATGAACGAACGTCTGGTGACGGAGGAACAGGAAGTAACGATGGAGAGCCTCGAGCCTCTTCCGGAGACACCCATCATGCCGGCCAGGAAGCCGGAGGTTACTTCACATGTCGTTGACGACGTGTTCCTGCGCACCATCACGGAAAAGAAGACCATCGAAGATGTCGAGCGACACAAGCGTCTCGTCACTGAATATAAACAGGTGCCGGCGCCGCCACCCCAGTTCGACGTGACGATCCGTAACCACACGGCCCCAGAGCCGCAGTGGGAGAACTTCTCGGACATAAGCAGCGCTTCCGGGATGACGCTGACGCCCAAGATGGAACGGGTACCGCTCTCGCTGCCCCCGCAGAAGATTATCGGCAAAGGGGGCCCGGACCTGTTCTCCCCGGAGTTGATCAAGCAGACGACTCATGTGTACCAGTCGCCGTCTTCTGCCGACCTCCCACTCCTGCCCGAGCTGCCTCCAGCCCGGAACCCTCTCTACAGGGACGAGGACGACGAGGATGTGCCGGAGCCGATTCCCGCACCACCAGTTCCAGCTAACTGGAGCGTTCTGACTAGAGTACTGAAAACTGAAGCTCAAGATGAGGTCCTGTTGGACTCGGAGCGCTCTCTGCGGCTGACGCGCGACGAGCGCCTCCGCTGGCGCGAGGTGATCACGCACGAGAGCACCCTGCGCCGCTCGTTGGCGCGTTCCTCCACCAGAGAGGACTTCACCAGAGTCGCCCACGACCAGCGCTACGCTCCCCTCTACACGCCTCACAAGTGGGACGTGATCATACGTATACTAGCGCCGCCCCACGACAAGCCGAAGAACCGCTACCGCAAGAAGACGGAGTGGGACTCCCGCTCCCGGCGTAGCTCGCTGCCGACGCTGTACGAGTATGACAGCGACGCCACGTCCCTGCGCGACCCGCAGCGCTCCCGCCGCTCCTCCTACCGAAGCGACCACGTTGACATGAGGTCGATGTCCGAAATGATGGTGGACTACGCGAGAGAGCAGGCGGACACGCACAGCGAAGTCTCCGGGGGAACTCAGCTCGGCAGGTACTACGATGACGACAGCGACTCCGAACATCCCTTCCATAATAACCAGTCGTGGTCCCGTCACTCTCTACACCGTTCAGCGAGTCAGCCGTCATTGGCGCGCTCCGCTACTGAAGTGGTGGAGCAGTGGACGGCGCCCGAGGGTGACGTCACACCCACACCGGGACGCAGGCTTAGAGGTCCTCAAGGCCTCACGACATTTACATCGTCTGAAGTACGAACGTTCCAAGCGACCTCCAGGGAATGGCGCGACTAA

Protein

MAFVLYILAGLLLSAHAQSNYGSQANNIEYQGEGLPEQTVLDGKVTKLDDLSPVIFLNRTKAALNCAAGSMQNPLRVFTNNIVVRFHPGLEMDGDEVITIVCRYPPPIVPKPVFNPLIATPERGPLPAKAPLAGTHILMIICAILFLTLLLLGLGVSYLCLRRRALPAPRRLIDDSSASIVSRESIQEVKIPRAHPVYPIGGEAASVASDTIPSDYPSETPSETDAAHANHAFIMDENYHSEGYGEAHETSASNVLVHAAPPAFDVRVRVQRPPAPPSPQSTITTTEVDGGSMRHSSYLEEQARQESVRTVSPVALPLPARAAQLPPPERPPRPPALYSQVNRERQEWSRRPRSIASLNTEMTDTHSVTEVTDRSHARMFHLKKPPPPPPVMNERLVTEEQEVTMESLEPLPETPIMPARKPEVTSHVVDDVFLRTITEKKTIEDVERHKRLVTEYKQVPAPPPQFDVTIRNHTAPEPQWENFSDISSASGMTLTPKMERVPLSLPPQKIIGKGGPDLFSPELIKQTTHVYQSPSSADLPLLPELPPARNPLYRDEDDEDVPEPIPAPPVPANWSVLTRVLKTEAQDEVLLDSERSLRLTRDERLRWREVITHESTLRRSLARSSTREDFTRVAHDQRYAPLYTPHKWDVIIRILAPPHDKPKNRYRKKTEWDSRSRRSSLPTLYEYDSDATSLRDPQRSRRSSYRSDHVDMRSMSEMMVDYAREQADTHSEVSGGTQLGRYYDDDSDSEHPFHNNQSWSRHSLHRSASQPSLARSATEVVEQWTAPEGDVTPTPGRRLRGPQGLTTFTSSEVRTFQATSREWRD

Uniprot

H9JDQ2   A0A2W1BND4   A0A2H1VVX1   A0A194RF69   A0A2A4K386   A0A437BXQ0   + More
A0A2A4K482   A0A212EYN9   A0A194PW95   A0A0L7LIL4   A0A0T6BHY3   A0A1Y1L8M7   N6U649   D6X4H8   A0A1L8D9T4   A0A1W4XF86   A0A1S4G1S4   Q1DH69   A0A1Q3FZ77   A0A1B6H0M5   A0A182QMD4   A0A182XA27   A0A182UX27   A0A182HL06   Q7PXN0   A0A1B6DU50   A0A1B0DCF3  

Pubmed

19121390    28756777    26354079    22118469    26227816    28004739    + More
23537049    18362917    19820115    17510324    12364791    14747013    17210077   

EMBL

BABH01003193    BABH01003194    KZ150060    PZC74240.1    ODYU01004761    SOQ44987.1    + More
KQ460473    KPJ14571.1    NWSH01000177    PCG78715.1    RSAL01000001    RVE55184.1    PCG78714.1    AGBW02011461    OWR46612.1    KQ459596    KPI95405.1    JTDY01000990    KOB75184.1    LJIG01000453    KRT86487.1    GEZM01063240    JAV69168.1    APGK01041016    KB740987    KB631964    ENN76121.1    ERL87528.1    KQ971380    EEZ97267.1    GFDF01010856    JAV03228.1    CH899795    EAT32504.1    GFDL01002174    JAV32871.1    GECZ01001571    JAS68198.1    AXCN02001522    APCN01000876    AAAB01008987    EAA00847.5    GEDC01008097    JAS29201.1    AJVK01014014   

Proteomes

UP000005204    UP000053240    UP000218220    UP000283053    UP000007151    UP000053268    + More
UP000037510    UP000019118    UP000030742    UP000007266    UP000192223    UP000008820    UP000075886    UP000076407    UP000075903    UP000075840    UP000007062    UP000092462   

PRIDE

H9JDQ2   

Pfam

PF00100   Zona_pellucida

Interpro

IPR001507   ZP_dom       

ProteinModelPortal

H9JDQ2   A0A2W1BND4   A0A2H1VVX1   A0A194RF69   A0A2A4K386   A0A437BXQ0   + More
A0A2A4K482   A0A212EYN9   A0A194PW95   A0A0L7LIL4   A0A0T6BHY3   A0A1Y1L8M7   N6U649   D6X4H8   A0A1L8D9T4   A0A1W4XF86   A0A1S4G1S4   Q1DH69   A0A1Q3FZ77   A0A1B6H0M5   A0A182QMD4   A0A182XA27   A0A182UX27   A0A182HL06   Q7PXN0   A0A1B6DU50   A0A1B0DCF3  

KEGG

101742065    no KO assigned | (RefSeq) uncharacterized LOC101742065

GO

GO:0016021  

SignalP

Position:   1 - 17,         Likelihood:  0.995839

 

 

Length:

825

Number of predicted TMHs:

1

Exp number of AAs in TMHs:

24.26099

Exp number, first 60 AAs:

1.60167

Total prob of N-in:

0.84566

inside

1  -  136

TMhelix

137  -  159

outside

160  -  825

 

 

Pi

264.621529

Theta

162.294354

Tajima's D

1.802421

CLR

0.510429

CSRT

0.848707564621769

Interpretation

Uncertain