Pre Gene Modal
BGIBMGA007645
Annotation
ribosomal_protein_S23_[Bombyx_mori]
Full name
40S ribosomal protein S23
Location in the cell
Cytoplasmic Reliability : 1.848 Mitochondrial Reliability : 1.338 Nuclear Reliability : 1.42
Sequence
CDS
ATGGGTAAACCCCGAGGAATACGAACGGCGCGTAAGCACGTGAACCACCGTCGTGAACAGCGATGGGCGGACAAAGAATTCAAGAAAGCCCACATGGGTACGAAATGGAAGGCTAACCCTTTCGGTGGTGCATCTCACGCAAAGGGCATCGTCCTCGAGAAAGTTGGTGTAGAAGCTAAGCAGCCCAACTCTGCCATCCGCAAATGCGTCCGTGTACAGCTCATTAAGAACGGAAAGAAAGTGACCGCATTCGTCCCCCGTGACGGTTGCCTAAACCACATCGAAGAAAACGACGAAGTACTAGTGGCGGGATTCGGTCGTAAAGGTCACGCCGTCGGTGACATTCCCGGAGTTCGTTTTAAGGTGGTAAAAGTAGCCAACGTGTCTCTCCTCGCTCTCTACAAAGAGAAAAAGGAGCGACCAAGATCATAG
Protein
MGKPRGIRTARKHVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNHIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
Summary
Subunit
Component of the 40S small ribosomal subunit.
Similarity
Belongs to the universal ribosomal protein uS12 family.
Keywords
Cytoplasm
Endoplasmic reticulum
Hydroxylation
Ribonucleoprotein
Ribosomal protein
3D-structure
Complete proteome
Reference proteome
Feature
chain 40S ribosomal protein S23
Uniprot
Q66SV4
Q5MGJ7
A0A291FJ93
D1LYN9
A0A212F8S5
G0ZED2
+ More
A0A2W1BGN7 A0A2A4J7R1 I4DM66 A0A437BXK1 A0A0K8S4J1 A0A343EU26 E7DZ13 I4DIG0 A0A3G1T1J0 Q962Q7 Q6EV23 A0A2H1WSW0 A0A0N1IQ52 H9JDP8 E0W3Z4 Q4LB05 Q4GXN9 D6WCS4 Q6EUX7 A0A0T6BEC1 A0A1B6C8R5 A0A1Y1MAM6 Q6EUX6 J3JTS1 A0A1B6H402 A0A1B6JI88 Q6F432 A0A1B6MT00 A0A0V0G2P1 R4WCS7 R4G521 Q1W2A5 Q4LB07 A0A161M8M9 A0A1W4XIH2 Q4LB06 A0A0D3LYC8 A0A067RG36 A0A2P8YQ40 A2I416 D1M7Z4 A0A226DEG2 A0A0A9YS08 A0A195D3P9 F4WKI0 A0A195BR15 A0A0J7L975 A0A158NQL0 E1ZXE6 A0A026WL02 E2BMH3 A0A2H8TT13 C4WY99 A0A1D1YRT6 W8C1M7 A0A026WIX0 Q0PXY3 D2DT26 A0A1W4VDQ2 A0A1L8DRZ7 B4LLE1 A0A1B0GC15 B4KRC2 A0A1A9YTC0 A0A3B0JUC5 A0A1A9V7N6 A0A0K8W2E3 A0A1B0AM46 Q28XH3 B4GG48 A0A034VDL6 B4P6N7 A0A1I8PP40 B3MCY5 B4MPQ7 A0A0L0CBM9 B4HR27 B4J7M4 B3NR75 A0A1B0AK94 A0A1A9WND3 B4QFE2 T1PCP3 A0A0B4LFD9 Q8T3U2 V9IJ14 A0A088A2A5 A0A2R7WSA3 B0FWR0 Q6XHD8 A0A195DHX3 A0A195EQV7 A0A151XAW2 A0A336LNZ5
A0A2W1BGN7 A0A2A4J7R1 I4DM66 A0A437BXK1 A0A0K8S4J1 A0A343EU26 E7DZ13 I4DIG0 A0A3G1T1J0 Q962Q7 Q6EV23 A0A2H1WSW0 A0A0N1IQ52 H9JDP8 E0W3Z4 Q4LB05 Q4GXN9 D6WCS4 Q6EUX7 A0A0T6BEC1 A0A1B6C8R5 A0A1Y1MAM6 Q6EUX6 J3JTS1 A0A1B6H402 A0A1B6JI88 Q6F432 A0A1B6MT00 A0A0V0G2P1 R4WCS7 R4G521 Q1W2A5 Q4LB07 A0A161M8M9 A0A1W4XIH2 Q4LB06 A0A0D3LYC8 A0A067RG36 A0A2P8YQ40 A2I416 D1M7Z4 A0A226DEG2 A0A0A9YS08 A0A195D3P9 F4WKI0 A0A195BR15 A0A0J7L975 A0A158NQL0 E1ZXE6 A0A026WL02 E2BMH3 A0A2H8TT13 C4WY99 A0A1D1YRT6 W8C1M7 A0A026WIX0 Q0PXY3 D2DT26 A0A1W4VDQ2 A0A1L8DRZ7 B4LLE1 A0A1B0GC15 B4KRC2 A0A1A9YTC0 A0A3B0JUC5 A0A1A9V7N6 A0A0K8W2E3 A0A1B0AM46 Q28XH3 B4GG48 A0A034VDL6 B4P6N7 A0A1I8PP40 B3MCY5 B4MPQ7 A0A0L0CBM9 B4HR27 B4J7M4 B3NR75 A0A1B0AK94 A0A1A9WND3 B4QFE2 T1PCP3 A0A0B4LFD9 Q8T3U2 V9IJ14 A0A088A2A5 A0A2R7WSA3 B0FWR0 Q6XHD8 A0A195DHX3 A0A195EQV7 A0A151XAW2 A0A336LNZ5
Pubmed
16023793
22118469
28756777
22651552
14668217
26354079
+ More
19121390 20566863 18362917 19820115 28004739 22516182 23537049 23691247 24845553 29403074 30926861 25401762 26823975 21719571 21347285 20798317 24508170 24495485 30249741 17994087 15632085 25348373 17550304 26108605 22936249 25315136 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 12537569 24550463 23636399 14525923
19121390 20566863 18362917 19820115 28004739 22516182 23537049 23691247 24845553 29403074 30926861 25401762 26823975 21719571 21347285 20798317 24508170 24495485 30249741 17994087 15632085 25348373 17550304 26108605 22936249 25315136 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 12537569 24550463 23636399 14525923
EMBL
AY706958
AY769338
AAU11821.1
AAV34880.1
AY829789
AAV91403.1
+ More
KY039978 ATG34157.1 GU084313 ACY95346.1 AGBW02009681 OWR50128.1 JF265010 AEL28841.1 KZ150060 PZC74232.1 NWSH01002505 PCG68125.1 AK402384 BAM19006.1 RSAL01000001 RVE55192.1 GBRD01017669 JAG48158.1 MF067300 ASM61897.1 HQ424716 ADT80660.1 AK401078 BAM17700.1 MG992418 AXY94856.1 AF400219 AJ783764 ODYU01010754 SOQ56062.1 KQ459781 KPJ19970.1 BABH01003223 DS235885 EEB20350.1 EEB20352.1 AM039997 CAJ01862.1 AM048984 CAJ17218.1 KQ971311 EEZ98852.1 AJ783894 CAH04342.1 LJIG01001252 KRT85688.1 GEDC01027653 JAS09645.1 GEZM01038559 GEZM01038558 JAV81610.1 AJ783895 CAH04343.1 APGK01055051 BT126630 KB741259 KB631924 AEE61593.1 ENN71689.1 ERL87232.1 GECZ01000354 JAS69415.1 GECU01008690 JAS99016.1 AB180672 BAD26702.1 GEBQ01000917 JAT39060.1 GECL01003722 JAP02402.1 AK416964 BAN20179.1 ACPB03001247 GAHY01000870 JAA76640.1 DQ445522 ABD98760.1 AM039995 CAJ01860.1 GEMB01000107 JAS03004.1 AM039996 CAJ01861.1 KJ472479 AHY30855.1 KK852705 KDR18014.1 PYGN01000438 PSN46372.1 EF070519 ABM55585.1 GU120418 ACY71268.1 LNIX01000025 MH602915 OXA42586.1 QBH73160.1 GBHO01007787 GBRD01014911 GDHC01012376 JAG35817.1 JAG50915.1 JAQ06253.1 KQ976885 KYN07535.1 GL888199 EGI65318.1 KQ976419 KYM89296.1 LBMM01000146 KMR04741.1 ADTU01023371 GL435038 EFN74123.1 KK107159 EZA56710.1 GL449233 EFN83082.1 EFN83098.1 GFXV01004927 MBW16732.1 ABLF02005586 AK343095 BAH72869.1 GDJX01010607 JAT57329.1 GAMC01000848 JAC05708.1 KK107182 QOIP01000011 EZA55933.1 RLU17159.1 DQ673403 ABG81976.1 FJ774865 ACY66586.1 GFDF01004913 JAV09171.1 CH940648 EDW61893.1 CCAG010018970 CH933808 EDW09338.1 OUUW01000001 SPP74678.1 GDHF01007100 JAI45214.1 JXJN01000341 CM000071 EAL26343.1 CH479183 EDW35468.1 GAKP01019082 JAC39870.1 CM000158 EDW90989.1 CH902619 EDV36300.1 CH963849 EDW74096.1 JRES01000644 KNC29637.1 CH480816 EDW47824.1 CH916367 EDW02172.1 CH954179 EDV56064.1 CM000362 CM002911 EDX07052.1 KMY93722.1 KA645723 AFP60352.1 AE013599 KX532076 AHN56208.1 ANY27886.1 AY089523 JR048309 AEY60627.1 KK855209 PTY21445.1 EU358100 ABY62742.1 AY232245 AAR10268.1 KQ980824 KYN12498.1 KQ982021 KYN30561.1 KQ982335 KYQ57523.1 UFQT01000039 SSX18501.1
KY039978 ATG34157.1 GU084313 ACY95346.1 AGBW02009681 OWR50128.1 JF265010 AEL28841.1 KZ150060 PZC74232.1 NWSH01002505 PCG68125.1 AK402384 BAM19006.1 RSAL01000001 RVE55192.1 GBRD01017669 JAG48158.1 MF067300 ASM61897.1 HQ424716 ADT80660.1 AK401078 BAM17700.1 MG992418 AXY94856.1 AF400219 AJ783764 ODYU01010754 SOQ56062.1 KQ459781 KPJ19970.1 BABH01003223 DS235885 EEB20350.1 EEB20352.1 AM039997 CAJ01862.1 AM048984 CAJ17218.1 KQ971311 EEZ98852.1 AJ783894 CAH04342.1 LJIG01001252 KRT85688.1 GEDC01027653 JAS09645.1 GEZM01038559 GEZM01038558 JAV81610.1 AJ783895 CAH04343.1 APGK01055051 BT126630 KB741259 KB631924 AEE61593.1 ENN71689.1 ERL87232.1 GECZ01000354 JAS69415.1 GECU01008690 JAS99016.1 AB180672 BAD26702.1 GEBQ01000917 JAT39060.1 GECL01003722 JAP02402.1 AK416964 BAN20179.1 ACPB03001247 GAHY01000870 JAA76640.1 DQ445522 ABD98760.1 AM039995 CAJ01860.1 GEMB01000107 JAS03004.1 AM039996 CAJ01861.1 KJ472479 AHY30855.1 KK852705 KDR18014.1 PYGN01000438 PSN46372.1 EF070519 ABM55585.1 GU120418 ACY71268.1 LNIX01000025 MH602915 OXA42586.1 QBH73160.1 GBHO01007787 GBRD01014911 GDHC01012376 JAG35817.1 JAG50915.1 JAQ06253.1 KQ976885 KYN07535.1 GL888199 EGI65318.1 KQ976419 KYM89296.1 LBMM01000146 KMR04741.1 ADTU01023371 GL435038 EFN74123.1 KK107159 EZA56710.1 GL449233 EFN83082.1 EFN83098.1 GFXV01004927 MBW16732.1 ABLF02005586 AK343095 BAH72869.1 GDJX01010607 JAT57329.1 GAMC01000848 JAC05708.1 KK107182 QOIP01000011 EZA55933.1 RLU17159.1 DQ673403 ABG81976.1 FJ774865 ACY66586.1 GFDF01004913 JAV09171.1 CH940648 EDW61893.1 CCAG010018970 CH933808 EDW09338.1 OUUW01000001 SPP74678.1 GDHF01007100 JAI45214.1 JXJN01000341 CM000071 EAL26343.1 CH479183 EDW35468.1 GAKP01019082 JAC39870.1 CM000158 EDW90989.1 CH902619 EDV36300.1 CH963849 EDW74096.1 JRES01000644 KNC29637.1 CH480816 EDW47824.1 CH916367 EDW02172.1 CH954179 EDV56064.1 CM000362 CM002911 EDX07052.1 KMY93722.1 KA645723 AFP60352.1 AE013599 KX532076 AHN56208.1 ANY27886.1 AY089523 JR048309 AEY60627.1 KK855209 PTY21445.1 EU358100 ABY62742.1 AY232245 AAR10268.1 KQ980824 KYN12498.1 KQ982021 KYN30561.1 KQ982335 KYQ57523.1 UFQT01000039 SSX18501.1
Proteomes
UP000007151
UP000218220
UP000283053
UP000053240
UP000005204
UP000009046
+ More
UP000007266 UP000019118 UP000030742 UP000015103 UP000192223 UP000027135 UP000245037 UP000198287 UP000078542 UP000007755 UP000078540 UP000036403 UP000005205 UP000000311 UP000053097 UP000008237 UP000007819 UP000279307 UP000079169 UP000192221 UP000008792 UP000092444 UP000009192 UP000092443 UP000268350 UP000078200 UP000092460 UP000001819 UP000008744 UP000002282 UP000095300 UP000007801 UP000007798 UP000037069 UP000001292 UP000001070 UP000008711 UP000092445 UP000091820 UP000000304 UP000095301 UP000000803 UP000005203 UP000078492 UP000078541 UP000075809
UP000007266 UP000019118 UP000030742 UP000015103 UP000192223 UP000027135 UP000245037 UP000198287 UP000078542 UP000007755 UP000078540 UP000036403 UP000005205 UP000000311 UP000053097 UP000008237 UP000007819 UP000279307 UP000079169 UP000192221 UP000008792 UP000092444 UP000009192 UP000092443 UP000268350 UP000078200 UP000092460 UP000001819 UP000008744 UP000002282 UP000095300 UP000007801 UP000007798 UP000037069 UP000001292 UP000001070 UP000008711 UP000092445 UP000091820 UP000000304 UP000095301 UP000000803 UP000005203 UP000078492 UP000078541 UP000075809
PRIDE
Pfam
PF00164 Ribosom_S12_S23
SUPFAM
SSF50249
SSF50249
ProteinModelPortal
Q66SV4
Q5MGJ7
A0A291FJ93
D1LYN9
A0A212F8S5
G0ZED2
+ More
A0A2W1BGN7 A0A2A4J7R1 I4DM66 A0A437BXK1 A0A0K8S4J1 A0A343EU26 E7DZ13 I4DIG0 A0A3G1T1J0 Q962Q7 Q6EV23 A0A2H1WSW0 A0A0N1IQ52 H9JDP8 E0W3Z4 Q4LB05 Q4GXN9 D6WCS4 Q6EUX7 A0A0T6BEC1 A0A1B6C8R5 A0A1Y1MAM6 Q6EUX6 J3JTS1 A0A1B6H402 A0A1B6JI88 Q6F432 A0A1B6MT00 A0A0V0G2P1 R4WCS7 R4G521 Q1W2A5 Q4LB07 A0A161M8M9 A0A1W4XIH2 Q4LB06 A0A0D3LYC8 A0A067RG36 A0A2P8YQ40 A2I416 D1M7Z4 A0A226DEG2 A0A0A9YS08 A0A195D3P9 F4WKI0 A0A195BR15 A0A0J7L975 A0A158NQL0 E1ZXE6 A0A026WL02 E2BMH3 A0A2H8TT13 C4WY99 A0A1D1YRT6 W8C1M7 A0A026WIX0 Q0PXY3 D2DT26 A0A1W4VDQ2 A0A1L8DRZ7 B4LLE1 A0A1B0GC15 B4KRC2 A0A1A9YTC0 A0A3B0JUC5 A0A1A9V7N6 A0A0K8W2E3 A0A1B0AM46 Q28XH3 B4GG48 A0A034VDL6 B4P6N7 A0A1I8PP40 B3MCY5 B4MPQ7 A0A0L0CBM9 B4HR27 B4J7M4 B3NR75 A0A1B0AK94 A0A1A9WND3 B4QFE2 T1PCP3 A0A0B4LFD9 Q8T3U2 V9IJ14 A0A088A2A5 A0A2R7WSA3 B0FWR0 Q6XHD8 A0A195DHX3 A0A195EQV7 A0A151XAW2 A0A336LNZ5
A0A2W1BGN7 A0A2A4J7R1 I4DM66 A0A437BXK1 A0A0K8S4J1 A0A343EU26 E7DZ13 I4DIG0 A0A3G1T1J0 Q962Q7 Q6EV23 A0A2H1WSW0 A0A0N1IQ52 H9JDP8 E0W3Z4 Q4LB05 Q4GXN9 D6WCS4 Q6EUX7 A0A0T6BEC1 A0A1B6C8R5 A0A1Y1MAM6 Q6EUX6 J3JTS1 A0A1B6H402 A0A1B6JI88 Q6F432 A0A1B6MT00 A0A0V0G2P1 R4WCS7 R4G521 Q1W2A5 Q4LB07 A0A161M8M9 A0A1W4XIH2 Q4LB06 A0A0D3LYC8 A0A067RG36 A0A2P8YQ40 A2I416 D1M7Z4 A0A226DEG2 A0A0A9YS08 A0A195D3P9 F4WKI0 A0A195BR15 A0A0J7L975 A0A158NQL0 E1ZXE6 A0A026WL02 E2BMH3 A0A2H8TT13 C4WY99 A0A1D1YRT6 W8C1M7 A0A026WIX0 Q0PXY3 D2DT26 A0A1W4VDQ2 A0A1L8DRZ7 B4LLE1 A0A1B0GC15 B4KRC2 A0A1A9YTC0 A0A3B0JUC5 A0A1A9V7N6 A0A0K8W2E3 A0A1B0AM46 Q28XH3 B4GG48 A0A034VDL6 B4P6N7 A0A1I8PP40 B3MCY5 B4MPQ7 A0A0L0CBM9 B4HR27 B4J7M4 B3NR75 A0A1B0AK94 A0A1A9WND3 B4QFE2 T1PCP3 A0A0B4LFD9 Q8T3U2 V9IJ14 A0A088A2A5 A0A2R7WSA3 B0FWR0 Q6XHD8 A0A195DHX3 A0A195EQV7 A0A151XAW2 A0A336LNZ5
PDB
4V6W
E-value=1.62887e-66,
Score=635
Ontologies
GO
PANTHER
Topology
Subcellular location
Cytoplasm
Detected on cytosolic polysomes (By similarity). Detected in ribosomes that are associated with the rough endoplasmic reticulum (By similarity). With evidence from 2 publications.
Cytosol Detected on cytosolic polysomes (By similarity). Detected in ribosomes that are associated with the rough endoplasmic reticulum (By similarity). With evidence from 2 publications.
Rough endoplasmic reticulum Detected on cytosolic polysomes (By similarity). Detected in ribosomes that are associated with the rough endoplasmic reticulum (By similarity). With evidence from 2 publications.
Cytosol Detected on cytosolic polysomes (By similarity). Detected in ribosomes that are associated with the rough endoplasmic reticulum (By similarity). With evidence from 2 publications.
Rough endoplasmic reticulum Detected on cytosolic polysomes (By similarity). Detected in ribosomes that are associated with the rough endoplasmic reticulum (By similarity). With evidence from 2 publications.
Length:
143
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0311
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.34540
outside
1 - 143
Population Genetic Test Statistics
Pi
56.673017
Theta
165.529761
Tajima's D
-1.892589
CLR
5674.8072
CSRT
0.0215989200539973
Interpretation
Uncertain
